Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS09240

Experiment: propionate 20 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	propionate 20 mM (C)
2,044,404	+		PFLU_RS09235	0.19	+0.1
2,044,404	+		PFLU_RS09235	0.19	-0.8
2,044,404	+		PFLU_RS09235	0.19	+1.0
2,044,404	+		PFLU_RS09235	0.19	-1.7
2,044,404	+		PFLU_RS09235	0.19	+0.4
2,044,404	+		PFLU_RS09235	0.19	-1.3
2,044,404	+		PFLU_RS09235	0.19	-0.3
2,044,404	+		PFLU_RS09235	0.19	+0.7
2,044,405	-		PFLU_RS09235	0.19	-0.6
2,044,405	-		PFLU_RS09235	0.19	-0.6
2,044,405	-		PFLU_RS09235	0.19	-0.8
2,044,405	-		PFLU_RS09235	0.19	-1.9
2,044,484	+		PFLU_RS09235	0.26	-0.4
2,044,576	+		PFLU_RS09235	0.34	-1.9
2,044,577	-		PFLU_RS09235	0.34	-1.7
2,044,782	+		PFLU_RS09235	0.52	-0.4
2,044,782	+		PFLU_RS09235	0.52	-1.3
2,044,782	+		PFLU_RS09235	0.52	+0.4
2,044,782	+		PFLU_RS09235	0.52	+1.3
2,044,782	+		PFLU_RS09235	0.52	-0.9
2,044,782	+		PFLU_RS09235	0.52	-1.3
2,044,782	+		PFLU_RS09235	0.52	-1.8
2,044,782	+		PFLU_RS09235	0.52	-2.0
2,044,782	+		PFLU_RS09235	0.52	+0.4
2,044,782	+		PFLU_RS09235	0.52	-2.5
2,044,782	+		PFLU_RS09235	0.52	-0.6
2,044,783	-		PFLU_RS09235	0.52	-2.1
2,044,783	-		PFLU_RS09235	0.52	+1.3
2,044,783	-		PFLU_RS09235	0.52	+0.7
2,044,856	+		PFLU_RS09235	0.59	-0.3
2,044,856	+		PFLU_RS09235	0.59	-1.1
2,044,856	+		PFLU_RS09235	0.59	+0.8
2,044,856	+		PFLU_RS09235	0.59	+1.2
2,044,857	-		PFLU_RS09235	0.59	-0.2
2,044,857	-		PFLU_RS09235	0.59	-1.1
2,044,857	-		PFLU_RS09235	0.59	-1.8
2,044,857	-		PFLU_RS09235	0.59	+0.3
2,044,857	-		PFLU_RS09235	0.59	-0.8
2,044,857	-		PFLU_RS09235	0.59	+1.8
2,044,857	-		PFLU_RS09235	0.59	-0.3
2,044,857	-		PFLU_RS09235	0.59	-2.6
2,044,857	-		PFLU_RS09235	0.59	+1.3
2,044,857	-		PFLU_RS09235	0.59	-0.1
2,045,085	+		PFLU_RS09235	0.79	-1.9
2,045,129	+		PFLU_RS09235	0.82	+2.0
2,045,129	+		PFLU_RS09235	0.82	+0.7
2,045,129	+		PFLU_RS09235	0.82	-0.9
2,045,130	-		PFLU_RS09235	0.83	-1.9
2,045,148	+		PFLU_RS09235	0.84	+0.7
2,045,148	+		PFLU_RS09235	0.84	-1.3
2,045,148	+		PFLU_RS09235	0.84	+0.3
2,045,148	+		PFLU_RS09235	0.84	-1.1
2,045,148	+		PFLU_RS09235	0.84	+2.0
2,045,148	+		PFLU_RS09235	0.84	-1.3
2,045,148	+		PFLU_RS09235	0.84	-1.7
2,045,148	+		PFLU_RS09235	0.84	+0.7
2,045,148	+		PFLU_RS09235	0.84	+0.2
2,045,148	+		PFLU_RS09235	0.84	+1.2
2,045,148	+		PFLU_RS09235	0.84	+2.0
2,045,148	+		PFLU_RS09235	0.84	-0.9
2,045,148	+		PFLU_RS09235	0.84	-0.6
2,045,149	-		PFLU_RS09235	0.84	+0.0
2,045,149	-		PFLU_RS09235	0.84	-2.7
2,045,149	-		PFLU_RS09235	0.84	-0.6
2,045,149	-		PFLU_RS09235	0.84	-0.3
2,045,149	-		PFLU_RS09235	0.84	+0.4
2,045,149	-		PFLU_RS09235	0.84	+0.1
2,045,149	-		PFLU_RS09235	0.84	+0.6
2,045,149	-		PFLU_RS09235	0.84	-2.1
2,045,149	-		PFLU_RS09235	0.84	+0.0
2,045,149	-		PFLU_RS09235	0.84	+1.0
2,045,277	+				-1.3
2,045,278	-				+0.6
2,045,278	-				+0.9
2,045,278	-				-1.4
2,045,278	-				+0.1
2,045,279	+				-1.1
2,045,279	+				+0.8
2,045,279	+				+0.6
2,045,279	+				-1.0
2,045,279	+				+2.5
2,045,279	+				-1.3
2,045,279	+				-1.1
2,045,280	-				-3.5
2,045,280	-				+1.1
2,045,317	+				-1.7
2,045,324	+				-0.5
2,045,324	+				+1.0
2,045,324	+				+2.8
2,045,325	-				+2.0
2,045,325	-				-2.5
2,045,325	-				+0.4
2,045,325	-				-1.3
2,045,328	+				-0.3
2,045,328	+				-1.0
2,045,328	+				-1.2
2,045,328	+				+0.4
2,045,328	+				+1.2
2,045,328	+				-1.1
2,045,328	+				+0.6
2,045,328	+				-0.9
2,045,328	+				+0.9
2,045,328	+				-0.4
2,045,328	+				+1.0
2,045,328	+				+2.3
2,045,328	+				+0.8
2,045,329	-				-1.0
2,045,329	-				-1.7
2,045,329	-				-2.0
2,045,329	-				-1.8
2,045,338	+				-1.6
2,045,338	+				+1.2
2,045,339	-				-1.4
2,045,339	-				+0.2
2,045,339	-				-0.8
2,045,342	+				-0.4
2,045,342	+				+1.4
2,045,342	+				-0.1
2,045,343	-				+0.4
2,045,343	-				+1.1
2,045,343	-				-1.8
2,045,343	-				-1.7
2,045,365	+				+3.0
2,045,376	-				+2.0
2,045,521	+				+0.1
2,045,521	+				+0.0
2,045,521	+				+1.3
2,045,521	+				-1.0
2,045,521	+				+0.4
2,045,522	-				+1.0
2,045,522	-				-0.8
2,045,786	-		PFLU_RS09240	0.21	+0.0
2,045,914	+		PFLU_RS09240	0.28	-0.8
2,045,915	-		PFLU_RS09240	0.28	+1.6
2,045,962	+		PFLU_RS09240	0.30	-1.3
2,045,963	-		PFLU_RS09240	0.30	+1.7
2,045,963	-		PFLU_RS09240	0.30	-2.4
2,046,027	+		PFLU_RS09240	0.34	+1.0
2,046,027	+		PFLU_RS09240	0.34	+1.6
2,046,028	-		PFLU_RS09240	0.34	+0.9
2,046,028	-		PFLU_RS09240	0.34	-1.0
2,046,133	+		PFLU_RS09240	0.39	+0.5
2,046,133	+		PFLU_RS09240	0.39	+2.0
2,046,134	-		PFLU_RS09240	0.39	+0.4
2,046,155	-		PFLU_RS09240	0.41	+0.4
2,046,172	+		PFLU_RS09240	0.41	+1.6
2,046,172	+		PFLU_RS09240	0.41	+1.0
2,046,172	+		PFLU_RS09240	0.41	+2.4
2,046,172	+		PFLU_RS09240	0.41	+0.4
2,046,172	+		PFLU_RS09240	0.41	-0.6
2,046,172	+		PFLU_RS09240	0.41	+1.0
2,046,172	+		PFLU_RS09240	0.41	+0.8
2,046,204	+		PFLU_RS09240	0.43	+2.3
2,046,265	-		PFLU_RS09240	0.46	+0.3
2,046,285	-		PFLU_RS09240	0.47	-2.4
2,046,391	+		PFLU_RS09240	0.53	+1.0
2,046,391	+		PFLU_RS09240	0.53	+0.8
2,046,451	+		PFLU_RS09240	0.56	-2.7
2,046,451	+		PFLU_RS09240	0.56	+2.5
2,046,451	+		PFLU_RS09240	0.56	-1.0
2,046,451	+		PFLU_RS09240	0.56	+0.6
2,046,451	+		PFLU_RS09240	0.56	-2.6
2,046,451	+		PFLU_RS09240	0.56	-0.9
2,046,452	-		PFLU_RS09240	0.56	-0.1
2,046,452	-		PFLU_RS09240	0.56	-0.4
2,046,452	-		PFLU_RS09240	0.56	-2.3
2,046,452	-		PFLU_RS09240	0.56	+0.4
2,046,452	-		PFLU_RS09240	0.56	-0.2
2,046,452	-		PFLU_RS09240	0.56	-1.6
2,046,453	+		PFLU_RS09240	0.56	+0.2
2,046,453	+		PFLU_RS09240	0.56	-1.6
2,046,453	+		PFLU_RS09240	0.56	+0.6
2,046,454	-		PFLU_RS09240	0.57	-0.3
2,046,454	-		PFLU_RS09240	0.57	+1.1
2,046,466	+		PFLU_RS09240	0.57	-1.4
2,046,466	+		PFLU_RS09240	0.57	-1.2
2,046,466	+		PFLU_RS09240	0.57	-0.2
2,046,466	+		PFLU_RS09240	0.57	+3.6
2,046,467	-		PFLU_RS09240	0.57	+0.4
2,046,467	-		PFLU_RS09240	0.57	-1.4
2,046,467	-		PFLU_RS09240	0.57	-1.6
2,046,652	+		PFLU_RS09240	0.67	+0.6
2,046,652	+		PFLU_RS09240	0.67	-0.8
2,046,652	+		PFLU_RS09240	0.67	-2.3
2,046,652	+		PFLU_RS09240	0.67	-2.3
2,046,652	+		PFLU_RS09240	0.67	-0.6
2,046,652	+		PFLU_RS09240	0.67	+1.0
2,046,652	+		PFLU_RS09240	0.67	-1.0
2,046,652	+		PFLU_RS09240	0.67	-1.8
2,046,652	+		PFLU_RS09240	0.67	+1.8
2,046,652	+		PFLU_RS09240	0.67	+2.9
2,046,652	+		PFLU_RS09240	0.67	+0.9
2,046,652	+		PFLU_RS09240	0.67	-0.2
2,046,652	+		PFLU_RS09240	0.67	+1.7
2,046,652	+		PFLU_RS09240	0.67	+2.0
2,046,652	+		PFLU_RS09240	0.67	+3.0
2,046,652	+		PFLU_RS09240	0.67	+1.2
2,046,652	+		PFLU_RS09240	0.67	+2.3
2,046,652	+		PFLU_RS09240	0.67	+0.3
2,046,652	+		PFLU_RS09240	0.67	+2.3
2,046,653	-		PFLU_RS09240	0.67	-2.1
2,046,653	-		PFLU_RS09240	0.67	+0.7
2,046,653	-		PFLU_RS09240	0.67	+0.4
2,046,653	-		PFLU_RS09240	0.67	+0.4
2,046,653	-		PFLU_RS09240	0.67	-1.0
2,046,653	-		PFLU_RS09240	0.67	-1.7
2,046,653	-		PFLU_RS09240	0.67	+1.8
2,046,653	-		PFLU_RS09240	0.67	-1.7
2,046,653	-		PFLU_RS09240	0.67	+0.4
2,046,653	-		PFLU_RS09240	0.67	+1.5
2,046,653	-		PFLU_RS09240	0.67	-0.6
2,046,653	-		PFLU_RS09240	0.67	-0.8
2,046,653	-		PFLU_RS09240	0.67	-0.1
2,046,653	-		PFLU_RS09240	0.67	-0.8
2,046,653	-		PFLU_RS09240	0.67	-2.1
2,046,653	-		PFLU_RS09240	0.67	-1.9
2,046,653	-		PFLU_RS09240	0.67	-2.7
2,046,653	-		PFLU_RS09240	0.67	-0.3
2,046,653	-		PFLU_RS09240	0.67	+1.6
2,046,653	-		PFLU_RS09240	0.67	-0.3
2,046,718	+		PFLU_RS09240	0.71	+2.2
2,046,718	+		PFLU_RS09240	0.71	+1.6
2,046,718	+		PFLU_RS09240	0.71	+1.7
2,046,718	+		PFLU_RS09240	0.71	+1.2
2,046,719	-		PFLU_RS09240	0.71	+0.4
2,046,719	-		PFLU_RS09240	0.71	+0.0
2,046,850	+		PFLU_RS09240	0.78	+1.4
2,046,850	+		PFLU_RS09240	0.78	+1.4
2,046,850	+		PFLU_RS09240	0.78	-1.3
2,046,850	+		PFLU_RS09240	0.78	+0.4
2,046,851	-		PFLU_RS09240	0.78	-0.6
2,046,851	-		PFLU_RS09240	0.78	+2.0
2,046,851	-		PFLU_RS09240	0.78	+1.0
2,046,851	-		PFLU_RS09240	0.78	-0.4
2,046,851	-		PFLU_RS09240	0.78	-0.6
2,046,851	-		PFLU_RS09240	0.78	-0.1
2,046,851	-		PFLU_RS09240	0.78	+0.3
2,046,851	-		PFLU_RS09240	0.78	-1.3
2,046,851	-		PFLU_RS09240	0.78	-2.2
2,046,851	-		PFLU_RS09240	0.78	+0.4
2,046,851	-		PFLU_RS09240	0.78	-0.1
2,046,853	+		PFLU_RS09240	0.78	+2.8
2,046,853	+		PFLU_RS09240	0.78	+3.0
2,046,853	+		PFLU_RS09240	0.78	-2.4
2,046,853	+		PFLU_RS09240	0.78	-0.8
2,046,854	-		PFLU_RS09240	0.78	+0.0
2,046,854	-		PFLU_RS09240	0.78	-1.7
2,046,854	-		PFLU_RS09240	0.78	-0.4
2,046,854	-		PFLU_RS09240	0.78	-1.0
2,046,854	-		PFLU_RS09240	0.78	-0.3
2,046,854	-		PFLU_RS09240	0.78	+1.4
2,046,862	+		PFLU_RS09240	0.78	-3.0
2,046,862	+		PFLU_RS09240	0.78	+1.4
2,046,863	-		PFLU_RS09240	0.78	-1.0
2,046,863	-		PFLU_RS09240	0.78	-2.1
2,046,863	-		PFLU_RS09240	0.78	+2.9
2,046,863	-		PFLU_RS09240	0.78	+0.0
2,046,863	-		PFLU_RS09240	0.78	+3.0
2,046,879	+		PFLU_RS09240	0.79	-0.4
2,046,879	+		PFLU_RS09240	0.79	+0.4
2,046,879	+		PFLU_RS09240	0.79	-2.8
2,046,879	+		PFLU_RS09240	0.79	+1.6
2,046,879	+		PFLU_RS09240	0.79	+2.0
2,046,879	+		PFLU_RS09240	0.79	-3.0
2,046,879	+		PFLU_RS09240	0.79	+0.4
2,046,880	-		PFLU_RS09240	0.79	+1.6
2,046,880	-		PFLU_RS09240	0.79	-1.7
2,046,943	+		PFLU_RS09240	0.83	-0.1
2,046,944	-		PFLU_RS09240	0.83	+2.3
2,046,973	+		PFLU_RS09240	0.84	-2.0
2,046,973	+		PFLU_RS09240	0.84	-0.5
2,046,974	-		PFLU_RS09240	0.84	+1.4
2,047,059	-		PFLU_RS09240	0.89	-1.3
2,047,264	+				-2.1
2,047,264	+				+0.7
2,047,264	+				-1.2
2,047,264	+				-0.6
2,047,264	+				+1.3
2,047,264	+				-2.8
2,047,265	-				-0.8
2,047,265	-				-1.1
2,047,265	-				+0.3
2,047,265	-				+3.7
2,047,265	-				+1.0
2,047,265	-				-2.2
2,047,265	-				+0.0
2,047,281	-				+0.0
2,047,281	-				+4.3
2,047,283	-				-1.9
2,047,330	+				+0.2
2,047,330	+				+0.0
2,047,330	+				-1.7
2,047,399	-				-2.5
2,047,448	+		PFLU_RS09245	0.23	+0.6
2,047,448	+		PFLU_RS09245	0.23	+0.6
2,047,448	+		PFLU_RS09245	0.23	+1.1
2,047,448	+		PFLU_RS09245	0.23	-1.6
2,047,448	+		PFLU_RS09245	0.23	+2.8
2,047,449	-		PFLU_RS09245	0.23	+1.0
2,047,467	-		PFLU_RS09245	0.29	-2.2
2,047,516	+		PFLU_RS09245	0.44	+0.2
2,047,516	+		PFLU_RS09245	0.44	+1.2
2,047,516	+		PFLU_RS09245	0.44	-2.0
2,047,516	+		PFLU_RS09245	0.44	-0.8
2,047,516	+		PFLU_RS09245	0.44	+2.0
2,047,627	+		PFLU_RS09245	0.79	-0.7
2,047,627	+		PFLU_RS09245	0.79	+2.0
2,047,628	-		PFLU_RS09245	0.80	-1.1
2,047,628	-		PFLU_RS09245	0.80	+1.4
2,047,628	-		PFLU_RS09245	0.80	+1.1
2,047,702	+				+2.2
2,047,702	+				-1.1
2,047,702	+				+0.4
2,047,702	+				-0.2
2,047,702	+				-1.4
2,047,702	+				-2.2
2,047,702	+				-1.1
2,047,703	-				-0.2
2,047,703	-				+0.4
2,047,703	-				-0.8
2,047,703	-				-1.3
2,047,703	-				+0.0
2,047,703	-				+0.9
2,047,703	-				-1.0
2,047,705	+				-1.0
2,047,705	+				-0.5
2,047,705	+				-0.8
2,047,705	+				-1.3
2,047,705	+				-0.8
2,047,705	+				-0.6
2,047,705	+				-2.4
2,047,705	+				+0.4
2,047,705	+				-0.3
2,047,706	-				+0.9
2,047,706	-				+2.2
2,047,706	-				+1.3
2,047,706	-				+1.0
2,047,706	-				-1.8
2,047,706	-				+0.3
2,047,706	-				-1.1
2,047,706	-				-1.9
2,047,708	+				+1.0
2,047,708	+				+0.7
2,047,708	+				-0.9
2,047,708	+				-0.3
2,047,708	+				-1.1
2,047,708	+				-1.6
2,047,708	+				+0.0
2,047,708	+				-1.0
2,047,709	-				-0.3
2,047,709	-				+1.4
2,047,709	-				-1.3
2,047,709	-				+1.8
2,047,709	-				-2.1
2,047,709	-				-0.6
2,047,709	-				-3.0
2,047,709	-				+0.9
2,047,709	-				+1.6
2,047,709	-				+1.9
2,047,709	-				-1.0
2,047,709	-				+0.7
2,047,709	-				-1.6
2,047,709	-				-0.3
2,047,709	-				+0.1
2,047,729	+				-0.5
2,047,730	-				-2.2
2,047,859	+				-0.5
2,047,859	+				-0.5
2,047,860	-				-1.8
2,047,860	-				+0.8
2,047,860	-				+2.5
2,047,860	-				+0.4
2,047,884	+				+0.4
2,047,885	-				-1.6
2,048,043	-		PFLU_RS09250	0.25	-1.3
2,048,043	-		PFLU_RS09250	0.25	-1.3
2,048,188	+		PFLU_RS09250	0.40	+2.0