Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS03785

Experiment: Ferulic Acid 2 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ferulic Acid 2 mM (C)
864,950	+		PFLU_RS03780	0.59	+1.4
864,951	-		PFLU_RS03780	0.59	-2.4
865,049	+		PFLU_RS03780	0.64	+0.6
865,063	+		PFLU_RS03780	0.64	-0.4
865,117	-		PFLU_RS03780	0.67	-0.3
865,300	+		PFLU_RS03780	0.76	+1.9
865,300	+		PFLU_RS03780	0.76	+2.2
865,300	+		PFLU_RS03780	0.76	-0.3
865,300	+		PFLU_RS03780	0.76	+1.1
865,301	-		PFLU_RS03780	0.76	-0.5
865,301	-		PFLU_RS03780	0.76	+1.8
865,301	-		PFLU_RS03780	0.76	+0.7
865,316	+		PFLU_RS03780	0.76	+2.4
865,317	-		PFLU_RS03780	0.76	+0.7
865,464	+		PFLU_RS03780	0.83	+0.2
865,464	+		PFLU_RS03780	0.83	-1.1
865,464	+		PFLU_RS03780	0.83	-2.5
865,465	-		PFLU_RS03780	0.84	-0.9
865,465	-		PFLU_RS03780	0.84	+0.0
865,465	-		PFLU_RS03780	0.84	-1.3
865,533	+		PFLU_RS03780	0.87	+1.3
865,533	+		PFLU_RS03780	0.87	-1.4
865,533	+		PFLU_RS03780	0.87	-0.2
865,534	-		PFLU_RS03780	0.87	-2.0
865,592	+		PFLU_RS03780	0.90	+0.1
865,592	+		PFLU_RS03780	0.90	+0.8
865,592	+		PFLU_RS03780	0.90	+0.2
865,593	-		PFLU_RS03780	0.90	+0.6
865,593	-		PFLU_RS03780	0.90	+0.7
865,593	-		PFLU_RS03780	0.90	+0.8
865,593	-		PFLU_RS03780	0.90	+1.8
865,593	-		PFLU_RS03780	0.90	+3.0
865,848	+				-1.4
865,848	+				+0.4
865,848	+				-1.1
865,848	+				+1.1
865,848	+				+0.9
865,848	+				-1.8
865,848	+				+1.6
865,848	+				+0.9
865,848	+				-0.5
865,848	+				-1.9
865,848	+				-1.4
865,848	+				-0.3
865,848	+				-0.4
865,848	+				-0.2
865,848	+				+0.0
865,848	+				-0.1
865,848	+				+0.8
865,848	+				+0.5
865,848	+				+1.1
865,848	+				+0.5
865,848	+				+0.7
865,849	-				-1.2
865,849	-				+0.1
865,849	-				-1.2
865,849	-				-0.2
865,849	-				-2.3
865,849	-				-1.8
865,849	-				+0.9
865,849	-				-0.5
865,849	-				+0.9
865,849	-				+1.8
865,849	-				+0.3
865,849	-				-0.8
865,849	-				-0.5
865,849	-				-0.4
865,849	-				-0.5
865,849	-				-1.0
865,849	-				-1.0
865,849	-				-0.9
865,849	-				-1.0
865,849	-				-1.5
865,862	+				-0.5
865,862	+				+1.6
865,862	+				-1.4
865,863	-				+1.8
865,863	-				+0.5
865,863	-				+0.3
866,001	+		PFLU_RS03785	0.38	-1.9
866,001	+		PFLU_RS03785	0.38	-1.0
866,001	+		PFLU_RS03785	0.38	+0.4
866,001	+		PFLU_RS03785	0.38	-0.2
866,001	+		PFLU_RS03785	0.38	-1.7
866,002	-		PFLU_RS03785	0.38	-0.2
866,002	-		PFLU_RS03785	0.38	+0.4
866,002	-		PFLU_RS03785	0.38	+1.4
866,002	-		PFLU_RS03785	0.38	-1.0
866,136	+		PFLU_RS03785	0.85	-0.2
866,136	+		PFLU_RS03785	0.85	+0.6
866,136	+		PFLU_RS03785	0.85	+0.2
866,137	-		PFLU_RS03785	0.85	-3.3
866,159	+				+0.6
866,160	-				-1.8
866,160	-				-2.7
866,215	+				-2.7
866,215	+				+2.0
866,215	+				-2.3
866,215	+				+0.2
866,215	+				+0.3
866,215	+				+0.1
866,215	+				-1.0
866,215	+				-1.4
866,215	+				-0.8
866,215	+				+0.5
866,215	+				-0.9
866,216	-				-0.3
866,216	-				-1.0
866,216	-				+3.2
866,216	-				-0.5
866,216	-				-0.4
866,216	-				+0.5
866,216	-				+0.2
866,216	-				-1.7
866,217	+				-0.7
866,217	+				-0.4
866,217	+				-1.8
866,217	+				-0.7
866,218	-				-0.4
866,218	-				-0.7
866,218	-				-0.2
866,218	-				+2.4
866,295	+		PFLU_RS03790	0.24	-1.5
866,295	+		PFLU_RS03790	0.24	-0.7
866,295	+		PFLU_RS03790	0.24	+1.3
866,295	+		PFLU_RS03790	0.24	-1.0
866,295	+		PFLU_RS03790	0.24	+2.8
866,295	+		PFLU_RS03790	0.24	-0.8
866,296	-		PFLU_RS03790	0.24	-2.0
866,363	+		PFLU_RS03790	0.38	-1.0
866,363	+		PFLU_RS03790	0.38	-1.7
866,364	-		PFLU_RS03790	0.38	+0.5
866,380	+		PFLU_RS03790	0.41	+0.2
866,380	+		PFLU_RS03790	0.41	+1.0
866,380	+		PFLU_RS03790	0.41	+0.8
866,381	-		PFLU_RS03790	0.42	-1.5
866,389	+		PFLU_RS03790	0.43	+0.5
866,680	+				-0.7
866,680	+				-1.1
866,680	+				-0.6
866,680	+				+0.4
866,680	+				+1.3
866,680	+				-0.5
866,680	+				-1.0
866,680	+				-0.8
866,680	+				+0.5
866,680	+				-0.3
866,680	+				-1.0
866,680	+				+0.5
866,681	-				+0.4
866,681	-				+0.5
866,681	-				-1.3
866,681	-				-1.7
866,681	-				+1.2
866,681	-				+0.6
866,681	-				-1.4
866,681	-				-0.9
866,681	-				+1.1
866,681	-				+0.2
866,685	-				+0.1
866,685	-				-1.1
866,685	-				+0.2
866,685	-				+1.3
866,685	-				+1.3
866,685	-				-0.3
866,857	-				+1.6
866,857	-				-1.2
866,857	-				-0.7
866,857	-				+0.4
866,857	-				+0.3
866,857	-				+1.8
866,857	-				+0.2
866,857	-				-0.1
866,932	-				-0.1
867,020	-				-0.5
867,020	-				+0.8
867,027	-				-1.7
867,027	-				-1.2
867,027	-				-0.8