Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS24395

Experiment: propionate 20 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	propionate 20 mM (C)
5,462,394	+		PFLU_RS24390	0.18	-2.6
5,462,394	+		PFLU_RS24390	0.18	+0.0
5,462,394	+		PFLU_RS24390	0.18	+0.0
5,462,395	-		PFLU_RS24390	0.18	-1.3
5,462,395	-		PFLU_RS24390	0.18	+0.2
5,462,402	+		PFLU_RS24390	0.18	+0.8
5,462,402	+		PFLU_RS24390	0.18	-0.4
5,462,402	+		PFLU_RS24390	0.18	+0.6
5,462,402	+		PFLU_RS24390	0.18	-1.1
5,462,402	+		PFLU_RS24390	0.18	-1.7
5,462,402	+		PFLU_RS24390	0.18	+0.9
5,462,402	+		PFLU_RS24390	0.18	-3.5
5,462,403	-		PFLU_RS24390	0.19	+2.5
5,462,403	-		PFLU_RS24390	0.19	+1.3
5,462,406	+		PFLU_RS24390	0.19	-0.8
5,462,406	+		PFLU_RS24390	0.19	-2.0
5,462,407	-		PFLU_RS24390	0.19	+1.1
5,462,605	+		PFLU_RS24390	0.36	+0.2
5,462,605	+		PFLU_RS24390	0.36	+0.6
5,462,605	+		PFLU_RS24390	0.36	+0.3
5,462,605	+		PFLU_RS24390	0.36	-2.0
5,462,605	+		PFLU_RS24390	0.36	-0.4
5,462,605	+		PFLU_RS24390	0.36	+1.7
5,462,605	+		PFLU_RS24390	0.36	-2.5
5,462,606	-		PFLU_RS24390	0.36	+0.6
5,462,606	-		PFLU_RS24390	0.36	-0.1
5,462,682	+		PFLU_RS24390	0.43	+0.4
5,462,682	+		PFLU_RS24390	0.43	+0.8
5,462,682	+		PFLU_RS24390	0.43	-1.7
5,462,682	+		PFLU_RS24390	0.43	-0.9
5,462,683	-		PFLU_RS24390	0.43	-0.8
5,462,683	-		PFLU_RS24390	0.43	+1.4
5,462,683	-		PFLU_RS24390	0.43	-0.3
5,462,683	-		PFLU_RS24390	0.43	+1.3
5,462,788	+		PFLU_RS24390	0.52	+1.3
5,462,788	+		PFLU_RS24390	0.52	-2.5
5,462,788	+		PFLU_RS24390	0.52	-0.6
5,462,788	+		PFLU_RS24390	0.52	+1.2
5,462,789	-		PFLU_RS24390	0.52	-0.1
5,462,789	-		PFLU_RS24390	0.52	+0.3
5,462,789	-		PFLU_RS24390	0.52	+2.2
5,462,789	-		PFLU_RS24390	0.52	+1.9
5,462,789	-		PFLU_RS24390	0.52	-1.1
5,462,789	-		PFLU_RS24390	0.52	+2.2
5,462,936	+		PFLU_RS24390	0.65	-0.6
5,462,936	+		PFLU_RS24390	0.65	-1.6
5,462,936	+		PFLU_RS24390	0.65	-1.5
5,462,936	+		PFLU_RS24390	0.65	+1.2
5,462,937	-		PFLU_RS24390	0.65	-0.1
5,462,937	-		PFLU_RS24390	0.65	+0.2
5,462,937	-		PFLU_RS24390	0.65	+0.6
5,462,937	-		PFLU_RS24390	0.65	+1.5
5,462,937	-		PFLU_RS24390	0.65	+0.9
5,462,937	-		PFLU_RS24390	0.65	+0.9
5,462,937	-		PFLU_RS24390	0.65	+0.0
5,462,937	-		PFLU_RS24390	0.65	-1.7
5,462,937	-		PFLU_RS24390	0.65	-2.1
5,463,076	+		PFLU_RS24390	0.77	-0.4
5,463,076	+		PFLU_RS24390	0.77	-1.5
5,463,076	+		PFLU_RS24390	0.77	+0.2
5,463,076	+		PFLU_RS24390	0.77	-0.5
5,463,076	+		PFLU_RS24390	0.77	-0.9
5,463,076	+		PFLU_RS24390	0.77	+0.4
5,463,077	-		PFLU_RS24390	0.77	-1.3
5,463,077	-		PFLU_RS24390	0.77	+1.0
5,463,077	-		PFLU_RS24390	0.77	-0.5
5,463,077	-		PFLU_RS24390	0.77	-0.4
5,463,077	-		PFLU_RS24390	0.77	-1.1
5,463,077	-		PFLU_RS24390	0.77	-2.3
5,463,077	-		PFLU_RS24390	0.77	+0.9
5,463,077	-		PFLU_RS24390	0.77	+0.2
5,463,077	-		PFLU_RS24390	0.77	-1.3
5,463,082	+		PFLU_RS24390	0.77	+3.0
5,463,082	+		PFLU_RS24390	0.77	-0.3
5,463,082	+		PFLU_RS24390	0.77	+0.5
5,463,082	+		PFLU_RS24390	0.77	+0.2
5,463,082	+		PFLU_RS24390	0.77	+0.9
5,463,083	-		PFLU_RS24390	0.77	-1.6
5,463,083	-		PFLU_RS24390	0.77	+0.5
5,463,083	-		PFLU_RS24390	0.77	+0.2
5,463,083	-		PFLU_RS24390	0.77	+2.0
5,463,083	-		PFLU_RS24390	0.77	-0.6
5,463,083	-		PFLU_RS24390	0.77	+1.3
5,463,083	-		PFLU_RS24390	0.77	+1.2
5,463,083	-		PFLU_RS24390	0.77	-1.6
5,463,083	-		PFLU_RS24390	0.77	-1.3
5,463,083	-		PFLU_RS24390	0.77	-1.6
5,463,279	+				-0.6
5,463,279	+				+0.5
5,463,279	+				-0.9
5,463,280	-				+0.5
5,463,280	-				+1.9
5,463,325	+				-1.0
5,463,326	-				+0.3
5,463,376	+				-1.1
5,463,376	+				+0.6
5,463,377	-				+0.0
5,463,377	-				+0.6
5,463,377	-				-0.1
5,463,400	+				-2.8
5,463,400	+				-0.1
5,463,400	+				+0.6
5,463,400	+				-0.8
5,463,400	+				-1.1
5,463,400	+				+0.6
5,463,400	+				+0.4
5,463,400	+				+0.6
5,463,401	-				+0.1
5,463,401	-				+0.8
5,463,401	-				-1.8
5,463,401	-				-0.5
5,463,525	+				-0.1
5,463,525	+				+0.4
5,463,525	+				+2.3
5,463,525	+				+0.7
5,463,525	+				+0.6
5,463,525	+				+3.8
5,463,525	+				+0.6
5,463,526	-				-0.8
5,463,526	-				-0.6
5,463,526	-				-2.4
5,463,526	-				+1.2
5,463,526	-				-1.0
5,463,526	-				+1.4
5,463,526	-				+0.2
5,463,576	+				+2.0
5,463,576	+				+0.2
5,463,576	+				-1.8
5,463,576	+				+0.6
5,463,576	+				+3.7
5,463,576	+				-1.5
5,463,576	+				-0.1
5,463,576	+				+0.8
5,463,576	+				-0.0
5,463,576	+				+0.3
5,463,576	+				-1.3
5,463,576	+				+1.4
5,463,577	-				+0.4
5,463,577	-				-1.0
5,463,577	-				-1.8
5,463,577	-				-0.7
5,463,577	-				+0.4
5,463,577	-				-2.1
5,463,577	-				-1.1
5,463,577	-				+1.0
5,463,577	-				+1.0
5,463,577	-				+1.9
5,463,622	-				+0.6
5,463,664	+		PFLU_RS24395	0.11	+1.1
5,463,664	+		PFLU_RS24395	0.11	-0.7
5,463,665	-		PFLU_RS24395	0.11	-1.8
5,463,759	+		PFLU_RS24395	0.14	-0.6
5,463,759	+		PFLU_RS24395	0.14	-0.1
5,463,759	+		PFLU_RS24395	0.14	-2.3
5,463,759	+		PFLU_RS24395	0.14	+0.9
5,463,760	-		PFLU_RS24395	0.14	-0.4
5,463,760	-		PFLU_RS24395	0.14	+2.2
5,463,760	-		PFLU_RS24395	0.14	+2.2
5,463,760	-		PFLU_RS24395	0.14	+4.2
5,463,760	-		PFLU_RS24395	0.14	+0.9
5,463,760	-		PFLU_RS24395	0.14	+0.2
5,463,807	+		PFLU_RS24395	0.15	+0.8
5,463,808	-		PFLU_RS24395	0.15	-0.4
5,463,911	+		PFLU_RS24395	0.19	-0.1
5,463,913	+		PFLU_RS24395	0.19	-1.0
5,463,913	+		PFLU_RS24395	0.19	+0.4
5,463,913	+		PFLU_RS24395	0.19	-0.6
5,463,914	-		PFLU_RS24395	0.19	+0.3
5,463,969	+		PFLU_RS24395	0.20	-0.4
5,463,969	+		PFLU_RS24395	0.20	+1.4
5,463,969	+		PFLU_RS24395	0.20	-0.5
5,463,970	-		PFLU_RS24395	0.21	-0.4
5,463,970	-		PFLU_RS24395	0.21	-1.4
5,464,008	+		PFLU_RS24395	0.22	-2.4
5,464,008	+		PFLU_RS24395	0.22	-0.4
5,464,008	+		PFLU_RS24395	0.22	+0.1
5,464,008	+		PFLU_RS24395	0.22	-0.6
5,464,008	+		PFLU_RS24395	0.22	-0.8
5,464,008	+		PFLU_RS24395	0.22	-0.4
5,464,008	+		PFLU_RS24395	0.22	+0.4
5,464,008	+		PFLU_RS24395	0.22	-1.0
5,464,008	+		PFLU_RS24395	0.22	+0.5
5,464,008	+		PFLU_RS24395	0.22	+2.0
5,464,008	+		PFLU_RS24395	0.22	+1.5
5,464,008	+		PFLU_RS24395	0.22	+2.2
5,464,008	+		PFLU_RS24395	0.22	-1.5
5,464,008	+		PFLU_RS24395	0.22	+1.7
5,464,008	+		PFLU_RS24395	0.22	-2.4
5,464,008	+		PFLU_RS24395	0.22	+0.5
5,464,008	+		PFLU_RS24395	0.22	+1.2
5,464,008	+		PFLU_RS24395	0.22	-1.1
5,464,008	+		PFLU_RS24395	0.22	+0.9
5,464,008	+		PFLU_RS24395	0.22	+0.2
5,464,008	+		PFLU_RS24395	0.22	-0.6
5,464,009	-		PFLU_RS24395	0.22	+1.2
5,464,009	-		PFLU_RS24395	0.22	-0.7
5,464,009	-		PFLU_RS24395	0.22	+0.8
5,464,009	-		PFLU_RS24395	0.22	-1.2
5,464,009	-		PFLU_RS24395	0.22	-1.7
5,464,009	-		PFLU_RS24395	0.22	-0.8
5,464,009	-		PFLU_RS24395	0.22	+1.7
5,464,009	-		PFLU_RS24395	0.22	-0.6
5,464,009	-		PFLU_RS24395	0.22	-0.7
5,464,009	-		PFLU_RS24395	0.22	-2.5
5,464,009	-		PFLU_RS24395	0.22	-2.0
5,464,009	-		PFLU_RS24395	0.22	-1.7
5,464,009	-		PFLU_RS24395	0.22	+0.6
5,464,009	-		PFLU_RS24395	0.22	-0.7
5,464,009	-		PFLU_RS24395	0.22	+0.1
5,464,009	-		PFLU_RS24395	0.22	+1.0
5,464,009	-		PFLU_RS24395	0.22	-1.9
5,464,009	-		PFLU_RS24395	0.22	+1.1
5,464,051	+		PFLU_RS24395	0.23	+0.8
5,464,061	+		PFLU_RS24395	0.23	-2.4
5,464,061	+		PFLU_RS24395	0.23	+0.6
5,464,061	+		PFLU_RS24395	0.23	-0.7
5,464,061	+		PFLU_RS24395	0.23	+3.2
5,464,062	-		PFLU_RS24395	0.24	+0.2
5,464,062	-		PFLU_RS24395	0.24	+1.2
5,464,143	+		PFLU_RS24395	0.26	+1.0
5,464,143	+		PFLU_RS24395	0.26	+0.4
5,464,143	+		PFLU_RS24395	0.26	+0.4
5,464,144	-		PFLU_RS24395	0.26	-0.8
5,464,158	-		PFLU_RS24395	0.27	-1.7
5,464,158	-		PFLU_RS24395	0.27	-0.8
5,464,182	+		PFLU_RS24395	0.27	+0.5
5,464,182	+		PFLU_RS24395	0.27	+2.3
5,464,182	+		PFLU_RS24395	0.27	-0.4
5,464,182	+		PFLU_RS24395	0.27	+1.4
5,464,182	+		PFLU_RS24395	0.27	+1.9
5,464,182	+		PFLU_RS24395	0.27	-1.7
5,464,182	+		PFLU_RS24395	0.27	+0.5
5,464,182	+		PFLU_RS24395	0.27	+0.4
5,464,182	+		PFLU_RS24395	0.27	+0.9
5,464,182	+		PFLU_RS24395	0.27	-0.9
5,464,182	+		PFLU_RS24395	0.27	-1.7
5,464,182	+		PFLU_RS24395	0.27	-1.4
5,464,183	-		PFLU_RS24395	0.27	+0.6
5,464,183	-		PFLU_RS24395	0.27	-0.7
5,464,183	-		PFLU_RS24395	0.27	+1.8
5,464,183	-		PFLU_RS24395	0.27	-2.1
5,464,183	-		PFLU_RS24395	0.27	+2.1
5,464,183	-		PFLU_RS24395	0.27	+2.1
5,464,183	-		PFLU_RS24395	0.27	+2.1
5,464,183	-		PFLU_RS24395	0.27	-2.4
5,464,183	-		PFLU_RS24395	0.27	-1.5
5,464,183	-		PFLU_RS24395	0.27	+2.1
5,464,183	-		PFLU_RS24395	0.27	+0.6
5,464,300	-		PFLU_RS24395	0.31	-2.7
5,464,300	-		PFLU_RS24395	0.31	-1.3
5,464,314	+		PFLU_RS24395	0.32	-0.9
5,464,314	+		PFLU_RS24395	0.32	-0.9
5,464,314	+		PFLU_RS24395	0.32	+0.9
5,464,314	+		PFLU_RS24395	0.32	-1.0
5,464,314	+		PFLU_RS24395	0.32	-0.4
5,464,314	+		PFLU_RS24395	0.32	+2.4
5,464,315	-		PFLU_RS24395	0.32	+1.2
5,464,315	-		PFLU_RS24395	0.32	+0.5
5,464,315	-		PFLU_RS24395	0.32	-0.5
5,464,315	-		PFLU_RS24395	0.32	+0.5
5,464,315	-		PFLU_RS24395	0.32	-1.4
5,464,315	-		PFLU_RS24395	0.32	-0.3
5,464,328	+		PFLU_RS24395	0.32	-1.0
5,464,418	-		PFLU_RS24395	0.35	+1.2
5,464,434	-		PFLU_RS24395	0.36	+1.6
5,464,482	+		PFLU_RS24395	0.37	+1.1
5,464,483	-		PFLU_RS24395	0.37	-0.2
5,464,589	+		PFLU_RS24395	0.41	+1.2
5,464,589	+		PFLU_RS24395	0.41	-1.7
5,464,630	+		PFLU_RS24395	0.42	-1.6
5,464,630	+		PFLU_RS24395	0.42	-0.6
5,464,630	+		PFLU_RS24395	0.42	-1.0
5,464,630	+		PFLU_RS24395	0.42	-1.4
5,464,630	+		PFLU_RS24395	0.42	-1.1
5,464,630	+		PFLU_RS24395	0.42	+0.9
5,464,630	+		PFLU_RS24395	0.42	+1.2
5,464,630	+		PFLU_RS24395	0.42	-1.8
5,464,630	+		PFLU_RS24395	0.42	+1.0
5,464,630	+		PFLU_RS24395	0.42	+1.9
5,464,630	+		PFLU_RS24395	0.42	+0.2
5,464,630	+		PFLU_RS24395	0.42	-1.8
5,464,630	+		PFLU_RS24395	0.42	+1.5
5,464,630	+		PFLU_RS24395	0.42	+1.2
5,464,630	+		PFLU_RS24395	0.42	-1.6
5,464,630	+		PFLU_RS24395	0.42	+1.6
5,464,630	+		PFLU_RS24395	0.42	-1.8
5,464,630	+		PFLU_RS24395	0.42	+3.1
5,464,630	+		PFLU_RS24395	0.42	-0.3
5,464,630	+		PFLU_RS24395	0.42	-1.0
5,464,630	+		PFLU_RS24395	0.42	+0.0
5,464,630	+		PFLU_RS24395	0.42	-0.7
5,464,630	+		PFLU_RS24395	0.42	+1.2
5,464,630	+		PFLU_RS24395	0.42	-0.4
5,464,630	+		PFLU_RS24395	0.42	+2.6
5,464,630	+		PFLU_RS24395	0.42	+0.2
5,464,630	+		PFLU_RS24395	0.42	+1.7
5,464,630	+		PFLU_RS24395	0.42	-1.0
5,464,630	+		PFLU_RS24395	0.42	-1.4
5,464,631	-		PFLU_RS24395	0.42	-0.7
5,464,631	-		PFLU_RS24395	0.42	-0.6
5,464,631	-		PFLU_RS24395	0.42	+1.0
5,464,631	-		PFLU_RS24395	0.42	+0.4
5,464,631	-		PFLU_RS24395	0.42	+0.2
5,464,631	-		PFLU_RS24395	0.42	+1.2
5,464,631	-		PFLU_RS24395	0.42	+1.4
5,464,631	-		PFLU_RS24395	0.42	+1.8
5,464,631	-		PFLU_RS24395	0.42	-0.4
5,464,631	-		PFLU_RS24395	0.42	-3.2
5,464,631	-		PFLU_RS24395	0.42	-2.5
5,464,631	-		PFLU_RS24395	0.42	+0.3
5,464,631	-		PFLU_RS24395	0.42	-0.9
5,464,631	-		PFLU_RS24395	0.42	-0.6
5,464,631	-		PFLU_RS24395	0.42	+0.4
5,464,631	-		PFLU_RS24395	0.42	+0.2
5,464,631	-		PFLU_RS24395	0.42	+0.6
5,464,631	-		PFLU_RS24395	0.42	-1.3
5,464,631	-		PFLU_RS24395	0.42	+0.6
5,464,631	-		PFLU_RS24395	0.42	-0.1
5,464,631	-		PFLU_RS24395	0.42	-0.1
5,464,631	-		PFLU_RS24395	0.42	-2.5
5,464,631	-		PFLU_RS24395	0.42	-1.9
5,464,631	-		PFLU_RS24395	0.42	-0.4
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5,464,674	+		PFLU_RS24395	0.44	-2.1
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5,465,014	+		PFLU_RS24395	0.55	+2.3
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5,465,063	+		PFLU_RS24395	0.56	+2.9
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5,465,064	-		PFLU_RS24395	0.56	+2.2
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5,465,067	+		PFLU_RS24395	0.56	+3.8
5,465,067	+		PFLU_RS24395	0.56	-2.0
5,465,067	+		PFLU_RS24395	0.56	+1.3
5,465,067	+		PFLU_RS24395	0.56	-0.4
5,465,067	+		PFLU_RS24395	0.56	-2.1
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5,465,067	+		PFLU_RS24395	0.56	+2.2
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5,465,212	+		PFLU_RS24395	0.61	+2.9
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5,466,516	-				+3.0
5,466,516	-				+1.2
5,466,516	-				-1.3
5,466,516	-				-1.7
5,466,516	-				-1.3
5,466,516	-				+0.6
5,466,516	-				-1.0
5,466,569	+				-0.1
5,466,569	+				-0.3
5,466,569	+				-1.3
5,466,569	+				-1.8
5,466,570	-				+2.2
5,466,570	-				-0.3
5,466,570	-				+1.4
5,466,570	-				+1.4
5,466,570	-				-1.1
5,466,570	-				-1.0
5,466,613	+				-1.0
5,466,613	+				+0.3
5,466,613	+				-1.7
5,466,613	+				-0.1
5,466,614	-				+0.5
5,466,614	-				-2.1
5,466,614	-				+2.1
5,466,636	+				-0.6
5,466,636	+				+2.5
5,466,636	+				+1.3
5,466,637	-				-1.4
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5,466,638	+				-1.3
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5,466,639	-				+0.9
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5,466,736	+		PFLU_RS24400	0.15	-2.3
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5,466,737	-		PFLU_RS24400	0.15	-0.7
5,466,737	-		PFLU_RS24400	0.15	-0.4
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5,467,111	+		PFLU_RS24400	0.48	+1.8
5,467,111	+		PFLU_RS24400	0.48	+0.4
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5,467,119	+		PFLU_RS24400	0.49	+0.1
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5,467,120	-		PFLU_RS24400	0.49	-0.1
5,467,120	-		PFLU_RS24400	0.49	-1.0
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5,467,170	+		PFLU_RS24400	0.53	-1.0
5,467,170	+		PFLU_RS24400	0.53	-0.1
5,467,170	+		PFLU_RS24400	0.53	-0.4
5,467,170	+		PFLU_RS24400	0.53	-2.5
5,467,170	+		PFLU_RS24400	0.53	-0.6
5,467,170	+		PFLU_RS24400	0.53	+0.6
5,467,171	-		PFLU_RS24400	0.53	+1.1
5,467,171	-		PFLU_RS24400	0.53	+2.3
5,467,182	+		PFLU_RS24400	0.54	+0.7
5,467,182	+		PFLU_RS24400	0.54	-2.1
5,467,182	+		PFLU_RS24400	0.54	-0.2
5,467,182	+		PFLU_RS24400	0.54	-1.7
5,467,182	+		PFLU_RS24400	0.54	-1.5
5,467,182	+		PFLU_RS24400	0.54	-1.3
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5,467,182	+		PFLU_RS24400	0.54	-0.8
5,467,182	+		PFLU_RS24400	0.54	-0.1
5,467,182	+		PFLU_RS24400	0.54	-0.5
5,467,182	+		PFLU_RS24400	0.54	-1.8
5,467,182	+		PFLU_RS24400	0.54	-0.1
5,467,182	+		PFLU_RS24400	0.54	-2.1
5,467,182	+		PFLU_RS24400	0.54	+0.2
5,467,182	+		PFLU_RS24400	0.54	+0.2
5,467,182	+		PFLU_RS24400	0.54	+2.4
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5,467,183	-		PFLU_RS24400	0.54	+1.3
5,467,183	-		PFLU_RS24400	0.54	+1.7
5,467,183	-		PFLU_RS24400	0.54	-0.9
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5,467,183	-		PFLU_RS24400	0.54	+1.6
5,467,183	-		PFLU_RS24400	0.54	-2.3
5,467,183	-		PFLU_RS24400	0.54	+0.6
5,467,183	-		PFLU_RS24400	0.54	-1.3
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5,467,183	-		PFLU_RS24400	0.54	+0.9
5,467,183	-		PFLU_RS24400	0.54	+1.2
5,467,183	-		PFLU_RS24400	0.54	+0.3
5,467,183	-		PFLU_RS24400	0.54	-1.0
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5,467,183	-		PFLU_RS24400	0.54	+2.2
5,467,183	-		PFLU_RS24400	0.54	+2.2
5,467,183	-		PFLU_RS24400	0.54	-0.6
5,467,183	-		PFLU_RS24400	0.54	+0.6
5,467,183	-		PFLU_RS24400	0.54	-1.4
5,467,183	-		PFLU_RS24400	0.54	-0.1
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5,467,183	-		PFLU_RS24400	0.54	-0.4
5,467,183	-		PFLU_RS24400	0.54	-0.8
5,467,184	+		PFLU_RS24400	0.54	+2.9
5,467,185	-		PFLU_RS24400	0.54	-0.4