Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS13140

Experiment: propionate 20 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	propionate 20 mM (C)
2,969,126	+				+0.2
2,969,126	+				+1.0
2,969,126	+				+0.1
2,969,126	+				+1.4
2,969,126	+				-2.1
2,969,127	-				+1.1
2,969,130	+				+1.1
2,969,130	+				-2.2
2,969,131	-				+0.2
2,969,131	-				-1.8
2,969,131	-				-0.3
2,969,167	+				-0.3
2,969,167	+				+1.2
2,969,167	+				+0.2
2,969,186	+				-0.2
2,969,186	+				+0.8
2,969,187	-				-0.3
2,969,216	+				-1.8
2,969,216	+				+2.3
2,969,216	+				+1.7
2,969,216	+				+1.2
2,969,216	+				+0.1
2,969,216	+				-0.8
2,969,216	+				+1.0
2,969,216	+				-0.6
2,969,217	-				+1.6
2,969,217	-				+2.6
2,969,217	-				-0.3
2,969,251	+		PFLU_RS13135	0.11	+0.9
2,969,251	+		PFLU_RS13135	0.11	-1.7
2,969,252	-		PFLU_RS13135	0.11	+0.5
2,969,252	-		PFLU_RS13135	0.11	+0.2
2,969,388	-		PFLU_RS13135	0.25	+2.0
2,969,388	-		PFLU_RS13135	0.25	-3.5
2,969,388	-		PFLU_RS13135	0.25	-2.6
2,969,436	+		PFLU_RS13135	0.30	-0.4
2,969,436	+		PFLU_RS13135	0.30	-3.3
2,969,436	+		PFLU_RS13135	0.30	-1.1
2,969,436	+		PFLU_RS13135	0.30	-1.3
2,969,436	+		PFLU_RS13135	0.30	+1.0
2,969,436	+		PFLU_RS13135	0.30	-1.2
2,969,436	+		PFLU_RS13135	0.30	-2.5
2,969,436	+		PFLU_RS13135	0.30	+1.3
2,969,436	+		PFLU_RS13135	0.30	-1.3
2,969,436	+		PFLU_RS13135	0.30	-1.9
2,969,436	+		PFLU_RS13135	0.30	-1.2
2,969,436	+		PFLU_RS13135	0.30	+0.2
2,969,436	+		PFLU_RS13135	0.30	-0.8
2,969,437	-		PFLU_RS13135	0.30	-1.8
2,969,437	-		PFLU_RS13135	0.30	-2.1
2,969,437	-		PFLU_RS13135	0.30	-1.6
2,969,437	-		PFLU_RS13135	0.30	-1.9
2,969,437	-		PFLU_RS13135	0.30	+1.8
2,969,437	-		PFLU_RS13135	0.30	-2.9
2,969,437	-		PFLU_RS13135	0.30	-1.8
2,969,437	-		PFLU_RS13135	0.30	+2.6
2,969,437	-		PFLU_RS13135	0.30	-0.2
2,969,437	-		PFLU_RS13135	0.30	+1.5
2,969,437	-		PFLU_RS13135	0.30	-1.1
2,969,437	-		PFLU_RS13135	0.30	-0.3
2,969,437	-		PFLU_RS13135	0.30	-2.1
2,969,437	-		PFLU_RS13135	0.30	-2.2
2,969,437	-		PFLU_RS13135	0.30	+0.2
2,969,437	-		PFLU_RS13135	0.30	-0.8
2,969,437	-		PFLU_RS13135	0.30	+1.2
2,969,437	-		PFLU_RS13135	0.30	-0.9
2,969,437	-		PFLU_RS13135	0.30	+2.0
2,969,438	+		PFLU_RS13135	0.30	-1.2
2,969,438	+		PFLU_RS13135	0.30	+0.9
2,969,438	+		PFLU_RS13135	0.30	+0.3
2,969,438	+		PFLU_RS13135	0.30	-2.2
2,969,438	+		PFLU_RS13135	0.30	+0.6
2,969,438	+		PFLU_RS13135	0.30	-2.8
2,969,438	+		PFLU_RS13135	0.30	+0.3
2,969,438	+		PFLU_RS13135	0.30	-0.3
2,969,439	-		PFLU_RS13135	0.30	-0.3
2,969,439	-		PFLU_RS13135	0.30	-0.8
2,969,439	-		PFLU_RS13135	0.30	-0.3
2,969,439	-		PFLU_RS13135	0.30	+0.4
2,969,439	-		PFLU_RS13135	0.30	+1.4
2,969,439	-		PFLU_RS13135	0.30	-2.9
2,969,439	-		PFLU_RS13135	0.30	-1.6
2,969,439	-		PFLU_RS13135	0.30	+0.0
2,969,439	-		PFLU_RS13135	0.30	+2.6
2,969,487	+		PFLU_RS13135	0.35	+2.6
2,969,487	+		PFLU_RS13135	0.35	+2.2
2,969,487	+		PFLU_RS13135	0.35	+0.5
2,969,487	+		PFLU_RS13135	0.35	+1.5
2,969,487	+		PFLU_RS13135	0.35	+0.5
2,969,488	-		PFLU_RS13135	0.35	+0.5
2,969,488	-		PFLU_RS13135	0.35	-0.8
2,969,488	-		PFLU_RS13135	0.35	+3.2
2,969,535	+		PFLU_RS13135	0.40	+0.4
2,969,536	-		PFLU_RS13135	0.40	-1.4
2,969,585	+		PFLU_RS13135	0.45	-2.1
2,969,585	+		PFLU_RS13135	0.45	-2.3
2,969,586	-		PFLU_RS13135	0.45	-0.6
2,969,586	-		PFLU_RS13135	0.45	-0.3
2,969,586	-		PFLU_RS13135	0.45	-2.8
2,969,586	-		PFLU_RS13135	0.45	+0.9
2,969,586	-		PFLU_RS13135	0.45	-1.3
2,969,586	-		PFLU_RS13135	0.45	+2.2
2,969,586	-		PFLU_RS13135	0.45	+1.5
2,969,673	+		PFLU_RS13135	0.54	+0.2
2,969,673	+		PFLU_RS13135	0.54	-1.8
2,969,673	+		PFLU_RS13135	0.54	-1.0
2,969,673	+		PFLU_RS13135	0.54	-0.3
2,969,673	+		PFLU_RS13135	0.54	+1.5
2,969,673	+		PFLU_RS13135	0.54	-0.5
2,969,673	+		PFLU_RS13135	0.54	+0.8
2,969,673	+		PFLU_RS13135	0.54	+4.3
2,969,673	+		PFLU_RS13135	0.54	-1.3
2,969,673	+		PFLU_RS13135	0.54	+0.8
2,969,673	+		PFLU_RS13135	0.54	-1.6
2,969,673	+		PFLU_RS13135	0.54	-0.3
2,969,674	-		PFLU_RS13135	0.54	-0.7
2,969,674	-		PFLU_RS13135	0.54	-0.3
2,969,674	-		PFLU_RS13135	0.54	-0.8
2,969,674	-		PFLU_RS13135	0.54	-1.1
2,969,674	-		PFLU_RS13135	0.54	-0.2
2,969,674	-		PFLU_RS13135	0.54	+0.2
2,969,674	-		PFLU_RS13135	0.54	-1.1
2,969,674	-		PFLU_RS13135	0.54	-1.7
2,969,674	-		PFLU_RS13135	0.54	+1.1
2,969,674	-		PFLU_RS13135	0.54	-0.8
2,969,674	-		PFLU_RS13135	0.54	+1.2
2,969,674	-		PFLU_RS13135	0.54	-0.9
2,969,674	-		PFLU_RS13135	0.54	+0.1
2,969,675	+		PFLU_RS13135	0.54	-0.8
2,969,675	+		PFLU_RS13135	0.54	+0.1
2,969,675	+		PFLU_RS13135	0.54	+3.2
2,969,675	+		PFLU_RS13135	0.54	+1.0
2,969,675	+		PFLU_RS13135	0.54	-2.8
2,969,675	+		PFLU_RS13135	0.54	+1.6
2,969,676	-		PFLU_RS13135	0.54	-1.2
2,969,676	-		PFLU_RS13135	0.54	-1.9
2,969,676	-		PFLU_RS13135	0.54	+2.2
2,969,676	-		PFLU_RS13135	0.54	-1.3
2,969,676	-		PFLU_RS13135	0.54	-0.6
2,969,676	-		PFLU_RS13135	0.54	-1.1
2,969,676	-		PFLU_RS13135	0.54	-0.8
2,969,931	+		PFLU_RS13135	0.80	+1.5
2,969,932	-		PFLU_RS13135	0.80	-0.9
2,969,932	-		PFLU_RS13135	0.80	+1.2
2,969,932	-		PFLU_RS13135	0.80	+0.2
2,970,060	+				+0.8
2,970,060	+				-3.7
2,970,060	+				+0.6
2,970,060	+				+2.1
2,970,060	+				+1.5
2,970,060	+				-0.9
2,970,061	-				-2.5
2,970,061	-				+1.4
2,970,207	+				-0.9
2,970,207	+				-0.6
2,970,207	+				+1.2
2,970,207	+				+1.2
2,970,208	-				-0.4
2,970,208	-				-1.6
2,970,208	-				-0.7
2,970,208	-				-0.2
2,970,233	+				+1.9
2,970,233	+				-0.8
2,970,233	+				+1.3
2,970,234	-				-1.1
2,970,234	-				-0.4
2,970,428	+		PFLU_RS13140	0.20	+2.6
2,970,429	-		PFLU_RS13140	0.20	+0.7
2,970,429	-		PFLU_RS13140	0.20	-0.4
2,970,429	-		PFLU_RS13140	0.20	-1.4
2,970,429	-		PFLU_RS13140	0.20	-0.1
2,970,429	-		PFLU_RS13140	0.20	+0.1
2,970,429	-		PFLU_RS13140	0.20	+0.7
2,970,461	+		PFLU_RS13140	0.22	-0.9
2,970,461	+		PFLU_RS13140	0.22	-2.9
2,970,461	+		PFLU_RS13140	0.22	+0.6
2,970,461	+		PFLU_RS13140	0.22	+2.6
2,970,461	+		PFLU_RS13140	0.22	+2.0
2,970,461	+		PFLU_RS13140	0.22	-0.7
2,970,461	+		PFLU_RS13140	0.22	+3.4
2,970,461	+		PFLU_RS13140	0.22	+0.6
2,970,461	+		PFLU_RS13140	0.22	-0.5
2,970,462	-		PFLU_RS13140	0.22	+2.5
2,970,462	-		PFLU_RS13140	0.22	+3.2
2,970,462	-		PFLU_RS13140	0.22	-0.1
2,970,462	-		PFLU_RS13140	0.22	+0.4
2,970,462	-		PFLU_RS13140	0.22	+4.2
2,970,515	+		PFLU_RS13140	0.26	+0.6
2,970,515	+		PFLU_RS13140	0.26	+2.4
2,970,516	-		PFLU_RS13140	0.26	-1.6
2,970,516	-		PFLU_RS13140	0.26	-0.8
2,970,698	+		PFLU_RS13140	0.38	+1.2
2,970,698	+		PFLU_RS13140	0.38	-0.1
2,970,699	-		PFLU_RS13140	0.38	-1.6
2,970,699	-		PFLU_RS13140	0.38	-2.7
2,970,714	-		PFLU_RS13140	0.39	+0.4
2,970,714	-		PFLU_RS13140	0.39	-0.2
2,970,794	+		PFLU_RS13140	0.44	-0.4
2,970,794	+		PFLU_RS13140	0.44	+0.2
2,970,794	+		PFLU_RS13140	0.44	-0.3
2,970,794	+		PFLU_RS13140	0.44	+0.8
2,970,794	+		PFLU_RS13140	0.44	-0.8
2,970,794	+		PFLU_RS13140	0.44	+1.2
2,970,794	+		PFLU_RS13140	0.44	+0.2
2,970,794	+		PFLU_RS13140	0.44	-2.8
2,970,794	+		PFLU_RS13140	0.44	-1.9
2,970,794	+		PFLU_RS13140	0.44	-2.1
2,970,795	-		PFLU_RS13140	0.44	-1.2
2,970,795	-		PFLU_RS13140	0.44	-1.4
2,970,795	-		PFLU_RS13140	0.44	-0.8
2,970,795	-		PFLU_RS13140	0.44	-0.5
2,970,795	-		PFLU_RS13140	0.44	-1.1
2,970,795	-		PFLU_RS13140	0.44	-0.4
2,970,795	-		PFLU_RS13140	0.44	+0.2
2,970,795	-		PFLU_RS13140	0.44	-2.7
2,970,837	+		PFLU_RS13140	0.47	+1.0
2,970,993	+		PFLU_RS13140	0.57	+1.0
2,971,043	+		PFLU_RS13140	0.60	+2.1
2,971,044	-		PFLU_RS13140	0.60	+3.1
2,971,066	+		PFLU_RS13140	0.62	+0.2
2,971,181	+		PFLU_RS13140	0.69	-1.9
2,971,181	+		PFLU_RS13140	0.69	-0.8
2,971,181	+		PFLU_RS13140	0.69	-1.4
2,971,181	+		PFLU_RS13140	0.69	+2.2
2,971,182	-		PFLU_RS13140	0.69	+2.2
2,971,182	-		PFLU_RS13140	0.69	+0.2
2,971,182	-		PFLU_RS13140	0.69	-1.1
2,971,250	+		PFLU_RS13140	0.74	-2.7
2,971,251	-		PFLU_RS13140	0.74	-0.6
2,971,295	+		PFLU_RS13140	0.77	-0.2
2,971,295	+		PFLU_RS13140	0.77	-0.4
2,971,295	+		PFLU_RS13140	0.77	+0.2
2,971,295	+		PFLU_RS13140	0.77	-1.9
2,971,295	+		PFLU_RS13140	0.77	-1.9
2,971,295	+		PFLU_RS13140	0.77	+4.3
2,971,295	+		PFLU_RS13140	0.77	-0.4
2,971,295	+		PFLU_RS13140	0.77	-2.1
2,971,296	-		PFLU_RS13140	0.77	-0.6
2,971,296	-		PFLU_RS13140	0.77	-2.6
2,971,296	-		PFLU_RS13140	0.77	+1.2
2,971,296	-		PFLU_RS13140	0.77	+2.6
2,971,296	-		PFLU_RS13140	0.77	-0.5
2,971,382	-		PFLU_RS13140	0.82	+0.2
2,971,382	-		PFLU_RS13140	0.82	-1.9
2,971,400	+		PFLU_RS13140	0.84	+2.2
2,971,400	+		PFLU_RS13140	0.84	+0.9
2,971,400	+		PFLU_RS13140	0.84	+2.4
2,971,400	+		PFLU_RS13140	0.84	-0.7
2,971,400	+		PFLU_RS13140	0.84	-1.2
2,971,400	+		PFLU_RS13140	0.84	-0.4
2,971,401	-		PFLU_RS13140	0.84	+1.8
2,971,401	-		PFLU_RS13140	0.84	-1.9
2,971,402	+		PFLU_RS13140	0.84	+0.6
2,971,402	+		PFLU_RS13140	0.84	+1.6
2,971,403	-		PFLU_RS13140	0.84	-2.4
2,971,403	-		PFLU_RS13140	0.84	-0.1
2,971,430	-		PFLU_RS13140	0.86	-1.3
2,971,436	+		PFLU_RS13140	0.86	+0.9
2,971,451	+		PFLU_RS13140	0.87	-0.1
2,971,451	+		PFLU_RS13140	0.87	+0.7
2,971,451	+		PFLU_RS13140	0.87	-2.1
2,971,451	+		PFLU_RS13140	0.87	+1.8
2,971,451	+		PFLU_RS13140	0.87	-0.7
2,971,451	+		PFLU_RS13140	0.87	-2.2
2,971,452	-		PFLU_RS13140	0.87	-1.1
2,971,452	-		PFLU_RS13140	0.87	-0.4
2,971,452	-		PFLU_RS13140	0.87	+0.7
2,971,452	-		PFLU_RS13140	0.87	-1.8
2,971,452	-		PFLU_RS13140	0.87	-0.1
2,971,568	+				-0.8
2,971,568	+				-0.4
2,971,569	-				-1.1
2,971,569	-				+3.0
2,971,677	+				-1.3
2,971,719	+				+1.1
2,971,719	+				+0.9
2,971,720	-				-0.9
2,971,869	+		PFLU_RS13145	0.27	+0.7
2,972,086	+		PFLU_RS13145	0.53	-1.2
2,972,086	+		PFLU_RS13145	0.53	+0.2
2,972,135	+		PFLU_RS13145	0.59	-1.4
2,972,135	+		PFLU_RS13145	0.59	-0.7
2,972,135	+		PFLU_RS13145	0.59	-1.8
2,972,135	+		PFLU_RS13145	0.59	-0.1
2,972,135	+		PFLU_RS13145	0.59	-1.8
2,972,136	-		PFLU_RS13145	0.60	-0.2
2,972,136	-		PFLU_RS13145	0.60	+0.5
2,972,141	+		PFLU_RS13145	0.60	-0.5
2,972,209	+		PFLU_RS13145	0.68	-0.8
2,972,209	+		PFLU_RS13145	0.68	+1.3
2,972,209	+		PFLU_RS13145	0.68	-1.7
2,972,209	+		PFLU_RS13145	0.68	-0.7
2,972,209	+		PFLU_RS13145	0.68	+1.2
2,972,210	-		PFLU_RS13145	0.68	+2.6
2,972,210	-		PFLU_RS13145	0.68	-0.4
2,972,210	-		PFLU_RS13145	0.68	-2.6
2,972,210	-		PFLU_RS13145	0.68	-1.1
2,972,210	-		PFLU_RS13145	0.68	-0.1
2,972,452	-				-2.4
2,972,452	-				-0.8
2,972,467	+				-2.3
2,972,483	+				-0.8
2,972,483	+				-1.4
2,972,483	+				-1.4
2,972,524	+				+0.9
2,972,524	+				+2.5
2,972,524	+				-1.0
2,972,538	-				+1.6
2,972,538	-				-1.9
2,972,538	-				+1.4
2,972,538	-				+1.9
2,972,538	-				-1.1
2,972,538	-				+0.7
2,972,633	+		PFLU_RS13150	0.37	-1.8
2,972,633	+		PFLU_RS13150	0.37	-0.6
2,972,633	+		PFLU_RS13150	0.37	-4.1
2,972,633	+		PFLU_RS13150	0.37	-0.9
2,972,633	+		PFLU_RS13150	0.37	+1.3
2,972,634	-		PFLU_RS13150	0.38	-0.7