Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS23900

Experiment: propionate 20 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	propionate 20 mM (C)
5,355,502	-				+1.1
5,355,502	-				+0.4
5,355,502	-				+2.5
5,355,502	-				+1.3
5,355,502	-				+3.1
5,355,502	-				+0.8
5,355,502	-				+2.5
5,355,502	-				+2.6
5,355,502	-				+2.1
5,355,502	-				+0.2
5,355,502	-				+0.6
5,355,502	-				+0.6
5,355,568	+				+3.5
5,355,568	+				+1.2
5,355,569	-				+1.0
5,355,569	-				+0.6
5,355,569	-				+1.3
5,355,569	-				-2.3
5,355,569	-				+1.4
5,355,569	-				-1.2
5,355,569	-				-2.1
5,355,569	-				-1.4
5,355,594	-				+2.1
5,355,594	-				-0.2
5,355,625	+				+1.1
5,355,625	+				-1.7
5,355,625	+				+0.6
5,355,625	+				+1.8
5,355,625	+				-1.0
5,355,626	-				-2.2
5,355,626	-				+4.1
5,355,626	-				+2.5
5,355,626	-				-2.4
5,355,711	+		PFLU_RS23895	0.35	-0.4
5,355,711	+		PFLU_RS23895	0.35	+0.4
5,355,711	+		PFLU_RS23895	0.35	-1.8
5,355,712	-		PFLU_RS23895	0.36	+1.5
5,355,999	-				-0.2
5,356,002	+				-0.7
5,356,002	+				-1.2
5,356,003	-				-1.7
5,356,003	-				+0.6
5,356,152	-		PFLU_RS23900	0.15	-1.7
5,356,438	-		PFLU_RS23900	0.46	+0.1
5,356,568	+		PFLU_RS23900	0.60	-2.4
5,356,630	+		PFLU_RS23900	0.66	-1.3
5,356,630	+		PFLU_RS23900	0.66	+1.7
5,356,631	-		PFLU_RS23900	0.66	+0.6
5,356,669	+		PFLU_RS23900	0.71	-1.6
5,356,669	+		PFLU_RS23900	0.71	+1.6
5,356,670	-		PFLU_RS23900	0.71	+0.6
5,356,670	-		PFLU_RS23900	0.71	-0.9
5,356,670	-		PFLU_RS23900	0.71	+0.1
5,356,725	+		PFLU_RS23900	0.77	-1.7
5,356,725	+		PFLU_RS23900	0.77	-0.7
5,356,725	+		PFLU_RS23900	0.77	+0.4
5,356,725	+		PFLU_RS23900	0.77	+2.1
5,356,725	+		PFLU_RS23900	0.77	-0.0
5,356,725	+		PFLU_RS23900	0.77	-1.4
5,356,726	-		PFLU_RS23900	0.77	+1.4
5,356,726	-		PFLU_RS23900	0.77	-0.8
5,356,726	-		PFLU_RS23900	0.77	-0.7
5,356,726	-		PFLU_RS23900	0.77	-2.2
5,356,726	-		PFLU_RS23900	0.77	-1.9
5,356,726	-		PFLU_RS23900	0.77	+3.5
5,356,726	-		PFLU_RS23900	0.77	-0.3
5,356,726	-		PFLU_RS23900	0.77	-1.9
5,356,726	-		PFLU_RS23900	0.77	-1.8
5,356,958	-				-1.4
5,356,958	-				+0.1
5,357,049	-		PFLU_RS23905	0.11	-1.3
5,357,147	+		PFLU_RS23905	0.23	+1.1
5,357,147	+		PFLU_RS23905	0.23	-1.9
5,357,147	+		PFLU_RS23905	0.23	+2.8
5,357,147	+		PFLU_RS23905	0.23	-3.0
5,357,148	-		PFLU_RS23905	0.23	+1.3
5,357,148	-		PFLU_RS23905	0.23	-1.0
5,357,148	-		PFLU_RS23905	0.23	-0.7
5,357,339	+		PFLU_RS23905	0.47	+0.6
5,357,339	+		PFLU_RS23905	0.47	-0.2
5,357,368	+		PFLU_RS23905	0.50	-1.2
5,357,368	+		PFLU_RS23905	0.50	+3.3
5,357,368	+		PFLU_RS23905	0.50	+2.1
5,357,368	+		PFLU_RS23905	0.50	-0.4
5,357,368	+		PFLU_RS23905	0.50	+0.8
5,357,369	-		PFLU_RS23905	0.50	+2.1
5,357,369	-		PFLU_RS23905	0.50	-2.2
5,357,369	-		PFLU_RS23905	0.50	-1.6
5,357,488	+		PFLU_RS23905	0.65	-1.0
5,357,488	+		PFLU_RS23905	0.65	+0.6
5,357,489	-		PFLU_RS23905	0.65	-0.3
5,357,489	-		PFLU_RS23905	0.65	+0.1
5,357,533	+		PFLU_RS23905	0.70	+0.1
5,357,533	+		PFLU_RS23905	0.70	+1.1
5,357,533	+		PFLU_RS23905	0.70	-1.2
5,357,533	+		PFLU_RS23905	0.70	-2.0
5,357,533	+		PFLU_RS23905	0.70	-0.7
5,357,533	+		PFLU_RS23905	0.70	+2.1
5,357,533	+		PFLU_RS23905	0.70	+0.4
5,357,533	+		PFLU_RS23905	0.70	-1.0
5,357,533	+		PFLU_RS23905	0.70	-0.4
5,357,533	+		PFLU_RS23905	0.70	+0.6
5,357,533	+		PFLU_RS23905	0.70	+2.4
5,357,533	+		PFLU_RS23905	0.70	-2.6
5,357,533	+		PFLU_RS23905	0.70	-1.9
5,357,534	-		PFLU_RS23905	0.71	+0.6
5,357,534	-		PFLU_RS23905	0.71	-0.9
5,357,534	-		PFLU_RS23905	0.71	+1.1
5,357,534	-		PFLU_RS23905	0.71	-1.0
5,357,534	-		PFLU_RS23905	0.71	+2.1
5,357,534	-		PFLU_RS23905	0.71	-0.9
5,357,534	-		PFLU_RS23905	0.71	+3.1
5,357,534	-		PFLU_RS23905	0.71	-1.0
5,357,534	-		PFLU_RS23905	0.71	-2.4
5,357,534	-		PFLU_RS23905	0.71	-0.2
5,357,534	-		PFLU_RS23905	0.71	-1.3
5,357,542	+		PFLU_RS23905	0.72	-0.9
5,357,542	+		PFLU_RS23905	0.72	+0.3
5,357,542	+		PFLU_RS23905	0.72	-0.9
5,357,542	+		PFLU_RS23905	0.72	-1.7
5,357,542	+		PFLU_RS23905	0.72	+0.9
5,357,543	-		PFLU_RS23905	0.72	+0.6
5,357,543	-		PFLU_RS23905	0.72	-0.7
5,357,543	-		PFLU_RS23905	0.72	-1.3
5,357,543	-		PFLU_RS23905	0.72	+0.6
5,357,543	-		PFLU_RS23905	0.72	-0.9
5,357,543	-		PFLU_RS23905	0.72	-0.4
5,357,543	-		PFLU_RS23905	0.72	-0.1
5,357,543	-		PFLU_RS23905	0.72	-2.5
5,357,543	-		PFLU_RS23905	0.72	+1.1
5,357,579	+		PFLU_RS23905	0.76	-1.3
5,357,579	+		PFLU_RS23905	0.76	-1.9
5,357,605	+		PFLU_RS23905	0.79	+0.7
5,357,606	-		PFLU_RS23905	0.79	-0.6
5,357,606	-		PFLU_RS23905	0.79	+1.1
5,357,671	+		PFLU_RS23905	0.87	+0.4
5,357,671	+		PFLU_RS23905	0.87	+0.3
5,357,671	+		PFLU_RS23905	0.87	-0.4
5,357,671	+		PFLU_RS23905	0.87	-3.1
5,357,671	+		PFLU_RS23905	0.87	+0.1
5,357,671	+		PFLU_RS23905	0.87	+1.9
5,357,671	+		PFLU_RS23905	0.87	-1.6
5,357,672	-		PFLU_RS23905	0.87	+0.1
5,357,672	-		PFLU_RS23905	0.87	+1.1
5,357,672	-		PFLU_RS23905	0.87	-0.9
5,357,672	-		PFLU_RS23905	0.87	-1.7
5,357,672	-		PFLU_RS23905	0.87	+1.1
5,357,707	+				-1.9
5,357,707	+				-0.4
5,357,707	+				+1.5
5,357,707	+				-0.2
5,357,707	+				+1.7
5,357,707	+				-1.9
5,357,707	+				-0.2
5,357,707	+				+1.1
5,357,707	+				-0.2
5,357,707	+				-1.0
5,357,707	+				-0.4
5,357,707	+				+1.5
5,357,707	+				-0.0
5,357,708	-				-1.0
5,357,708	-				-2.2
5,357,708	-				-0.7
5,357,708	-				-1.4
5,357,708	-				+0.1
5,357,708	-				+0.1
5,357,708	-				+0.3
5,357,708	-				+0.4
5,357,708	-				+0.1
5,357,708	-				+2.8
5,357,708	-				-1.3
5,357,789	+				-0.5
5,357,789	+				-1.0
5,357,789	+				-0.5
5,357,790	-				+0.1