Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS05155

Experiment: propionate 20 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	propionate 20 mM (C)
1,148,781	+		PFLU_RS05150	0.42	-0.4
1,148,781	+		PFLU_RS05150	0.42	-1.0
1,148,781	+		PFLU_RS05150	0.42	-1.3
1,148,781	+		PFLU_RS05150	0.42	-1.0
1,148,781	+		PFLU_RS05150	0.42	-0.1
1,148,781	+		PFLU_RS05150	0.42	-0.4
1,148,781	+		PFLU_RS05150	0.42	+1.7
1,148,781	+		PFLU_RS05150	0.42	+1.9
1,148,782	-		PFLU_RS05150	0.42	+1.6
1,148,782	-		PFLU_RS05150	0.42	-0.4
1,148,782	-		PFLU_RS05150	0.42	-1.3
1,148,782	-		PFLU_RS05150	0.42	+0.6
1,148,782	-		PFLU_RS05150	0.42	-0.0
1,148,782	-		PFLU_RS05150	0.42	-0.2
1,148,782	-		PFLU_RS05150	0.42	-0.1
1,148,782	-		PFLU_RS05150	0.42	-1.6
1,148,782	-		PFLU_RS05150	0.42	+0.2
1,148,782	-		PFLU_RS05150	0.42	-0.7
1,148,782	-		PFLU_RS05150	0.42	-0.6
1,148,782	-		PFLU_RS05150	0.42	+0.0
1,148,782	-		PFLU_RS05150	0.42	+0.4
1,148,782	-		PFLU_RS05150	0.42	-0.6
1,148,813	-		PFLU_RS05150	0.44	-0.7
1,148,994	+		PFLU_RS05150	0.56	+1.2
1,148,994	+		PFLU_RS05150	0.56	-0.1
1,148,994	+		PFLU_RS05150	0.56	+0.9
1,148,995	-		PFLU_RS05150	0.56	+0.7
1,148,995	-		PFLU_RS05150	0.56	+0.7
1,149,375	-		PFLU_RS05150	0.81	+0.2
1,149,474	+		PFLU_RS05150	0.87	+0.5
1,149,474	+		PFLU_RS05150	0.87	-1.4
1,149,475	-		PFLU_RS05150	0.87	-1.5
1,149,475	-		PFLU_RS05150	0.87	-0.6
1,149,475	-		PFLU_RS05150	0.87	-0.4
1,149,771	+				-0.2
1,149,771	+				+0.7
1,149,771	+				+0.2
1,149,771	+				-1.4
1,149,771	+				+0.4
1,149,771	+				-0.5
1,149,771	+				+0.9
1,149,771	+				+1.2
1,149,772	-				+1.0
1,149,923	+		PFLU_RS05155	0.17	-0.4
1,149,923	+		PFLU_RS05155	0.17	+0.8
1,149,924	-		PFLU_RS05155	0.17	-1.3
1,149,934	-		PFLU_RS05155	0.18	+1.4
1,149,970	+		PFLU_RS05155	0.22	-0.1
1,149,970	+		PFLU_RS05155	0.22	+1.0
1,149,970	+		PFLU_RS05155	0.22	+1.0
1,149,971	-		PFLU_RS05155	0.22	+0.4
1,149,971	-		PFLU_RS05155	0.22	+1.7
1,149,971	-		PFLU_RS05155	0.22	+0.2
1,149,971	-		PFLU_RS05155	0.22	+1.7
1,149,971	-		PFLU_RS05155	0.22	-0.1
1,149,973	+		PFLU_RS05155	0.22	+0.2
1,149,973	+		PFLU_RS05155	0.22	-0.1
1,149,973	+		PFLU_RS05155	0.22	+0.4
1,149,973	+		PFLU_RS05155	0.22	+1.3
1,149,973	+		PFLU_RS05155	0.22	-0.9
1,149,974	-		PFLU_RS05155	0.22	-1.0
1,149,974	-		PFLU_RS05155	0.22	+0.3
1,149,974	-		PFLU_RS05155	0.22	+1.6
1,149,974	-		PFLU_RS05155	0.22	+1.0
1,149,974	-		PFLU_RS05155	0.22	+0.8
1,149,974	-		PFLU_RS05155	0.22	-1.5
1,150,093	+		PFLU_RS05155	0.35	-0.6
1,150,093	+		PFLU_RS05155	0.35	+0.9
1,150,094	-		PFLU_RS05155	0.35	+1.3
1,150,109	+		PFLU_RS05155	0.37	+1.0
1,150,109	+		PFLU_RS05155	0.37	-2.7
1,150,110	-		PFLU_RS05155	0.37	-1.6
1,150,125	+		PFLU_RS05155	0.39	-0.6
1,150,125	+		PFLU_RS05155	0.39	+2.1
1,150,125	+		PFLU_RS05155	0.39	+1.1
1,150,126	-		PFLU_RS05155	0.39	+0.2
1,150,291	+		PFLU_RS05155	0.57	+2.2
1,150,291	+		PFLU_RS05155	0.57	-0.0
1,150,292	-		PFLU_RS05155	0.57	-0.1
1,150,292	-		PFLU_RS05155	0.57	-1.0
1,150,292	-		PFLU_RS05155	0.57	-0.4
1,150,292	-		PFLU_RS05155	0.57	+2.7
1,150,292	-		PFLU_RS05155	0.57	+0.1
1,150,355	-		PFLU_RS05155	0.64	-0.5
1,150,523	-		PFLU_RS05155	0.82	-0.9
1,150,681	+				+2.1
1,150,681	+				-0.4
1,150,681	+				-2.3
1,150,681	+				-0.3
1,150,699	+				+0.7
1,150,699	+				+0.9
1,150,699	+				+0.5
1,150,699	+				+1.6
1,150,699	+				-1.3
1,150,699	+				+0.2
1,150,699	+				+0.6
1,150,699	+				+0.9
1,150,699	+				-2.9
1,150,699	+				-0.7
1,150,700	-				+0.2
1,150,700	-				-1.4
1,150,700	-				+1.0
1,150,700	-				-0.7
1,150,700	-				+0.7
1,150,700	-				-2.7
1,150,700	-				+0.3
1,150,700	-				-0.0
1,150,700	-				+0.8
1,150,700	-				+2.2
1,150,700	-				-1.3
1,150,700	-				+1.2
1,150,770	+				+0.0
1,150,770	+				+0.2
1,150,770	+				+0.8
1,150,770	+				+0.2
1,150,770	+				+2.2
1,150,770	+				-0.0
1,150,770	+				+1.3
1,150,771	-				+0.2
1,150,771	-				-0.4
1,150,771	-				-1.3
1,150,813	+				+1.5
1,150,813	+				-2.5
1,150,813	+				+1.2
1,150,813	+				-0.8
1,150,813	+				-1.0
1,150,813	+				-0.6
1,150,813	+				-1.6
1,150,813	+				-1.6
1,150,813	+				-2.7
1,150,813	+				-0.0
1,150,813	+				-0.3
1,150,813	+				+1.2
1,150,813	+				+1.0
1,150,813	+				+0.3
1,150,813	+				-0.4
1,150,813	+				+1.2
1,150,813	+				+1.5
1,150,814	-				+0.4
1,150,814	-				+0.2
1,150,814	-				-1.4
1,150,814	-				-1.4
1,150,814	-				+0.2
1,150,814	-				+0.2
1,150,814	-				-2.3
1,150,814	-				-1.0
1,150,814	-				+3.2
1,150,814	-				-0.3
1,150,814	-				-2.2
1,150,814	-				+0.3
1,150,814	-				-1.0
1,150,814	-				+2.6
1,150,814	-				-2.0
1,150,814	-				-1.5
1,150,814	-				+0.1
1,150,837	+				+1.0
1,150,837	+				-1.4
1,150,837	+				+0.1
1,150,837	+				+1.4
1,150,837	+				-2.0
1,150,837	+				-1.1
1,150,838	-				-1.1
1,150,838	-				+1.2
1,150,838	-				-0.8
1,150,838	-				+2.1
1,150,838	-				-0.0
1,150,838	-				+0.6
1,150,838	-				-0.1
1,150,838	-				-2.4
1,150,838	-				+2.2
1,150,853	+				-0.3
1,150,873	+				+1.6
1,150,873	+				-1.4
1,150,873	+				-0.7
1,150,873	+				+1.4
1,150,873	+				-0.9
1,150,873	+				+2.6
1,150,873	+				+1.2
1,150,873	+				+0.6
1,150,873	+				+1.2
1,150,873	+				-1.0
1,150,873	+				+0.8
1,150,873	+				-2.7
1,150,873	+				+2.4
1,150,873	+				+2.2
1,150,873	+				-1.3
1,150,873	+				+1.0
1,150,873	+				+0.2
1,150,874	-				+1.2
1,150,874	-				+0.2
1,150,874	-				+1.3
1,150,874	-				-2.0
1,150,874	-				-1.0
1,150,874	-				+0.2
1,150,874	-				+1.2
1,150,874	-				-1.6
1,150,874	-				+0.6
1,150,874	-				+1.3
1,150,874	-				-0.1
1,150,874	-				-0.4
1,150,874	-				-0.7
1,150,874	-				+2.9
1,150,874	-				-2.3
1,150,874	-				-0.8
1,150,874	-				-1.0
1,150,874	-				+1.9
1,150,874	-				-1.8
1,150,874	-				-0.3
1,150,876	+				+1.4
1,150,876	+				+1.5
1,150,876	+				+1.2
1,150,876	+				-0.8
1,150,876	+				+2.2
1,150,876	+				+0.9
1,150,877	-				+1.5
1,150,877	-				+0.6
1,150,877	-				-0.1
1,150,877	-				+1.1
1,150,972	+				+0.6
1,150,972	+				+1.6
1,150,972	+				+1.0
1,150,973	-				+2.7
1,150,973	-				-0.3
1,150,973	-				+0.0
1,150,973	-				-1.6
1,150,973	-				-0.1
1,151,050	+		PFLU_RS05160	0.11	+0.7
1,151,051	-		PFLU_RS05160	0.11	+0.5
1,151,051	-		PFLU_RS05160	0.11	-0.3
1,151,089	+		PFLU_RS05160	0.13	-2.0
1,151,090	-		PFLU_RS05160	0.13	+2.7
1,151,090	-		PFLU_RS05160	0.13	-0.8
1,151,090	-		PFLU_RS05160	0.13	-0.4
1,151,090	-		PFLU_RS05160	0.13	+1.3
1,151,179	+		PFLU_RS05160	0.17	+1.8
1,151,179	+		PFLU_RS05160	0.17	+1.7
1,151,179	+		PFLU_RS05160	0.17	-0.5
1,151,179	+		PFLU_RS05160	0.17	+1.9
1,151,179	+		PFLU_RS05160	0.17	+1.0
1,151,179	+		PFLU_RS05160	0.17	-1.3
1,151,179	+		PFLU_RS05160	0.17	-0.4
1,151,179	+		PFLU_RS05160	0.17	+0.5
1,151,179	+		PFLU_RS05160	0.17	+1.5
1,151,179	+		PFLU_RS05160	0.17	+0.2
1,151,179	+		PFLU_RS05160	0.17	+1.3
1,151,180	-		PFLU_RS05160	0.17	+0.7
1,151,180	-		PFLU_RS05160	0.17	+0.6
1,151,180	-		PFLU_RS05160	0.17	-1.5
1,151,180	-		PFLU_RS05160	0.17	+0.4
1,151,180	-		PFLU_RS05160	0.17	-1.4
1,151,185	+		PFLU_RS05160	0.17	-1.7
1,151,185	+		PFLU_RS05160	0.17	-0.1
1,151,185	+		PFLU_RS05160	0.17	-1.6
1,151,185	+		PFLU_RS05160	0.17	+2.4
1,151,185	+		PFLU_RS05160	0.17	-1.5
1,151,186	-		PFLU_RS05160	0.17	-1.8
1,151,186	-		PFLU_RS05160	0.17	+1.0
1,151,186	-		PFLU_RS05160	0.17	+0.9
1,151,186	-		PFLU_RS05160	0.17	+1.3
1,151,186	-		PFLU_RS05160	0.17	+1.6
1,151,186	-		PFLU_RS05160	0.17	-0.1
1,151,186	-		PFLU_RS05160	0.17	+1.5
1,151,186	-		PFLU_RS05160	0.17	+1.0
1,151,194	+		PFLU_RS05160	0.17	+2.1
1,151,194	+		PFLU_RS05160	0.17	+1.0
1,151,194	+		PFLU_RS05160	0.17	+1.9
1,151,194	+		PFLU_RS05160	0.17	-0.1
1,151,194	+		PFLU_RS05160	0.17	+2.1
1,151,194	+		PFLU_RS05160	0.17	+0.6
1,151,195	-		PFLU_RS05160	0.17	+2.4
1,151,195	-		PFLU_RS05160	0.17	+1.0
1,151,195	-		PFLU_RS05160	0.17	-0.5
1,151,195	-		PFLU_RS05160	0.17	-2.3
1,151,195	-		PFLU_RS05160	0.17	+0.9
1,151,195	-		PFLU_RS05160	0.17	-0.8
1,151,195	-		PFLU_RS05160	0.17	+1.2
1,151,195	-		PFLU_RS05160	0.17	-0.4
1,151,195	-		PFLU_RS05160	0.17	+4.5
1,151,239	+		PFLU_RS05160	0.19	+1.2
1,151,239	+		PFLU_RS05160	0.19	-1.0
1,151,239	+		PFLU_RS05160	0.19	+0.6
1,151,240	-		PFLU_RS05160	0.19	-0.2
1,151,240	-		PFLU_RS05160	0.19	+0.2
1,151,240	-		PFLU_RS05160	0.19	+1.7
1,151,240	-		PFLU_RS05160	0.19	-0.5
1,151,240	-		PFLU_RS05160	0.19	-0.5
1,151,240	-		PFLU_RS05160	0.19	-1.6
1,151,240	-		PFLU_RS05160	0.19	-0.9
1,151,317	+		PFLU_RS05160	0.23	-1.0
1,151,318	-		PFLU_RS05160	0.23	+2.4
1,151,377	+		PFLU_RS05160	0.25	+1.3
1,151,378	-		PFLU_RS05160	0.25	-0.6
1,151,455	+		PFLU_RS05160	0.29	-0.9
1,151,456	-		PFLU_RS05160	0.29	+2.0
1,151,456	-		PFLU_RS05160	0.29	+0.9
1,151,456	-		PFLU_RS05160	0.29	-1.1
1,151,518	+		PFLU_RS05160	0.31	+2.2
1,151,518	+		PFLU_RS05160	0.31	+1.3
1,151,519	-		PFLU_RS05160	0.31	+3.5
1,151,519	-		PFLU_RS05160	0.31	+1.0
1,151,519	-		PFLU_RS05160	0.31	+2.0
1,151,551	+		PFLU_RS05160	0.33	-1.5
1,151,551	+		PFLU_RS05160	0.33	-1.1
1,151,551	+		PFLU_RS05160	0.33	+1.0
1,151,551	+		PFLU_RS05160	0.33	+1.3
1,151,551	+		PFLU_RS05160	0.33	+0.6
1,151,551	+		PFLU_RS05160	0.33	-1.6
1,151,551	+		PFLU_RS05160	0.33	+0.4
1,151,551	+		PFLU_RS05160	0.33	-1.5
1,151,551	+		PFLU_RS05160	0.33	-0.0
1,151,551	+		PFLU_RS05160	0.33	-0.7
1,151,551	+		PFLU_RS05160	0.33	-0.9
1,151,551	+		PFLU_RS05160	0.33	+1.0
1,151,552	-		PFLU_RS05160	0.33	+1.5
1,151,552	-		PFLU_RS05160	0.33	-0.1
1,151,552	-		PFLU_RS05160	0.33	+2.2
1,151,552	-		PFLU_RS05160	0.33	+1.4
1,151,552	-		PFLU_RS05160	0.33	+0.6
1,151,552	-		PFLU_RS05160	0.33	-2.0
1,151,552	-		PFLU_RS05160	0.33	-0.3
1,151,552	-		PFLU_RS05160	0.33	+1.2
1,151,563	+		PFLU_RS05160	0.33	-2.1
1,151,563	+		PFLU_RS05160	0.33	+2.3
1,151,563	+		PFLU_RS05160	0.33	-0.6
1,151,563	+		PFLU_RS05160	0.33	+0.8
1,151,563	+		PFLU_RS05160	0.33	+0.7
1,151,563	+		PFLU_RS05160	0.33	+0.3
1,151,563	+		PFLU_RS05160	0.33	-1.9
1,151,563	+		PFLU_RS05160	0.33	-2.3
1,151,563	+		PFLU_RS05160	0.33	-1.6
1,151,563	+		PFLU_RS05160	0.33	+1.6
1,151,563	+		PFLU_RS05160	0.33	+0.6
1,151,563	+		PFLU_RS05160	0.33	+0.6
1,151,564	-		PFLU_RS05160	0.33	+0.2
1,151,564	-		PFLU_RS05160	0.33	-0.9
1,151,564	-		PFLU_RS05160	0.33	+2.4
1,151,564	-		PFLU_RS05160	0.33	-1.0
1,151,564	-		PFLU_RS05160	0.33	+0.5
1,151,564	-		PFLU_RS05160	0.33	+1.5
1,151,564	-		PFLU_RS05160	0.33	+1.2
1,151,564	-		PFLU_RS05160	0.33	+0.3
1,151,564	-		PFLU_RS05160	0.33	-1.3
1,151,564	-		PFLU_RS05160	0.33	-0.4
1,151,564	-		PFLU_RS05160	0.33	-1.0
1,151,564	-		PFLU_RS05160	0.33	+1.3
1,151,567	+		PFLU_RS05160	0.33	-2.0
1,151,567	+		PFLU_RS05160	0.33	-1.6
1,151,567	+		PFLU_RS05160	0.33	-1.4
1,151,567	+		PFLU_RS05160	0.33	-0.6
1,151,567	+		PFLU_RS05160	0.33	+2.0
1,151,567	+		PFLU_RS05160	0.33	+1.2
1,151,567	+		PFLU_RS05160	0.33	+2.8
1,151,568	-		PFLU_RS05160	0.33	+0.2
1,151,568	-		PFLU_RS05160	0.33	-1.1
1,151,568	-		PFLU_RS05160	0.33	-0.6
1,151,568	-		PFLU_RS05160	0.33	-1.9
1,151,568	-		PFLU_RS05160	0.33	+4.4
1,151,568	-		PFLU_RS05160	0.33	+2.5
1,151,568	-		PFLU_RS05160	0.33	+1.4
1,151,568	-		PFLU_RS05160	0.33	-1.2
1,151,612	-		PFLU_RS05160	0.35	-0.4
1,151,646	-		PFLU_RS05160	0.37	-1.0