Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS11805

Experiment: Ferulic Acid 2 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ferulic Acid 2 mM (C)
2,616,970	+				-0.9
2,616,971	-				-1.5
2,616,971	-				-0.4
2,616,990	+				-1.2
2,617,154	-		PFLU_RS11800	0.19	-0.9
2,617,371	+		PFLU_RS11800	0.43	-0.4
2,617,371	+		PFLU_RS11800	0.43	-0.5
2,617,371	+		PFLU_RS11800	0.43	+1.2
2,617,371	+		PFLU_RS11800	0.43	+0.8
2,617,371	+		PFLU_RS11800	0.43	-0.8
2,617,372	-		PFLU_RS11800	0.43	-0.8
2,617,498	+		PFLU_RS11800	0.58	+0.9
2,617,561	+		PFLU_RS11800	0.65	+1.1
2,617,570	+		PFLU_RS11800	0.66	-0.9
2,617,705	+		PFLU_RS11800	0.82	-0.5
2,617,765	+		PFLU_RS11800	0.88	+0.9
2,617,943	+				-0.8
2,617,943	+				+1.1
2,617,943	+				-0.8
2,617,943	+				+0.2
2,617,943	+				-2.5
2,617,943	+				-0.4
2,617,943	+				+1.4
2,617,944	-				-0.8
2,617,944	-				+0.2
2,617,944	-				-0.8
2,617,944	-				-2.1
2,617,944	-				-0.8
2,618,017	+		PFLU_RS11805	0.19	+2.1
2,618,017	+		PFLU_RS11805	0.19	+0.8
2,618,018	-		PFLU_RS11805	0.19	-2.9
2,618,035	+		PFLU_RS11805	0.24	+0.6
2,618,036	-		PFLU_RS11805	0.24	-2.6
2,618,044	-		PFLU_RS11805	0.26	+1.2
2,618,044	-		PFLU_RS11805	0.26	+0.1
2,618,113	+		PFLU_RS11805	0.44	+1.8
2,618,281	+		PFLU_RS11805	0.87	-0.4
2,618,281	+		PFLU_RS11805	0.87	+0.9
2,618,282	-		PFLU_RS11805	0.87	+4.0
2,618,282	-		PFLU_RS11805	0.87	+1.0
2,618,282	-		PFLU_RS11805	0.87	+1.6
2,618,282	-		PFLU_RS11805	0.87	+0.9
2,618,282	-		PFLU_RS11805	0.87	+1.1
2,618,282	-		PFLU_RS11805	0.87	-1.8
2,618,352	-				-1.4
2,618,352	-				-0.9
2,618,366	-				-1.1
2,618,366	-				+0.2
2,618,366	-				+1.1
2,618,381	-				-0.4
2,618,381	-				-2.1
2,618,381	-				+0.1
2,618,508	+				+0.2
2,618,543	+				-0.4
2,618,544	-				+0.9
2,618,544	-				-2.6
2,618,646	+				+0.7
2,618,646	+				-0.6
2,618,905	+		PFLU_RS11810	0.41	+0.9
2,618,905	+		PFLU_RS11810	0.41	-0.1
2,618,905	+		PFLU_RS11810	0.41	-0.2
2,618,906	-		PFLU_RS11810	0.41	-0.3
2,618,906	-		PFLU_RS11810	0.41	-2.1
2,619,075	+		PFLU_RS11810	0.62	-1.4
2,619,076	-		PFLU_RS11810	0.62	-0.8
2,619,076	-		PFLU_RS11810	0.62	+2.0
2,619,076	-		PFLU_RS11810	0.62	+0.4
2,619,076	-		PFLU_RS11810	0.62	-0.1
2,619,177	+		PFLU_RS11810	0.74	-1.2
2,619,177	+		PFLU_RS11810	0.74	-2.3
2,619,261	+		PFLU_RS11810	0.85	+0.3
2,619,261	+		PFLU_RS11810	0.85	-1.4
2,619,261	+		PFLU_RS11810	0.85	-0.0
2,619,261	+		PFLU_RS11810	0.85	+0.8
2,619,262	-		PFLU_RS11810	0.85	-1.4
2,619,262	-		PFLU_RS11810	0.85	-0.3
2,619,273	+		PFLU_RS11810	0.86	-0.4
2,619,274	-		PFLU_RS11810	0.86	+0.4