Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS28735

Experiment: propionate 20 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	propionate 20 mM (C)
6,390,579	-				+2.4
6,390,647	+		PFLU_RS28730	0.13	+2.2
6,390,648	-		PFLU_RS28730	0.13	+0.6
6,390,648	-		PFLU_RS28730	0.13	-0.9
6,390,682	+		PFLU_RS28730	0.16	+2.7
6,390,682	+		PFLU_RS28730	0.16	+0.3
6,390,682	+		PFLU_RS28730	0.16	-0.0
6,390,682	+		PFLU_RS28730	0.16	-0.3
6,390,682	+		PFLU_RS28730	0.16	-0.3
6,390,682	+		PFLU_RS28730	0.16	+2.5
6,390,682	+		PFLU_RS28730	0.16	-0.2
6,390,682	+		PFLU_RS28730	0.16	-1.1
6,390,682	+		PFLU_RS28730	0.16	+0.9
6,390,683	-		PFLU_RS28730	0.17	+1.4
6,390,683	-		PFLU_RS28730	0.17	-0.4
6,390,683	-		PFLU_RS28730	0.17	+0.4
6,390,683	-		PFLU_RS28730	0.17	-0.2
6,390,683	-		PFLU_RS28730	0.17	-1.6
6,390,683	-		PFLU_RS28730	0.17	-1.2
6,390,715	+		PFLU_RS28730	0.20	+0.4
6,390,716	-		PFLU_RS28730	0.20	-0.2
6,390,739	+		PFLU_RS28730	0.23	+1.4
6,390,739	+		PFLU_RS28730	0.23	+0.7
6,390,740	-		PFLU_RS28730	0.23	-0.7
6,390,740	-		PFLU_RS28730	0.23	-0.6
6,390,740	-		PFLU_RS28730	0.23	+0.8
6,390,779	-		PFLU_RS28730	0.27	+3.2
6,390,891	+		PFLU_RS28730	0.39	-0.2
6,390,891	+		PFLU_RS28730	0.39	+1.1
6,390,891	+		PFLU_RS28730	0.39	-2.0
6,390,891	+		PFLU_RS28730	0.39	-0.9
6,390,891	+		PFLU_RS28730	0.39	-0.2
6,390,891	+		PFLU_RS28730	0.39	-1.1
6,390,892	-		PFLU_RS28730	0.39	-0.6
6,390,892	-		PFLU_RS28730	0.39	+1.9
6,390,892	-		PFLU_RS28730	0.39	+1.1
6,390,892	-		PFLU_RS28730	0.39	-1.6
6,390,892	-		PFLU_RS28730	0.39	-1.1
6,390,892	-		PFLU_RS28730	0.39	+0.5
6,390,892	-		PFLU_RS28730	0.39	-0.1
6,390,892	-		PFLU_RS28730	0.39	+0.3
6,390,892	-		PFLU_RS28730	0.39	-0.7
6,390,892	-		PFLU_RS28730	0.39	+0.9
6,390,894	+		PFLU_RS28730	0.39	+1.8
6,390,894	+		PFLU_RS28730	0.39	+4.1
6,390,894	+		PFLU_RS28730	0.39	-1.6
6,390,894	+		PFLU_RS28730	0.39	+3.0
6,390,894	+		PFLU_RS28730	0.39	-1.6
6,390,894	+		PFLU_RS28730	0.39	+0.5
6,390,894	+		PFLU_RS28730	0.39	-0.2
6,390,894	+		PFLU_RS28730	0.39	+0.0
6,390,894	+		PFLU_RS28730	0.39	+4.1
6,390,894	+		PFLU_RS28730	0.39	+0.4
6,390,894	+		PFLU_RS28730	0.39	+1.7
6,390,894	+		PFLU_RS28730	0.39	+0.1
6,390,894	+		PFLU_RS28730	0.39	+0.4
6,390,894	+		PFLU_RS28730	0.39	-2.4
6,390,894	+		PFLU_RS28730	0.39	+1.2
6,390,895	-		PFLU_RS28730	0.39	-0.2
6,390,895	-		PFLU_RS28730	0.39	+0.1
6,390,895	-		PFLU_RS28730	0.39	+1.6
6,390,895	-		PFLU_RS28730	0.39	+2.8
6,390,895	-		PFLU_RS28730	0.39	-1.1
6,390,895	-		PFLU_RS28730	0.39	-1.5
6,390,895	-		PFLU_RS28730	0.39	-2.3
6,390,895	-		PFLU_RS28730	0.39	+1.1
6,390,895	-		PFLU_RS28730	0.39	+2.1
6,390,895	-		PFLU_RS28730	0.39	-0.2
6,390,895	-		PFLU_RS28730	0.39	+0.1
6,390,895	-		PFLU_RS28730	0.39	+2.6
6,390,895	-		PFLU_RS28730	0.39	+1.8
6,390,895	-		PFLU_RS28730	0.39	+2.4
6,390,895	-		PFLU_RS28730	0.39	+2.6
6,391,098	+		PFLU_RS28730	0.61	+1.6
6,391,098	+		PFLU_RS28730	0.61	+0.2
6,391,098	+		PFLU_RS28730	0.61	-0.5
6,391,098	+		PFLU_RS28730	0.61	+2.9
6,391,098	+		PFLU_RS28730	0.61	-2.4
6,391,098	+		PFLU_RS28730	0.61	-1.7
6,391,098	+		PFLU_RS28730	0.61	-0.7
6,391,098	+		PFLU_RS28730	0.61	-1.2
6,391,098	+		PFLU_RS28730	0.61	+0.8
6,391,098	+		PFLU_RS28730	0.61	+2.3
6,391,098	+		PFLU_RS28730	0.61	+0.5
6,391,098	+		PFLU_RS28730	0.61	-0.3
6,391,099	-		PFLU_RS28730	0.61	-1.5
6,391,099	-		PFLU_RS28730	0.61	-0.4
6,391,099	-		PFLU_RS28730	0.61	-2.0
6,391,099	-		PFLU_RS28730	0.61	-1.0
6,391,099	-		PFLU_RS28730	0.61	-1.1
6,391,099	-		PFLU_RS28730	0.61	+2.1
6,391,099	-		PFLU_RS28730	0.61	+0.3
6,391,099	-		PFLU_RS28730	0.61	+1.0
6,391,099	-		PFLU_RS28730	0.61	+0.3
6,391,099	-		PFLU_RS28730	0.61	+1.7
6,391,099	-		PFLU_RS28730	0.61	+4.5
6,391,212	+		PFLU_RS28730	0.73	-2.2
6,391,212	+		PFLU_RS28730	0.73	-0.7
6,391,212	+		PFLU_RS28730	0.73	-2.6
6,391,212	+		PFLU_RS28730	0.73	-0.2
6,391,212	+		PFLU_RS28730	0.73	-0.2
6,391,212	+		PFLU_RS28730	0.73	+0.2
6,391,212	+		PFLU_RS28730	0.73	-0.9
6,391,212	+		PFLU_RS28730	0.73	+1.3
6,391,213	-		PFLU_RS28730	0.73	-0.5
6,391,213	-		PFLU_RS28730	0.73	-0.5
6,391,213	-		PFLU_RS28730	0.73	+0.7
6,391,222	+		PFLU_RS28730	0.74	+0.1
6,391,223	-		PFLU_RS28730	0.74	-1.6
6,391,223	-		PFLU_RS28730	0.74	-2.1
6,391,230	+		PFLU_RS28730	0.75	-1.2
6,391,230	+		PFLU_RS28730	0.75	-1.9
6,391,230	+		PFLU_RS28730	0.75	-0.9
6,391,231	-		PFLU_RS28730	0.75	+0.1
6,391,231	-		PFLU_RS28730	0.75	-1.2
6,391,231	-		PFLU_RS28730	0.75	+0.8
6,391,369	-		PFLU_RS28730	0.89	+1.6
6,391,380	+				+0.5
6,391,380	+				+1.3
6,391,380	+				+0.9
6,391,380	+				+1.2
6,391,380	+				+0.2
6,391,380	+				+0.9
6,391,381	-				-0.0
6,391,381	-				+0.9
6,391,381	-				-0.8
6,391,381	-				+1.6
6,391,381	-				+1.4
6,391,381	-				-0.7
6,391,468	+				+1.1
6,391,469	-				+3.4
6,391,469	-				-1.2
6,391,543	-				-1.9
6,391,543	-				-0.4
6,391,559	+				+0.2
6,391,559	+				+0.5
6,391,559	+				+1.6
6,391,559	+				+0.5
6,391,559	+				-1.0
6,391,559	+				+2.1
6,391,560	-				+0.4
6,391,560	-				-0.5
6,391,560	-				-1.1
6,391,560	-				+1.7
6,391,560	-				-0.9
6,391,560	-				+1.2
6,391,560	-				-0.7
6,391,560	-				-3.0
6,391,560	-				-2.4
6,391,560	-				+3.1
6,391,560	-				-1.4
6,391,560	-				-0.8
6,391,643	+		PFLU_RS28735	0.13	-1.0
6,391,644	-		PFLU_RS28735	0.13	-2.1
6,391,644	-		PFLU_RS28735	0.13	-0.1
6,391,665	-		PFLU_RS28735	0.17	-1.4
6,391,829	+		PFLU_RS28735	0.45	+0.7
6,391,830	-		PFLU_RS28735	0.45	+0.8
6,391,830	-		PFLU_RS28735	0.45	-0.4
6,391,853	+		PFLU_RS28735	0.49	+1.9
6,391,853	+		PFLU_RS28735	0.49	+2.1
6,391,853	+		PFLU_RS28735	0.49	+0.5
6,391,853	+		PFLU_RS28735	0.49	+0.2
6,391,853	+		PFLU_RS28735	0.49	-1.9
6,391,853	+		PFLU_RS28735	0.49	-2.1
6,391,854	-		PFLU_RS28735	0.50	+0.5
6,391,854	-		PFLU_RS28735	0.50	-0.7
6,391,854	-		PFLU_RS28735	0.50	+1.1
6,391,944	+		PFLU_RS28735	0.65	+0.5
6,391,945	-		PFLU_RS28735	0.65	+0.6
6,391,945	-		PFLU_RS28735	0.65	+2.3
6,391,994	+		PFLU_RS28735	0.74	+0.4
6,391,995	-		PFLU_RS28735	0.74	-0.9
6,392,007	-		PFLU_RS28735	0.76	+1.0
6,392,007	-		PFLU_RS28735	0.76	-0.6
6,392,117	+				-1.2
6,392,117	+				-0.2
6,392,117	+				-2.1
6,392,117	+				+2.1
6,392,118	-				+2.7
6,392,118	-				+2.0
6,392,118	-				+1.8
6,392,118	-				+0.9
6,392,141	+				+1.8
6,392,141	+				+0.8
6,392,141	+				-2.2
6,392,142	-				-1.4
6,392,163	-				-0.2
6,392,208	+				+2.3
6,392,208	+				+2.0
6,392,208	+				-3.0
6,392,208	+				-2.5
6,392,208	+				-1.7
6,392,208	+				-0.8
6,392,208	+				+1.1
6,392,208	+				+1.4
6,392,208	+				-1.3
6,392,209	-				+1.1
6,392,209	-				+1.2
6,392,209	-				-1.3
6,392,209	-				-1.1
6,392,209	-				+1.0
6,392,209	-				-1.2
6,392,209	-				+1.1
6,392,237	+				-1.2
6,392,237	+				+2.5
6,392,238	-				+0.5
6,392,238	-				+0.9
6,392,238	-				-1.1
6,392,238	-				+0.2
6,392,238	-				+0.8
6,392,243	+				-1.4
6,392,243	+				+1.8
6,392,243	+				+0.6
6,392,244	-				+1.7
6,392,244	-				-0.5
6,392,335	+				-1.0
6,392,378	+				-2.0
6,392,378	+				+1.3
6,392,378	+				-1.4
6,392,378	+				+0.3
6,392,378	+				-1.0
6,392,378	+				-0.2
6,392,378	+				+3.4
6,392,378	+				-0.9
6,392,378	+				-0.2
6,392,378	+				+3.3
6,392,378	+				+1.0
6,392,379	-				+3.0
6,392,379	-				-0.5
6,392,379	-				-0.1
6,392,379	-				-2.0
6,392,522	+		PFLU_RS28740	0.15	-1.4
6,392,522	+		PFLU_RS28740	0.15	-0.5
6,392,522	+		PFLU_RS28740	0.15	+2.1
6,392,522	+		PFLU_RS28740	0.15	-0.7
6,392,522	+		PFLU_RS28740	0.15	-1.6
6,392,522	+		PFLU_RS28740	0.15	-1.7
6,392,522	+		PFLU_RS28740	0.15	-0.7
6,392,522	+		PFLU_RS28740	0.15	+3.3
6,392,522	+		PFLU_RS28740	0.15	+0.9
6,392,522	+		PFLU_RS28740	0.15	-2.4
6,392,522	+		PFLU_RS28740	0.15	+2.5
6,392,522	+		PFLU_RS28740	0.15	-1.1
6,392,522	+		PFLU_RS28740	0.15	+2.2
6,392,522	+		PFLU_RS28740	0.15	-1.1
6,392,522	+		PFLU_RS28740	0.15	+1.0
6,392,522	+		PFLU_RS28740	0.15	-2.5
6,392,522	+		PFLU_RS28740	0.15	-1.8
6,392,522	+		PFLU_RS28740	0.15	+1.6
6,392,522	+		PFLU_RS28740	0.15	-0.2
6,392,522	+		PFLU_RS28740	0.15	-2.2
6,392,522	+		PFLU_RS28740	0.15	+1.5
6,392,522	+		PFLU_RS28740	0.15	+2.5
6,392,522	+		PFLU_RS28740	0.15	+1.4
6,392,522	+		PFLU_RS28740	0.15	+1.3
6,392,522	+		PFLU_RS28740	0.15	-2.3
6,392,522	+		PFLU_RS28740	0.15	+0.2
6,392,522	+		PFLU_RS28740	0.15	-0.2
6,392,522	+		PFLU_RS28740	0.15	-1.9
6,392,522	+		PFLU_RS28740	0.15	+1.0
6,392,522	+		PFLU_RS28740	0.15	-0.3
6,392,522	+		PFLU_RS28740	0.15	-1.2
6,392,522	+		PFLU_RS28740	0.15	-0.0
6,392,522	+		PFLU_RS28740	0.15	+2.5
6,392,522	+		PFLU_RS28740	0.15	+0.8
6,392,522	+		PFLU_RS28740	0.15	+2.3
6,392,522	+		PFLU_RS28740	0.15	-0.5
6,392,522	+		PFLU_RS28740	0.15	-0.4
6,392,522	+		PFLU_RS28740	0.15	-0.2
6,392,523	-		PFLU_RS28740	0.15	+1.1
6,392,523	-		PFLU_RS28740	0.15	+3.2
6,392,523	-		PFLU_RS28740	0.15	-0.1
6,392,523	-		PFLU_RS28740	0.15	+0.1
6,392,523	-		PFLU_RS28740	0.15	+0.2
6,392,523	-		PFLU_RS28740	0.15	+2.7
6,392,523	-		PFLU_RS28740	0.15	+0.3
6,392,523	-		PFLU_RS28740	0.15	-2.3
6,392,523	-		PFLU_RS28740	0.15	-1.1
6,392,523	-		PFLU_RS28740	0.15	-1.4
6,392,523	-		PFLU_RS28740	0.15	+3.4
6,392,523	-		PFLU_RS28740	0.15	-0.9
6,392,523	-		PFLU_RS28740	0.15	+0.0
6,392,523	-		PFLU_RS28740	0.15	-1.1
6,392,523	-		PFLU_RS28740	0.15	-1.1
6,392,523	-		PFLU_RS28740	0.15	-1.2
6,392,523	-		PFLU_RS28740	0.15	-0.3
6,392,523	-		PFLU_RS28740	0.15	+1.1
6,392,523	-		PFLU_RS28740	0.15	-0.1
6,392,523	-		PFLU_RS28740	0.15	-0.5
6,392,523	-		PFLU_RS28740	0.15	-0.5
6,392,523	-		PFLU_RS28740	0.15	-1.2
6,392,523	-		PFLU_RS28740	0.15	-1.2
6,392,523	-		PFLU_RS28740	0.15	+1.1
6,392,523	-		PFLU_RS28740	0.15	-1.2
6,392,523	-		PFLU_RS28740	0.15	+0.4
6,392,523	-		PFLU_RS28740	0.15	-1.2
6,392,523	-		PFLU_RS28740	0.15	-0.5
6,392,523	-		PFLU_RS28740	0.15	+1.7
6,392,523	-		PFLU_RS28740	0.15	-0.2
6,392,523	-		PFLU_RS28740	0.15	+0.5
6,392,523	-		PFLU_RS28740	0.15	+1.5
6,392,523	-		PFLU_RS28740	0.15	-0.4
6,392,523	-		PFLU_RS28740	0.15	-0.1
6,392,523	-		PFLU_RS28740	0.15	-0.8
6,392,523	-		PFLU_RS28740	0.15	+2.5
6,392,573	+		PFLU_RS28740	0.17	-0.1
6,392,574	-		PFLU_RS28740	0.17	+1.3
6,392,587	+		PFLU_RS28740	0.18	+3.0
6,392,588	-		PFLU_RS28740	0.18	-1.9
6,392,594	+		PFLU_RS28740	0.18	-0.5
6,392,594	+		PFLU_RS28740	0.18	+0.3
6,392,595	-		PFLU_RS28740	0.18	+0.4
6,392,687	+		PFLU_RS28740	0.22	-1.0
6,392,687	+		PFLU_RS28740	0.22	+3.7
6,392,687	+		PFLU_RS28740	0.22	-2.0
6,392,687	+		PFLU_RS28740	0.22	+1.8
6,392,687	+		PFLU_RS28740	0.22	+0.1
6,392,687	+		PFLU_RS28740	0.22	-0.4
6,392,688	-		PFLU_RS28740	0.22	-1.6
6,392,688	-		PFLU_RS28740	0.22	-1.1
6,392,688	-		PFLU_RS28740	0.22	+2.5
6,392,688	-		PFLU_RS28740	0.22	+1.5
6,392,688	-		PFLU_RS28740	0.22	-2.2
6,392,688	-		PFLU_RS28740	0.22	-0.5
6,392,688	-		PFLU_RS28740	0.22	+0.5
6,392,688	-		PFLU_RS28740	0.22	-1.1
6,392,688	-		PFLU_RS28740	0.22	+1.1
6,392,689	+		PFLU_RS28740	0.22	-1.5
6,392,689	+		PFLU_RS28740	0.22	-0.2
6,392,689	+		PFLU_RS28740	0.22	+0.6
6,392,689	+		PFLU_RS28740	0.22	-0.1
6,392,689	+		PFLU_RS28740	0.22	-2.3
6,392,689	+		PFLU_RS28740	0.22	+2.2
6,392,689	+		PFLU_RS28740	0.22	-0.2
6,392,690	-		PFLU_RS28740	0.22	-0.8
6,392,690	-		PFLU_RS28740	0.22	-1.5
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