Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS27560

Experiment: propionate 20 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	propionate 20 mM (C)
6,131,602	+		PFLU_RS27555	0.50	-0.6
6,131,602	+		PFLU_RS27555	0.50	+2.4
6,131,603	-		PFLU_RS27555	0.50	-0.8
6,131,603	-		PFLU_RS27555	0.50	-2.8
6,131,603	-		PFLU_RS27555	0.50	+0.8
6,131,727	+		PFLU_RS27555	0.57	-3.2
6,131,727	+		PFLU_RS27555	0.57	-1.1
6,131,727	+		PFLU_RS27555	0.57	-2.7
6,131,727	+		PFLU_RS27555	0.57	-0.0
6,131,727	+		PFLU_RS27555	0.57	+0.7
6,131,727	+		PFLU_RS27555	0.57	-0.4
6,131,728	-		PFLU_RS27555	0.57	+0.4
6,131,728	-		PFLU_RS27555	0.57	-0.8
6,131,728	-		PFLU_RS27555	0.57	+1.6
6,131,745	+		PFLU_RS27555	0.58	-1.5
6,131,745	+		PFLU_RS27555	0.58	+2.1
6,131,746	-		PFLU_RS27555	0.58	-1.2
6,131,746	-		PFLU_RS27555	0.58	+1.0
6,131,746	-		PFLU_RS27555	0.58	+1.4
6,131,853	+		PFLU_RS27555	0.64	-0.7
6,131,853	+		PFLU_RS27555	0.64	-0.2
6,131,853	+		PFLU_RS27555	0.64	+0.9
6,131,853	+		PFLU_RS27555	0.64	+1.4
6,131,853	+		PFLU_RS27555	0.64	-1.7
6,131,853	+		PFLU_RS27555	0.64	-1.1
6,131,853	+		PFLU_RS27555	0.64	+0.3
6,131,853	+		PFLU_RS27555	0.64	-1.8
6,131,853	+		PFLU_RS27555	0.64	-0.3
6,131,853	+		PFLU_RS27555	0.64	+0.4
6,131,853	+		PFLU_RS27555	0.64	+0.5
6,131,854	-		PFLU_RS27555	0.64	-1.9
6,131,854	-		PFLU_RS27555	0.64	-0.7
6,131,854	-		PFLU_RS27555	0.64	-0.0
6,131,854	-		PFLU_RS27555	0.64	-0.2
6,131,854	-		PFLU_RS27555	0.64	-1.2
6,131,854	-		PFLU_RS27555	0.64	-1.2
6,131,854	-		PFLU_RS27555	0.64	-0.3
6,131,973	+		PFLU_RS27555	0.71	+0.6
6,131,973	+		PFLU_RS27555	0.71	-0.9
6,131,973	+		PFLU_RS27555	0.71	-0.7
6,131,973	+		PFLU_RS27555	0.71	-1.3
6,131,973	+		PFLU_RS27555	0.71	+0.7
6,131,973	+		PFLU_RS27555	0.71	-0.7
6,131,973	+		PFLU_RS27555	0.71	-1.3
6,131,973	+		PFLU_RS27555	0.71	+0.9
6,131,973	+		PFLU_RS27555	0.71	-0.8
6,131,973	+		PFLU_RS27555	0.71	-0.6
6,131,973	+		PFLU_RS27555	0.71	-2.0
6,131,973	+		PFLU_RS27555	0.71	-1.7
6,131,973	+		PFLU_RS27555	0.71	-0.7
6,131,973	+		PFLU_RS27555	0.71	-1.6
6,131,974	-		PFLU_RS27555	0.72	+0.1
6,131,974	-		PFLU_RS27555	0.72	-0.0
6,131,974	-		PFLU_RS27555	0.72	+1.4
6,131,974	-		PFLU_RS27555	0.72	-2.3
6,131,974	-		PFLU_RS27555	0.72	-0.3
6,131,974	-		PFLU_RS27555	0.72	-1.9
6,131,974	-		PFLU_RS27555	0.72	-3.1
6,131,974	-		PFLU_RS27555	0.72	+0.6
6,131,974	-		PFLU_RS27555	0.72	+4.5
6,131,974	-		PFLU_RS27555	0.72	-2.6
6,131,974	-		PFLU_RS27555	0.72	+0.7
6,131,974	-		PFLU_RS27555	0.72	-0.3
6,131,974	-		PFLU_RS27555	0.72	-0.3
6,131,974	-		PFLU_RS27555	0.72	+1.8
6,131,974	-		PFLU_RS27555	0.72	-1.6
6,131,974	-		PFLU_RS27555	0.72	+1.0
6,131,974	-		PFLU_RS27555	0.72	-2.4
6,132,021	+		PFLU_RS27555	0.74	-0.6
6,132,021	+		PFLU_RS27555	0.74	-2.0
6,132,022	-		PFLU_RS27555	0.74	-1.5
6,132,022	-		PFLU_RS27555	0.74	+0.5
6,132,022	-		PFLU_RS27555	0.74	+1.9
6,132,022	-		PFLU_RS27555	0.74	+1.0
6,132,022	-		PFLU_RS27555	0.74	-0.1
6,132,022	-		PFLU_RS27555	0.74	-0.0
6,132,022	-		PFLU_RS27555	0.74	-1.8
6,132,022	-		PFLU_RS27555	0.74	-1.2
6,132,022	-		PFLU_RS27555	0.74	+0.8
6,132,108	+		PFLU_RS27555	0.79	-0.8
6,132,109	-		PFLU_RS27555	0.79	+0.3
6,132,217	-		PFLU_RS27555	0.86	+2.2
6,132,222	+		PFLU_RS27555	0.86	+1.2
6,132,222	+		PFLU_RS27555	0.86	+1.7
6,132,222	+		PFLU_RS27555	0.86	+0.4
6,132,223	-		PFLU_RS27555	0.86	+1.8
6,132,237	+		PFLU_RS27555	0.87	-2.0
6,132,237	+		PFLU_RS27555	0.87	-0.3
6,132,237	+		PFLU_RS27555	0.87	+1.1
6,132,237	+		PFLU_RS27555	0.87	+2.1
6,132,237	+		PFLU_RS27555	0.87	-0.6
6,132,237	+		PFLU_RS27555	0.87	-1.0
6,132,237	+		PFLU_RS27555	0.87	-2.2
6,132,237	+		PFLU_RS27555	0.87	-1.7
6,132,237	+		PFLU_RS27555	0.87	-1.7
6,132,237	+		PFLU_RS27555	0.87	-0.8
6,132,237	+		PFLU_RS27555	0.87	-1.0
6,132,237	+		PFLU_RS27555	0.87	+0.9
6,132,237	+		PFLU_RS27555	0.87	-1.7
6,132,237	+		PFLU_RS27555	0.87	-0.3
6,132,237	+		PFLU_RS27555	0.87	-2.2
6,132,237	+		PFLU_RS27555	0.87	-0.8
6,132,237	+		PFLU_RS27555	0.87	-1.3
6,132,237	+		PFLU_RS27555	0.87	-1.1
6,132,237	+		PFLU_RS27555	0.87	-1.1
6,132,237	+		PFLU_RS27555	0.87	+0.9
6,132,237	+		PFLU_RS27555	0.87	-0.0
6,132,237	+		PFLU_RS27555	0.87	-1.0
6,132,237	+		PFLU_RS27555	0.87	+3.3
6,132,237	+		PFLU_RS27555	0.87	-1.0
6,132,237	+		PFLU_RS27555	0.87	-1.1
6,132,237	+		PFLU_RS27555	0.87	-1.1
6,132,238	-		PFLU_RS27555	0.87	-0.6
6,132,238	-		PFLU_RS27555	0.87	-0.1
6,132,238	-		PFLU_RS27555	0.87	+1.0
6,132,238	-		PFLU_RS27555	0.87	-1.3
6,132,238	-		PFLU_RS27555	0.87	-0.5
6,132,238	-		PFLU_RS27555	0.87	-1.3
6,132,238	-		PFLU_RS27555	0.87	-3.1
6,132,238	-		PFLU_RS27555	0.87	+0.8
6,132,238	-		PFLU_RS27555	0.87	-0.3
6,132,238	-		PFLU_RS27555	0.87	-1.5
6,132,238	-		PFLU_RS27555	0.87	+0.4
6,132,238	-		PFLU_RS27555	0.87	-1.6
6,132,238	-		PFLU_RS27555	0.87	-1.5
6,132,238	-		PFLU_RS27555	0.87	+0.8
6,132,238	-		PFLU_RS27555	0.87	-2.6
6,132,238	-		PFLU_RS27555	0.87	-2.0
6,132,238	-		PFLU_RS27555	0.87	-1.5
6,132,238	-		PFLU_RS27555	0.87	+1.6
6,132,238	-		PFLU_RS27555	0.87	-0.6
6,132,238	-		PFLU_RS27555	0.87	+3.3
6,132,238	-		PFLU_RS27555	0.87	-1.5
6,132,238	-		PFLU_RS27555	0.87	-0.6
6,132,238	-		PFLU_RS27555	0.87	-1.3
6,132,238	-		PFLU_RS27555	0.87	-0.2
6,132,238	-		PFLU_RS27555	0.87	-0.0
6,132,421	+				-2.3
6,132,421	+				+0.4
6,132,421	+				-0.6
6,132,421	+				-2.8
6,132,421	+				-1.2
6,132,421	+				-0.3
6,132,421	+				-1.0
6,132,421	+				-1.5
6,132,421	+				-1.7
6,132,422	-				+0.4
6,132,422	-				-0.0
6,132,422	-				-2.2
6,132,422	-				+1.6
6,132,422	-				+3.6
6,132,422	-				-2.5
6,132,422	-				-2.1
6,132,422	-				+0.4
6,132,422	-				-0.7
6,132,422	-				+0.6
6,132,422	-				-2.1
6,132,422	-				+1.1
6,132,422	-				-0.8
6,132,422	-				-0.8
6,132,422	-				-1.0
6,132,422	-				+0.8
6,132,422	-				-1.7
6,132,456	+				+0.5
6,132,484	+				-2.0
6,132,485	-				+4.5
6,132,485	-				-1.3
6,132,601	+		PFLU_RS27560	0.17	+1.5
6,132,602	-		PFLU_RS27560	0.17	-2.7
6,132,602	-		PFLU_RS27560	0.17	+0.2
6,132,602	-		PFLU_RS27560	0.17	-2.0
6,132,602	-		PFLU_RS27560	0.17	-1.1
6,132,707	-		PFLU_RS27560	0.30	+3.8
6,132,707	-		PFLU_RS27560	0.30	+0.2
6,132,742	+		PFLU_RS27560	0.34	-0.0
6,132,742	+		PFLU_RS27560	0.34	+1.4
6,132,742	+		PFLU_RS27560	0.34	+2.2
6,132,742	+		PFLU_RS27560	0.34	+2.4
6,132,742	+		PFLU_RS27560	0.34	-1.5
6,132,743	-		PFLU_RS27560	0.34	-2.6
6,132,743	-		PFLU_RS27560	0.34	-1.2
6,132,743	-		PFLU_RS27560	0.34	+0.3
6,132,790	+		PFLU_RS27560	0.40	-1.3
6,132,790	+		PFLU_RS27560	0.40	+1.1
6,132,790	+		PFLU_RS27560	0.40	+0.7
6,132,790	+		PFLU_RS27560	0.40	-2.1
6,132,790	+		PFLU_RS27560	0.40	-0.6
6,132,791	-		PFLU_RS27560	0.41	-2.0
6,132,791	-		PFLU_RS27560	0.41	+2.4
6,132,791	-		PFLU_RS27560	0.41	-0.6
6,132,791	-		PFLU_RS27560	0.41	+0.7
6,132,791	-		PFLU_RS27560	0.41	-0.3
6,132,795	+		PFLU_RS27560	0.41	-0.3
6,132,795	+		PFLU_RS27560	0.41	+0.5
6,132,796	-		PFLU_RS27560	0.41	-1.5
6,132,796	-		PFLU_RS27560	0.41	+2.8
6,132,796	-		PFLU_RS27560	0.41	+1.1
6,132,796	-		PFLU_RS27560	0.41	+1.4
6,132,796	-		PFLU_RS27560	0.41	+1.0
6,132,901	+		PFLU_RS27560	0.54	-1.7
6,132,901	+		PFLU_RS27560	0.54	-0.9
6,132,901	+		PFLU_RS27560	0.54	-1.7
6,132,901	+		PFLU_RS27560	0.54	+0.6
6,132,901	+		PFLU_RS27560	0.54	-2.8
6,132,901	+		PFLU_RS27560	0.54	-0.8
6,132,902	-		PFLU_RS27560	0.54	-0.6
6,132,902	-		PFLU_RS27560	0.54	+1.7
6,132,902	-		PFLU_RS27560	0.54	-2.3
6,132,902	-		PFLU_RS27560	0.54	-0.1
6,132,902	-		PFLU_RS27560	0.54	+2.5
6,132,978	+		PFLU_RS27560	0.64	+0.8
6,132,978	+		PFLU_RS27560	0.64	+3.6
6,133,042	+		PFLU_RS27560	0.72	-1.3
6,133,042	+		PFLU_RS27560	0.72	-2.3
6,133,042	+		PFLU_RS27560	0.72	+1.6
6,133,042	+		PFLU_RS27560	0.72	+0.6
6,133,042	+		PFLU_RS27560	0.72	+0.7
6,133,042	+		PFLU_RS27560	0.72	+1.0
6,133,042	+		PFLU_RS27560	0.72	-1.5
6,133,042	+		PFLU_RS27560	0.72	+0.8
6,133,042	+		PFLU_RS27560	0.72	-2.4
6,133,042	+		PFLU_RS27560	0.72	-0.6
6,133,042	+		PFLU_RS27560	0.72	+1.3
6,133,042	+		PFLU_RS27560	0.72	-2.3
6,133,042	+		PFLU_RS27560	0.72	+1.8
6,133,042	+		PFLU_RS27560	0.72	+1.0
6,133,042	+		PFLU_RS27560	0.72	-2.0
6,133,042	+		PFLU_RS27560	0.72	+1.0
6,133,042	+		PFLU_RS27560	0.72	-0.2
6,133,042	+		PFLU_RS27560	0.72	+4.5
6,133,043	-		PFLU_RS27560	0.72	+0.6
6,133,043	-		PFLU_RS27560	0.72	+2.0
6,133,043	-		PFLU_RS27560	0.72	-1.3
6,133,043	-		PFLU_RS27560	0.72	-2.3
6,133,043	-		PFLU_RS27560	0.72	+0.4
6,133,043	-		PFLU_RS27560	0.72	+0.2
6,133,043	-		PFLU_RS27560	0.72	-1.5
6,133,043	-		PFLU_RS27560	0.72	-2.8
6,133,043	-		PFLU_RS27560	0.72	-0.7
6,133,043	-		PFLU_RS27560	0.72	-0.6
6,133,043	-		PFLU_RS27560	0.72	+1.2
6,133,043	-		PFLU_RS27560	0.72	-0.6
6,133,043	-		PFLU_RS27560	0.72	-0.3
6,133,043	-		PFLU_RS27560	0.72	+0.2
6,133,043	-		PFLU_RS27560	0.72	-0.8
6,133,043	-		PFLU_RS27560	0.72	-1.5
6,133,051	+		PFLU_RS27560	0.73	+1.8
6,133,051	+		PFLU_RS27560	0.73	-2.0
6,133,052	-		PFLU_RS27560	0.73	-2.7
6,133,060	+		PFLU_RS27560	0.74	+0.3
6,133,060	+		PFLU_RS27560	0.74	-0.2
6,133,060	+		PFLU_RS27560	0.74	-2.0
6,133,060	+		PFLU_RS27560	0.74	+0.4
6,133,060	+		PFLU_RS27560	0.74	+0.6
6,133,060	+		PFLU_RS27560	0.74	-0.6
6,133,060	+		PFLU_RS27560	0.74	+2.2
6,133,060	+		PFLU_RS27560	0.74	+0.7
6,133,060	+		PFLU_RS27560	0.74	+0.7
6,133,061	-		PFLU_RS27560	0.74	-1.5
6,133,061	-		PFLU_RS27560	0.74	-1.9
6,133,061	-		PFLU_RS27560	0.74	-0.7
6,133,061	-		PFLU_RS27560	0.74	-1.3
6,133,061	-		PFLU_RS27560	0.74	-1.0
6,133,061	-		PFLU_RS27560	0.74	-0.0
6,133,061	-		PFLU_RS27560	0.74	-0.4
6,133,061	-		PFLU_RS27560	0.74	+1.0
6,133,061	-		PFLU_RS27560	0.74	-1.0
6,133,061	-		PFLU_RS27560	0.74	+0.3
6,133,061	-		PFLU_RS27560	0.74	+0.6
6,133,061	-		PFLU_RS27560	0.74	+0.4
6,133,061	-		PFLU_RS27560	0.74	+1.3
6,133,061	-		PFLU_RS27560	0.74	-1.1
6,133,061	-		PFLU_RS27560	0.74	-1.4
6,133,087	+		PFLU_RS27560	0.78	+0.4
6,133,087	+		PFLU_RS27560	0.78	-1.0
6,133,087	+		PFLU_RS27560	0.78	+0.4
6,133,088	-		PFLU_RS27560	0.78	-0.6
6,133,088	-		PFLU_RS27560	0.78	-2.1
6,133,213	+				+1.3
6,133,213	+				+1.9
6,133,214	-				-1.0
6,133,238	+				-0.1
6,133,238	+				+0.9
6,133,238	+				+1.6
6,133,238	+				-1.7
6,133,239	-				-1.0
6,133,239	-				-1.1
6,133,240	+				-2.0
6,133,240	+				+0.8
6,133,240	+				-0.2
6,133,240	+				-2.8
6,133,240	+				-0.3
6,133,240	+				-1.0
6,133,240	+				-1.6
6,133,240	+				+1.3
6,133,240	+				+1.0
6,133,240	+				+2.0
6,133,240	+				-0.7
6,133,240	+				-0.8
6,133,240	+				-0.8
6,133,240	+				-1.1
6,133,240	+				+2.1
6,133,241	-				+1.7
6,133,241	-				+1.5
6,133,241	-				-1.5
6,133,241	-				+1.5
6,133,241	-				-1.0
6,133,241	-				+1.0
6,133,241	-				+1.0
6,133,241	-				-0.4
6,133,241	-				+2.0
6,133,241	-				+1.4
6,133,241	-				+1.3
6,133,241	-				+0.4
6,133,241	-				+2.0
6,133,241	-				+1.7
6,133,241	-				-2.8
6,133,241	-				-1.3
6,133,241	-				+0.8
6,133,290	-				-0.8
6,133,290	-				+2.3
6,133,305	+				+0.2
6,133,305	+				-0.3
6,133,305	+				-1.0
6,133,305	+				-1.5
6,133,305	+				+2.1
6,133,305	+				-1.5
6,133,306	-				-1.0
6,133,306	-				-0.8
6,133,306	-				+1.5
6,133,306	-				-1.5
6,133,306	-				+2.1
6,133,306	-				-2.1
6,133,545	+				+0.4
6,133,545	+				-1.3
6,133,545	+				-1.1
6,133,545	+				+1.6
6,133,545	+				+0.3
6,133,545	+				+0.9
6,133,545	+				+0.3
6,133,546	-				+1.4
6,133,546	-				-1.0
6,133,546	-				-0.8
6,133,546	-				+0.3
6,133,890	+		PFLU_RS27565	0.24	-2.3
6,133,890	+		PFLU_RS27565	0.24	+0.3
6,133,890	+		PFLU_RS27565	0.24	+2.0
6,133,891	-		PFLU_RS27565	0.24	-2.2
6,133,891	-		PFLU_RS27565	0.24	-1.2
6,133,891	-		PFLU_RS27565	0.24	+1.5
6,133,891	-		PFLU_RS27565	0.24	+0.1
6,134,043	+		PFLU_RS27565	0.31	+0.4
6,134,043	+		PFLU_RS27565	0.31	+0.1
6,134,044	-		PFLU_RS27565	0.31	-0.3
6,134,068	+		PFLU_RS27565	0.32	+3.1
6,134,068	+		PFLU_RS27565	0.32	-0.5
6,134,068	+		PFLU_RS27565	0.32	+1.1
6,134,068	+		PFLU_RS27565	0.32	+1.0
6,134,068	+		PFLU_RS27565	0.32	-1.0
6,134,068	+		PFLU_RS27565	0.32	+1.3
6,134,068	+		PFLU_RS27565	0.32	+2.9
6,134,068	+		PFLU_RS27565	0.32	+1.8
6,134,068	+		PFLU_RS27565	0.32	-2.2
6,134,068	+		PFLU_RS27565	0.32	-1.1
6,134,068	+		PFLU_RS27565	0.32	+0.0
6,134,068	+		PFLU_RS27565	0.32	-0.0
6,134,068	+		PFLU_RS27565	0.32	+0.4
6,134,069	-		PFLU_RS27565	0.32	-1.3
6,134,069	-		PFLU_RS27565	0.32	-0.6
6,134,069	-		PFLU_RS27565	0.32	-0.6
6,134,069	-		PFLU_RS27565	0.32	+2.3
6,134,069	-		PFLU_RS27565	0.32	-1.7
6,134,088	-		PFLU_RS27565	0.33	+1.4
6,134,208	+		PFLU_RS27565	0.38	+2.0
6,134,208	+		PFLU_RS27565	0.38	+1.5
6,134,208	+		PFLU_RS27565	0.38	-0.3
6,134,208	+		PFLU_RS27565	0.38	+3.1
6,134,208	+		PFLU_RS27565	0.38	-1.3
6,134,209	-		PFLU_RS27565	0.38	+2.2
6,134,209	-		PFLU_RS27565	0.38	+0.9
6,134,209	-		PFLU_RS27565	0.38	-2.2
6,134,209	-		PFLU_RS27565	0.38	-2.2
6,134,209	-		PFLU_RS27565	0.38	-1.0
6,134,246	+		PFLU_RS27565	0.40	-2.0
6,134,246	+		PFLU_RS27565	0.40	+1.0
6,134,246	+		PFLU_RS27565	0.40	-0.3
6,134,255	+		PFLU_RS27565	0.40	-2.0
6,134,255	+		PFLU_RS27565	0.40	-0.9
6,134,255	+		PFLU_RS27565	0.40	-0.2
6,134,256	-		PFLU_RS27565	0.40	+0.1
6,134,256	-		PFLU_RS27565	0.40	-0.2
6,134,256	-		PFLU_RS27565	0.40	+3.7
6,134,256	-		PFLU_RS27565	0.40	+0.3
6,134,256	-		PFLU_RS27565	0.40	-1.0