Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS11880

Experiment: Ferulic Acid 2 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ferulic Acid 2 mM (C)
2,628,214	+		PFLU_RS11870	0.75	-0.8
2,628,214	+		PFLU_RS11870	0.75	+0.5
2,628,215	-		PFLU_RS11870	0.75	+1.6
2,628,220	+		PFLU_RS11870	0.76	+0.4
2,628,325	+				-1.5
2,628,325	+				+1.2
2,628,325	+				+0.6
2,628,325	+				-1.4
2,628,325	+				-1.7
2,628,325	+				-1.6
2,628,326	-				+0.9
2,628,326	-				-1.1
2,628,326	-				-0.2
2,628,326	-				+0.6
2,628,775	-		PFLU_RS11875	0.48	+0.6
2,628,839	-		PFLU_RS11875	0.56	-1.1
2,628,839	-		PFLU_RS11875	0.56	+1.7
2,628,870	+		PFLU_RS11875	0.60	-2.5
2,628,870	+		PFLU_RS11875	0.60	+0.5
2,628,870	+		PFLU_RS11875	0.60	+1.5
2,628,870	+		PFLU_RS11875	0.60	-2.7
2,628,870	+		PFLU_RS11875	0.60	+1.5
2,628,871	-		PFLU_RS11875	0.60	-1.6
2,628,871	-		PFLU_RS11875	0.60	+0.5
2,628,871	-		PFLU_RS11875	0.60	+0.5
2,628,871	-		PFLU_RS11875	0.60	+1.2
2,628,893	+		PFLU_RS11875	0.62	-0.1
2,628,894	-		PFLU_RS11875	0.62	+0.2
2,628,894	-		PFLU_RS11875	0.62	-0.4
2,629,080	-		PFLU_RS11875	0.85	-0.0
2,629,080	-		PFLU_RS11875	0.85	-0.2
2,629,305	-				+0.4
2,629,305	-				+0.9
2,629,327	+		PFLU_RS11880	0.12	+2.7
2,629,327	+		PFLU_RS11880	0.12	+0.1
2,629,328	-		PFLU_RS11880	0.12	+0.9
2,629,452	+		PFLU_RS11880	0.24	-0.3
2,629,596	-		PFLU_RS11880	0.37	+0.9
2,629,596	-		PFLU_RS11880	0.37	-0.1
2,629,635	-		PFLU_RS11880	0.41	-0.4
2,629,853	+		PFLU_RS11880	0.61	+1.4
2,629,853	+		PFLU_RS11880	0.61	+0.7
2,630,048	-		PFLU_RS11880	0.80	-1.0
2,630,261	+				-1.0
2,630,377	+		PFLU_RS11885	0.24	-2.0
2,630,548	-		PFLU_RS11885	0.57	-0.4
2,630,952	+				+1.8
2,631,123	+		PFLU_RS11890	0.15	-2.2
2,631,176	+		PFLU_RS11890	0.18	-2.3