Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS22305

Experiment: propionate 20 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	propionate 20 mM (C)
5,016,688	+				-0.1
5,016,689	-				+0.1
5,016,723	+				+1.3
5,016,723	+				+0.4
5,016,723	+				-1.7
5,016,723	+				+2.4
5,016,723	+				-0.7
5,016,723	+				+0.6
5,016,723	+				+1.9
5,016,723	+				-1.3
5,016,723	+				+0.9
5,016,723	+				-0.4
5,016,724	-				+1.8
5,016,724	-				+0.3
5,016,724	-				-0.9
5,016,724	-				-1.9
5,016,724	-				-2.2
5,016,724	-				+0.1
5,016,724	-				-0.9
5,016,724	-				+0.5
5,016,724	-				+1.1
5,016,724	-				-1.8
5,016,724	-				-0.6
5,016,724	-				+1.2
5,016,724	-				-2.1
5,016,724	-				+1.0
5,016,724	-				-1.9
5,016,945	+		PFLU_RS22300	0.27	+0.2
5,016,945	+		PFLU_RS22300	0.27	-0.6
5,016,945	+		PFLU_RS22300	0.27	+0.5
5,016,945	+		PFLU_RS22300	0.27	-1.8
5,016,945	+		PFLU_RS22300	0.27	-1.4
5,016,945	+		PFLU_RS22300	0.27	-1.6
5,016,945	+		PFLU_RS22300	0.27	+2.0
5,016,945	+		PFLU_RS22300	0.27	+1.0
5,016,945	+		PFLU_RS22300	0.27	+2.4
5,016,946	-		PFLU_RS22300	0.27	+0.9
5,016,946	-		PFLU_RS22300	0.27	+0.1
5,016,946	-		PFLU_RS22300	0.27	-1.6
5,016,946	-		PFLU_RS22300	0.27	-2.1
5,016,946	-		PFLU_RS22300	0.27	+0.8
5,016,946	-		PFLU_RS22300	0.27	+1.5
5,016,946	-		PFLU_RS22300	0.27	+2.5
5,016,946	-		PFLU_RS22300	0.27	+0.2
5,016,978	+		PFLU_RS22300	0.31	-1.0
5,017,018	+		PFLU_RS22300	0.35	-2.8
5,017,018	+		PFLU_RS22300	0.35	-0.8
5,017,018	+		PFLU_RS22300	0.35	-0.8
5,017,019	-		PFLU_RS22300	0.35	+1.7
5,017,019	-		PFLU_RS22300	0.35	-1.7
5,017,019	-		PFLU_RS22300	0.35	+0.6
5,017,019	-		PFLU_RS22300	0.35	-0.2
5,017,183	-		PFLU_RS22300	0.53	-1.3
5,017,183	-		PFLU_RS22300	0.53	-0.2
5,017,303	-		PFLU_RS22300	0.67	-1.0
5,017,395	+		PFLU_RS22300	0.77	-1.0
5,017,395	+		PFLU_RS22300	0.77	+0.9
5,017,395	+		PFLU_RS22300	0.77	+0.6
5,017,395	+		PFLU_RS22300	0.77	+2.1
5,017,395	+		PFLU_RS22300	0.77	+1.3
5,017,395	+		PFLU_RS22300	0.77	+2.6
5,017,395	+		PFLU_RS22300	0.77	+2.6
5,017,395	+		PFLU_RS22300	0.77	-2.0
5,017,395	+		PFLU_RS22300	0.77	+0.2
5,017,396	-		PFLU_RS22300	0.77	-0.9
5,017,396	-		PFLU_RS22300	0.77	-1.5
5,017,396	-		PFLU_RS22300	0.77	+1.1
5,017,396	-		PFLU_RS22300	0.77	-1.8
5,017,396	-		PFLU_RS22300	0.77	+0.2
5,017,404	+		PFLU_RS22300	0.78	+1.0
5,017,527	+				+2.1
5,017,527	+				+4.1
5,017,527	+				+0.7
5,017,527	+				-2.2
5,017,528	-				-2.0
5,017,537	+				-2.3
5,017,567	+				+1.2
5,017,567	+				-0.2
5,017,567	+				-0.4
5,017,567	+				+0.2
5,017,567	+				-0.4
5,017,567	+				-0.7
5,017,567	+				+1.8
5,017,567	+				-1.6
5,017,568	-				-0.1
5,017,568	-				-1.2
5,017,568	-				-1.3
5,017,568	-				+1.3
5,017,568	-				+2.5
5,017,568	-				+1.4
5,017,568	-				+2.0
5,017,646	+				-1.0
5,017,646	+				-1.4
5,017,647	-				+1.2
5,017,647	-				+0.9
5,017,647	-				-0.9
5,017,647	-				+0.3
5,017,647	-				-0.9
5,017,647	-				-1.2
5,017,648	+				+2.1
5,017,648	+				-2.4
5,017,649	-				+2.3
5,017,649	-				+2.1
5,017,649	-				-1.0
5,017,649	-				-0.9
5,017,649	-				+0.7
5,017,649	-				-2.4
5,017,649	-				+1.2
5,017,649	-				+0.3
5,017,649	-				+0.8
5,017,701	+				+0.7
5,017,701	+				-1.7
5,017,701	+				-0.6
5,017,702	-				-2.4
5,017,702	-				-2.2
5,017,726	-				-0.7
5,017,743	+				-0.2
5,017,743	+				+1.5
5,017,744	-				+1.6
5,017,820	+		PFLU_RS22305	0.18	-0.2
5,017,820	+		PFLU_RS22305	0.18	-0.9
5,017,820	+		PFLU_RS22305	0.18	-2.2
5,017,820	+		PFLU_RS22305	0.18	-0.6
5,017,820	+		PFLU_RS22305	0.18	+2.0
5,017,820	+		PFLU_RS22305	0.18	-0.5
5,017,820	+		PFLU_RS22305	0.18	+0.3
5,017,820	+		PFLU_RS22305	0.18	-0.1
5,017,821	-		PFLU_RS22305	0.18	+0.6
5,017,821	-		PFLU_RS22305	0.18	-2.3
5,017,821	-		PFLU_RS22305	0.18	+0.4
5,017,821	-		PFLU_RS22305	0.18	-1.9
5,017,821	-		PFLU_RS22305	0.18	+1.4
5,017,856	+		PFLU_RS22305	0.22	-0.2
5,017,857	-		PFLU_RS22305	0.22	-1.0
5,017,861	+		PFLU_RS22305	0.23	+2.4
5,017,862	-		PFLU_RS22305	0.23	+1.1
5,017,902	+		PFLU_RS22305	0.28	-1.6
5,017,902	+		PFLU_RS22305	0.28	-2.4
5,017,902	+		PFLU_RS22305	0.28	-0.3
5,017,902	+		PFLU_RS22305	0.28	+1.1
5,017,903	-		PFLU_RS22305	0.28	+1.9
5,017,903	-		PFLU_RS22305	0.28	+1.1
5,017,903	-		PFLU_RS22305	0.28	+1.6
5,017,962	+		PFLU_RS22305	0.36	-0.2
5,017,962	+		PFLU_RS22305	0.36	+3.1
5,017,962	+		PFLU_RS22305	0.36	-0.1
5,017,963	-		PFLU_RS22305	0.36	-2.5
5,017,963	-		PFLU_RS22305	0.36	+0.6
5,017,963	-		PFLU_RS22305	0.36	-2.1
5,017,963	-		PFLU_RS22305	0.36	+1.4
5,018,179	+		PFLU_RS22305	0.63	+2.4
5,018,179	+		PFLU_RS22305	0.63	-1.3
5,018,179	+		PFLU_RS22305	0.63	+1.1
5,018,179	+		PFLU_RS22305	0.63	+1.1
5,018,179	+		PFLU_RS22305	0.63	+0.3
5,018,180	-		PFLU_RS22305	0.63	+1.3
5,018,180	-		PFLU_RS22305	0.63	-0.4
5,018,217	+		PFLU_RS22305	0.68	+0.6
5,018,217	+		PFLU_RS22305	0.68	+0.4
5,018,217	+		PFLU_RS22305	0.68	+2.1
5,018,217	+		PFLU_RS22305	0.68	+2.5
5,018,217	+		PFLU_RS22305	0.68	-1.4
5,018,218	-		PFLU_RS22305	0.68	-0.7
5,018,218	-		PFLU_RS22305	0.68	-0.7
5,018,218	-		PFLU_RS22305	0.68	-2.0
5,018,221	+		PFLU_RS22305	0.68	+1.7
5,018,221	+		PFLU_RS22305	0.68	+0.9
5,018,221	+		PFLU_RS22305	0.68	-1.0
5,018,221	+		PFLU_RS22305	0.68	+3.8
5,018,221	+		PFLU_RS22305	0.68	+0.5
5,018,221	+		PFLU_RS22305	0.68	+0.8
5,018,221	+		PFLU_RS22305	0.68	+0.1
5,018,221	+		PFLU_RS22305	0.68	+1.1
5,018,221	+		PFLU_RS22305	0.68	-1.3
5,018,221	+		PFLU_RS22305	0.68	+0.1
5,018,221	+		PFLU_RS22305	0.68	-1.9
5,018,221	+		PFLU_RS22305	0.68	-1.7
5,018,222	-		PFLU_RS22305	0.68	+0.6
5,018,222	-		PFLU_RS22305	0.68	+1.1
5,018,222	-		PFLU_RS22305	0.68	+0.3
5,018,222	-		PFLU_RS22305	0.68	-0.7
5,018,222	-		PFLU_RS22305	0.68	-1.9
5,018,222	-		PFLU_RS22305	0.68	-0.2
5,018,222	-		PFLU_RS22305	0.68	-0.6
5,018,222	-		PFLU_RS22305	0.68	+0.4
5,018,222	-		PFLU_RS22305	0.68	-1.9
5,018,222	-		PFLU_RS22305	0.68	+0.6
5,018,222	-		PFLU_RS22305	0.68	+1.9
5,018,222	-		PFLU_RS22305	0.68	+3.4
5,018,222	-		PFLU_RS22305	0.68	+1.3
5,018,222	-		PFLU_RS22305	0.68	+1.9
5,018,259	+		PFLU_RS22305	0.73	+1.7
5,018,259	+		PFLU_RS22305	0.73	+1.0
5,018,259	+		PFLU_RS22305	0.73	+0.9
5,018,260	-		PFLU_RS22305	0.73	+0.2
5,018,364	+		PFLU_RS22305	0.86	+1.1
5,018,365	-		PFLU_RS22305	0.86	+3.3
5,018,447	+				-1.4
5,018,447	+				+2.1
5,018,448	-				+0.4
5,018,448	-				+0.6
5,018,448	-				-1.6
5,018,452	-				-2.3
5,018,484	+				+0.0
5,018,484	+				+1.6
5,018,485	-				+0.9
5,018,485	-				-1.9
5,018,489	+				+2.0
5,018,550	+				+0.6
5,018,551	-				-1.9
5,018,554	-				-0.5
5,018,580	+				-1.0
5,018,580	+				-1.9
5,018,580	+				-1.0
5,018,580	+				-1.3
5,018,581	-				-0.3
5,018,581	-				-1.4
5,018,581	-				-2.7
5,018,581	-				+0.8
5,018,638	+				-0.6
5,018,638	+				-1.8
5,018,638	+				-2.3
5,018,638	+				-0.6
5,018,639	-				-0.6
5,018,639	-				-3.1
5,018,639	-				-1.2
5,018,748	+		PFLU_RS22310	0.13	-0.2
5,018,748	+		PFLU_RS22310	0.13	+0.2
5,018,748	+		PFLU_RS22310	0.13	-2.4
5,018,748	+		PFLU_RS22310	0.13	-0.5
5,018,748	+		PFLU_RS22310	0.13	-2.1
5,018,748	+		PFLU_RS22310	0.13	+0.1
5,018,748	+		PFLU_RS22310	0.13	-0.9
5,018,748	+		PFLU_RS22310	0.13	-0.9
5,018,748	+		PFLU_RS22310	0.13	+0.2
5,018,748	+		PFLU_RS22310	0.13	-3.3
5,018,748	+		PFLU_RS22310	0.13	-0.3
5,018,748	+		PFLU_RS22310	0.13	-0.6
5,018,748	+		PFLU_RS22310	0.13	-3.2
5,018,748	+		PFLU_RS22310	0.13	-1.0
5,018,748	+		PFLU_RS22310	0.13	-0.3
5,018,748	+		PFLU_RS22310	0.13	-1.6
5,018,749	-		PFLU_RS22310	0.13	+0.6
5,018,749	-		PFLU_RS22310	0.13	-2.1
5,018,749	-		PFLU_RS22310	0.13	-0.9
5,018,749	-		PFLU_RS22310	0.13	-1.1
5,018,749	-		PFLU_RS22310	0.13	-0.7
5,018,749	-		PFLU_RS22310	0.13	-0.2
5,018,749	-		PFLU_RS22310	0.13	-1.3
5,018,749	-		PFLU_RS22310	0.13	-0.2
5,018,749	-		PFLU_RS22310	0.13	-1.2
5,018,749	-		PFLU_RS22310	0.13	+0.6
5,018,749	-		PFLU_RS22310	0.13	-1.1
5,018,749	-		PFLU_RS22310	0.13	-0.6
5,018,749	-		PFLU_RS22310	0.13	-2.1
5,018,749	-		PFLU_RS22310	0.13	-2.3
5,018,749	-		PFLU_RS22310	0.13	-0.7
5,018,749	-		PFLU_RS22310	0.13	-0.2
5,018,749	-		PFLU_RS22310	0.13	-0.4
5,018,749	-		PFLU_RS22310	0.13	-1.4
5,018,749	-		PFLU_RS22310	0.13	-0.6
5,018,749	-		PFLU_RS22310	0.13	-3.1
5,018,749	-		PFLU_RS22310	0.13	-2.0
5,018,821	+		PFLU_RS22310	0.18	-2.5
5,018,836	+		PFLU_RS22310	0.19	-0.8
5,018,837	-		PFLU_RS22310	0.19	-0.1
5,018,875	+		PFLU_RS22310	0.21	-0.3
5,018,875	+		PFLU_RS22310	0.21	-1.3
5,018,932	+		PFLU_RS22310	0.25	-2.6
5,018,932	+		PFLU_RS22310	0.25	-1.2
5,018,932	+		PFLU_RS22310	0.25	-1.4
5,018,932	+		PFLU_RS22310	0.25	-1.4
5,018,933	-		PFLU_RS22310	0.25	+0.5
5,018,933	-		PFLU_RS22310	0.25	+0.8
5,018,976	+		PFLU_RS22310	0.28	-2.8
5,018,976	+		PFLU_RS22310	0.28	-0.9
5,018,976	+		PFLU_RS22310	0.28	-0.7
5,018,976	+		PFLU_RS22310	0.28	-1.1
5,018,977	-		PFLU_RS22310	0.28	-0.8
5,018,977	-		PFLU_RS22310	0.28	+0.7
5,018,977	-		PFLU_RS22310	0.28	+0.2
5,018,977	-		PFLU_RS22310	0.28	-4.1
5,019,012	+		PFLU_RS22310	0.30	-2.8
5,019,013	-		PFLU_RS22310	0.30	-0.0
5,019,196	+		PFLU_RS22310	0.42	-0.0
5,019,196	+		PFLU_RS22310	0.42	-1.5
5,019,196	+		PFLU_RS22310	0.42	-2.8
5,019,197	-		PFLU_RS22310	0.42	-1.0
5,019,197	-		PFLU_RS22310	0.42	-2.1
5,019,197	-		PFLU_RS22310	0.42	-0.2
5,019,197	-		PFLU_RS22310	0.42	-0.7
5,019,197	-		PFLU_RS22310	0.42	-2.2
5,019,197	-		PFLU_RS22310	0.42	-1.7
5,019,197	-		PFLU_RS22310	0.42	-1.8
5,019,197	-		PFLU_RS22310	0.42	-0.2
5,019,244	-		PFLU_RS22310	0.45	+0.5
5,019,261	+		PFLU_RS22310	0.46	+1.6
5,019,261	+		PFLU_RS22310	0.46	-4.1
5,019,261	+		PFLU_RS22310	0.46	-0.4
5,019,261	+		PFLU_RS22310	0.46	+0.2
5,019,261	+		PFLU_RS22310	0.46	-2.0
5,019,261	+		PFLU_RS22310	0.46	-3.5
5,019,262	-		PFLU_RS22310	0.46	-3.2
5,019,262	-		PFLU_RS22310	0.46	-1.2
5,019,262	-		PFLU_RS22310	0.46	+0.7
5,019,262	-		PFLU_RS22310	0.46	-1.7
5,019,262	-		PFLU_RS22310	0.46	-1.0
5,019,262	-		PFLU_RS22310	0.46	-0.5
5,019,262	-		PFLU_RS22310	0.46	-2.0
5,019,262	-		PFLU_RS22310	0.46	-3.5
5,019,262	-		PFLU_RS22310	0.46	-1.2
5,019,262	-		PFLU_RS22310	0.46	+2.3
5,019,339	+		PFLU_RS22310	0.51	-2.1
5,019,339	+		PFLU_RS22310	0.51	-1.2
5,019,339	+		PFLU_RS22310	0.51	-0.3
5,019,339	+		PFLU_RS22310	0.51	-1.2
5,019,340	-		PFLU_RS22310	0.51	-1.6
5,019,340	-		PFLU_RS22310	0.51	-0.4