Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS18810

Experiment: Ferulic Acid 2 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ferulic Acid 2 mM (C)
4,251,721	+		PFLU_RS18800	0.76	+0.6
4,251,722	-		PFLU_RS18800	0.76	-1.5
4,251,845	+				-0.7
4,251,845	+				+0.9
4,251,845	+				+1.1
4,251,845	+				-0.6
4,251,845	+				-1.6
4,251,845	+				-0.5
4,251,846	-				-0.6
4,251,846	-				+0.0
4,251,846	-				+1.4
4,251,846	-				+1.5
4,251,846	-				+0.6
4,251,846	-				-1.1
4,251,846	-				-1.7
4,251,846	-				-2.2
4,251,878	+				+1.0
4,251,878	+				+0.6
4,251,878	+				+0.6
4,251,878	+				+2.2
4,251,879	-				+0.4
4,251,879	-				+0.8
4,251,879	-				-1.7
4,251,879	-				-1.1
4,251,879	-				+2.3
4,251,936	+				-0.4
4,251,936	+				-1.1
4,251,949	+				-2.6
4,251,949	+				+2.2
4,251,950	-				+0.3
4,251,950	-				-1.3
4,252,104	+		PFLU_RS18805	0.23	-1.9
4,252,104	+		PFLU_RS18805	0.23	-0.1
4,252,105	-		PFLU_RS18805	0.23	-0.1
4,252,105	-		PFLU_RS18805	0.23	+2.3
4,252,105	-		PFLU_RS18805	0.23	+1.9
4,252,537	+		PFLU_RS18805	0.79	-2.1
4,252,571	+		PFLU_RS18805	0.83	+0.9
4,252,751	-				+0.3
4,252,767	+				+0.9
4,252,767	+				+0.5
4,252,767	+				-1.0
4,252,768	-				+0.6
4,253,193	-		PFLU_RS18810	0.55	-0.3
4,253,214	+		PFLU_RS18810	0.57	-1.5
4,253,214	+		PFLU_RS18810	0.57	+0.3
4,253,214	+		PFLU_RS18810	0.57	-1.0
4,253,214	+		PFLU_RS18810	0.57	-0.3
4,253,214	+		PFLU_RS18810	0.57	+1.1
4,253,214	+		PFLU_RS18810	0.57	-1.1
4,253,214	+		PFLU_RS18810	0.57	+0.9
4,253,215	-		PFLU_RS18810	0.57	-0.4
4,253,215	-		PFLU_RS18810	0.57	+0.3
4,253,215	-		PFLU_RS18810	0.57	+3.4
4,253,215	-		PFLU_RS18810	0.57	+0.0
4,253,215	-		PFLU_RS18810	0.57	-0.3
4,253,215	-		PFLU_RS18810	0.57	-1.1
4,253,215	-		PFLU_RS18810	0.57	-1.0
4,253,448	+		PFLU_RS18810	0.83	+1.3
4,253,448	+		PFLU_RS18810	0.83	-0.6
4,253,449	-		PFLU_RS18810	0.83	+2.4
4,253,449	-		PFLU_RS18810	0.83	-1.6
4,253,449	-		PFLU_RS18810	0.83	-0.1
4,253,449	-		PFLU_RS18810	0.83	+1.9
4,253,599	+				-2.2
4,253,599	+				+0.1
4,253,605	+				+0.9
4,253,614	+				+0.9
4,253,653	-				+0.4
4,253,673	-				+0.6
4,253,673	-				+1.7
4,253,673	-				-1.1
4,253,673	-				-0.5
4,253,673	-				+2.2
4,253,769	+				+0.1
4,253,769	+				+1.0
4,253,769	+				-0.5
4,253,769	+				+1.3
4,253,785	-				-1.1
4,253,858	+		PFLU_RS18815	0.10	+1.4
4,253,859	-		PFLU_RS18815	0.10	-1.1
4,253,859	-		PFLU_RS18815	0.10	+1.0
4,253,859	-		PFLU_RS18815	0.10	+1.7
4,253,859	-		PFLU_RS18815	0.10	-0.5
4,253,859	-		PFLU_RS18815	0.10	-0.6
4,253,869	+		PFLU_RS18815	0.11	+0.7
4,253,870	-		PFLU_RS18815	0.11	-0.9
4,253,881	+		PFLU_RS18815	0.12	-1.5
4,253,881	+		PFLU_RS18815	0.12	-1.8
4,253,882	-		PFLU_RS18815	0.12	+1.2
4,253,882	-		PFLU_RS18815	0.12	+0.9
4,253,953	+		PFLU_RS18815	0.17	-1.6
4,253,954	-		PFLU_RS18815	0.17	+1.9
4,254,232	+		PFLU_RS18815	0.36	+2.1
4,254,232	+		PFLU_RS18815	0.36	-0.5
4,254,232	+		PFLU_RS18815	0.36	+1.6
4,254,232	+		PFLU_RS18815	0.36	-1.7
4,254,233	-		PFLU_RS18815	0.36	+1.2
4,254,233	-		PFLU_RS18815	0.36	-0.7
4,254,241	+		PFLU_RS18815	0.37	+0.3
4,254,241	+		PFLU_RS18815	0.37	-2.3
4,254,242	-		PFLU_RS18815	0.37	+0.3
4,254,242	-		PFLU_RS18815	0.37	+0.7
4,254,242	-		PFLU_RS18815	0.37	+0.3
4,254,250	+		PFLU_RS18815	0.38	+0.5
4,254,250	+		PFLU_RS18815	0.38	+0.9
4,254,251	-		PFLU_RS18815	0.38	-1.0
4,254,251	-		PFLU_RS18815	0.38	+0.3
4,254,251	-		PFLU_RS18815	0.38	-0.3
4,254,251	-		PFLU_RS18815	0.38	+0.9
4,254,414	+		PFLU_RS18815	0.49	+1.9
4,254,414	+		PFLU_RS18815	0.49	+0.3
4,254,415	-		PFLU_RS18815	0.49	-0.8
4,254,415	-		PFLU_RS18815	0.49	-0.7
4,254,473	-		PFLU_RS18815	0.53	-1.4
4,254,473	-		PFLU_RS18815	0.53	-0.1
4,254,473	-		PFLU_RS18815	0.53	-0.1