Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS22185

Experiment: Ferulic Acid 2 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ferulic Acid 2 mM (C)
4,988,824	+				+1.1
4,988,824	+				+0.2
4,988,824	+				+4.1
4,988,824	+				-0.9
4,988,827	+				+0.3
4,988,869	+				+1.5
4,988,870	-				-0.1
4,988,914	+				-0.2
4,988,914	+				-0.9
4,988,915	-				-2.1
4,988,915	-				-0.1
4,988,923	+				-0.2
4,988,923	+				+1.4
4,988,923	+				+1.5
4,988,923	+				-0.2
4,988,924	-				-0.6
4,988,924	-				-1.2
4,988,924	-				-1.1
4,988,924	-				-0.5
4,988,965	+				-2.5
4,988,966	-				-0.5
4,988,966	-				-0.1
4,988,977	-				-1.4
4,988,977	-				+0.9
4,989,018	+		PFLU_RS22180	0.14	-1.5
4,989,019	-		PFLU_RS22180	0.14	-0.9
4,989,019	-		PFLU_RS22180	0.14	-0.6
4,989,019	-		PFLU_RS22180	0.14	-0.9
4,989,109	-		PFLU_RS22180	0.25	-0.9
4,989,109	-		PFLU_RS22180	0.25	-0.1
4,989,188	-		PFLU_RS22180	0.34	-0.5
4,989,188	-		PFLU_RS22180	0.34	-1.5
4,989,188	-		PFLU_RS22180	0.34	-2.7
4,989,188	-		PFLU_RS22180	0.34	+0.8
4,989,327	+		PFLU_RS22180	0.50	+0.5
4,989,327	+		PFLU_RS22180	0.50	-1.2
4,989,328	-		PFLU_RS22180	0.50	+1.8
4,989,328	-		PFLU_RS22180	0.50	+1.8
4,989,328	-		PFLU_RS22180	0.50	-2.4
4,989,380	+		PFLU_RS22180	0.56	-0.8
4,989,380	+		PFLU_RS22180	0.56	+0.8
4,989,380	+		PFLU_RS22180	0.56	+1.8
4,989,381	-		PFLU_RS22180	0.56	+1.2
4,989,381	-		PFLU_RS22180	0.56	+0.5
4,989,381	-		PFLU_RS22180	0.56	-1.4
4,989,446	+		PFLU_RS22180	0.64	-1.8
4,989,446	+		PFLU_RS22180	0.64	-1.3
4,989,446	+		PFLU_RS22180	0.64	-0.5
4,989,446	+		PFLU_RS22180	0.64	+0.9
4,989,446	+		PFLU_RS22180	0.64	-1.8
4,989,447	-		PFLU_RS22180	0.64	-0.2
4,989,447	-		PFLU_RS22180	0.64	-0.7
4,989,447	-		PFLU_RS22180	0.64	+0.0
4,989,447	-		PFLU_RS22180	0.64	-1.2
4,989,509	+		PFLU_RS22180	0.71	-0.8
4,989,510	-		PFLU_RS22180	0.71	+0.9
4,989,600	+		PFLU_RS22180	0.81	+0.7
4,989,601	-		PFLU_RS22180	0.81	+1.4
4,989,612	+		PFLU_RS22180	0.83	-1.5
4,989,713	-				+0.5
4,989,713	-				+1.3
4,989,759	+				+2.1
4,989,759	+				-0.9
4,989,759	+				+1.6
4,989,759	+				-0.7
4,989,760	-				-0.7
4,989,760	-				+0.3
4,989,760	-				+0.9
4,989,760	-				+1.6
4,989,760	-				-0.9
4,989,760	-				+0.9
4,989,760	-				-1.4
4,989,790	+				-0.2
4,989,790	+				+1.4
4,989,790	+				-1.5
4,989,790	+				-1.4
4,989,790	+				-0.2
4,989,790	+				-0.7
4,989,790	+				-2.5
4,989,790	+				+0.4
4,989,790	+				+0.9
4,989,790	+				+1.2
4,989,790	+				-1.1
4,989,790	+				-1.8
4,989,790	+				-0.1
4,989,790	+				-1.2
4,989,790	+				+1.1
4,989,790	+				+0.1
4,989,790	+				-0.1
4,989,790	+				+1.2
4,989,790	+				-0.7
4,989,790	+				-0.1
4,989,790	+				-1.1
4,989,790	+				-1.7
4,989,791	-				-0.9
4,989,791	-				-0.8
4,989,791	-				+0.4
4,989,791	-				-0.2
4,989,791	-				-2.2
4,989,791	-				-0.0
4,989,791	-				+0.5
4,989,791	-				+1.7
4,989,791	-				-0.7
4,989,791	-				-0.3
4,989,791	-				-1.2
4,989,791	-				+1.1
4,989,791	-				-2.1
4,989,791	-				-2.6
4,989,791	-				-0.5
4,989,791	-				-3.0
4,989,791	-				+0.1
4,989,791	-				+1.4
4,989,791	-				+1.5
4,989,791	-				+0.8
4,989,791	-				+1.8
4,990,004	+		PFLU_RS22185	0.50	+0.8
4,990,004	+		PFLU_RS22185	0.50	-2.3
4,990,004	+		PFLU_RS22185	0.50	+0.0
4,990,004	+		PFLU_RS22185	0.50	+1.0
4,990,004	+		PFLU_RS22185	0.50	+0.2
4,990,005	-		PFLU_RS22185	0.50	-1.1
4,990,034	-		PFLU_RS22185	0.57	+0.8
4,990,117	+		PFLU_RS22185	0.79	-1.1
4,990,118	-		PFLU_RS22185	0.79	-1.2
4,990,189	+				+1.2
4,990,189	+				+1.9
4,990,189	+				+0.5
4,990,189	+				-0.5
4,990,189	+				+0.4
4,990,189	+				+1.5
4,990,189	+				+0.9
4,990,189	+				+0.5
4,990,189	+				+1.0
4,990,189	+				+0.1
4,990,190	-				+0.2
4,990,190	-				-2.3
4,990,190	-				-2.0
4,990,190	-				+0.4
4,990,190	-				+0.1
4,990,190	-				-0.2
4,990,190	-				+0.0
4,990,190	-				-0.5
4,990,190	-				-0.0
4,990,190	-				-0.2
4,990,190	-				+0.9
4,990,190	-				-0.7
4,990,190	-				+2.7
4,990,229	+				+0.5
4,990,230	-				-0.5
4,990,332	-				-0.2
4,990,332	-				+0.3
4,990,332	-				+0.5
4,990,563	-		PFLU_RS22190	0.76	+1.7
4,990,563	-		PFLU_RS22190	0.76	+0.6
4,990,635	-				+0.6
4,990,680	+				-2.4
4,990,680	+				-2.3
4,990,680	+				-0.2
4,990,680	+				+1.7
4,990,680	+				-0.1
4,990,681	-				-1.2
4,990,681	-				-2.0
4,990,681	-				+0.1
4,990,681	-				+0.1
4,990,893	+		PFLU_RS22195	0.16	+0.5
4,990,893	+		PFLU_RS22195	0.16	+1.4
4,990,893	+		PFLU_RS22195	0.16	+0.1
4,990,893	+		PFLU_RS22195	0.16	+0.1
4,990,894	-		PFLU_RS22195	0.16	+1.1
4,990,894	-		PFLU_RS22195	0.16	+2.1
4,990,894	-		PFLU_RS22195	0.16	-1.1
4,990,894	-		PFLU_RS22195	0.16	+0.7
4,990,894	-		PFLU_RS22195	0.16	+0.9
4,990,894	-		PFLU_RS22195	0.16	-0.3