Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS17730

Experiment: D-Glucosamine Hydrochloride 10 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucosamine Hydrochloride 10 mM (C)
4,024,807	-				+0.2
4,024,831	+				+0.4
4,024,831	+				-0.3
4,024,831	+				+0.7
4,024,831	+				+0.2
4,024,831	+				+0.7
4,024,831	+				-1.6
4,024,831	+				-0.8
4,024,831	+				+0.2
4,024,831	+				-1.9
4,024,831	+				+0.2
4,024,832	-				+1.1
4,024,832	-				+0.5
4,024,832	-				-0.9
4,024,832	-				+0.5
4,024,832	-				+0.7
4,024,832	-				+0.5
4,024,832	-				-1.2
4,024,832	-				-1.3
4,024,835	+				+0.9
4,024,835	+				-1.1
4,024,907	+		PFLU_RS17725	0.15	+2.0
4,024,932	-		PFLU_RS17725	0.19	+0.7
4,024,955	+		PFLU_RS17725	0.23	-0.8
4,024,955	+		PFLU_RS17725	0.23	-2.1
4,024,956	-		PFLU_RS17725	0.23	+0.8
4,024,970	+		PFLU_RS17725	0.26	+0.9
4,024,970	+		PFLU_RS17725	0.26	+0.0
4,024,970	+		PFLU_RS17725	0.26	+2.1
4,024,970	+		PFLU_RS17725	0.26	+0.9
4,024,971	-		PFLU_RS17725	0.26	-0.6
4,024,971	-		PFLU_RS17725	0.26	+2.5
4,024,971	-		PFLU_RS17725	0.26	+0.9
4,024,971	-		PFLU_RS17725	0.26	-0.6
4,024,971	-		PFLU_RS17725	0.26	-1.5
4,024,971	-		PFLU_RS17725	0.26	+0.1
4,024,971	-		PFLU_RS17725	0.26	+1.3
4,025,084	+		PFLU_RS17725	0.45	-0.1
4,025,084	+		PFLU_RS17725	0.45	-0.1
4,025,084	+		PFLU_RS17725	0.45	-1.3
4,025,085	-		PFLU_RS17725	0.45	+0.2
4,025,159	+		PFLU_RS17725	0.58	+0.3
4,025,159	+		PFLU_RS17725	0.58	-1.1
4,025,159	+		PFLU_RS17725	0.58	+0.9
4,025,159	+		PFLU_RS17725	0.58	-1.1
4,025,159	+		PFLU_RS17725	0.58	+2.5
4,025,160	-		PFLU_RS17725	0.58	+1.3
4,025,160	-		PFLU_RS17725	0.58	+2.0
4,025,160	-		PFLU_RS17725	0.58	+0.2
4,025,160	-		PFLU_RS17725	0.58	+3.5
4,025,160	-		PFLU_RS17725	0.58	+0.4
4,025,160	-		PFLU_RS17725	0.58	+0.2
4,025,160	-		PFLU_RS17725	0.58	+0.3
4,025,160	-		PFLU_RS17725	0.58	-0.8
4,025,160	-		PFLU_RS17725	0.58	+2.0
4,025,160	-		PFLU_RS17725	0.58	+0.2
4,025,518	+				+1.5
4,025,518	+				+0.9
4,025,518	+				-2.1
4,025,518	+				+0.9
4,025,518	+				+2.2
4,025,518	+				-0.6
4,025,518	+				-1.1
4,025,518	+				-0.1
4,025,518	+				-0.9
4,025,519	-				+0.2
4,025,519	-				+1.3
4,025,519	-				+1.3
4,025,519	-				+1.3
4,025,519	-				+0.5
4,025,519	-				+1.0
4,025,520	+				-1.4
4,025,520	+				+2.1
4,025,520	+				+0.7
4,025,521	-				+2.4
4,025,521	-				-1.5
4,025,521	-				-0.1
4,025,521	-				+0.8
4,025,570	+				-1.5
4,025,571	-				+2.5
4,025,571	-				+0.2
4,025,575	-				-0.5
4,025,575	-				+0.5
4,025,594	+				-0.6
4,025,595	-				-0.6
4,025,595	-				-0.2
4,025,595	-				-0.1
4,025,621	+				-0.3
4,025,621	+				-1.6
4,025,622	-				-1.6
4,025,622	-				-0.7
4,025,622	-				-0.3
4,025,622	-				-1.1
4,025,793	+		PFLU_RS17730	0.17	+1.8
4,025,793	+		PFLU_RS17730	0.17	-1.2
4,025,794	-		PFLU_RS17730	0.18	+1.2
4,025,794	-		PFLU_RS17730	0.18	+0.2
4,025,794	-		PFLU_RS17730	0.18	-1.9
4,025,794	-		PFLU_RS17730	0.18	+0.4
4,025,794	-		PFLU_RS17730	0.18	+0.9
4,025,796	+		PFLU_RS17730	0.18	-1.4
4,025,796	+		PFLU_RS17730	0.18	+2.5
4,025,797	-		PFLU_RS17730	0.18	+1.2
4,025,797	-		PFLU_RS17730	0.18	+1.5
4,025,797	-		PFLU_RS17730	0.18	-0.9
4,025,797	-		PFLU_RS17730	0.18	-0.9
4,025,797	-		PFLU_RS17730	0.18	-0.9
4,025,797	-		PFLU_RS17730	0.18	-0.1
4,025,797	-		PFLU_RS17730	0.18	-0.1
4,025,962	-		PFLU_RS17730	0.37	+0.5
4,026,174	-		PFLU_RS17730	0.63	-0.5
4,026,195	+		PFLU_RS17730	0.65	+1.5
4,026,196	-		PFLU_RS17730	0.65	-1.7
4,026,225	+		PFLU_RS17730	0.69	+2.3
4,026,225	+		PFLU_RS17730	0.69	-0.5
4,026,254	+		PFLU_RS17730	0.72	+0.9
4,026,254	+		PFLU_RS17730	0.72	-1.2
4,026,254	+		PFLU_RS17730	0.72	+0.2
4,026,254	+		PFLU_RS17730	0.72	-1.1
4,026,254	+		PFLU_RS17730	0.72	+0.9
4,026,254	+		PFLU_RS17730	0.72	+0.5
4,026,254	+		PFLU_RS17730	0.72	+2.5
4,026,254	+		PFLU_RS17730	0.72	-2.0
4,026,254	+		PFLU_RS17730	0.72	-0.9
4,026,254	+		PFLU_RS17730	0.72	+1.4
4,026,254	+		PFLU_RS17730	0.72	-0.9
4,026,254	+		PFLU_RS17730	0.72	-1.1
4,026,254	+		PFLU_RS17730	0.72	-1.3
4,026,255	-		PFLU_RS17730	0.72	+1.7
4,026,255	-		PFLU_RS17730	0.72	-0.8
4,026,255	-		PFLU_RS17730	0.72	-0.1
4,026,255	-		PFLU_RS17730	0.72	-1.7
4,026,255	-		PFLU_RS17730	0.72	+3.5
4,026,255	-		PFLU_RS17730	0.72	+1.1
4,026,255	-		PFLU_RS17730	0.72	+1.5
4,026,255	-		PFLU_RS17730	0.72	+1.5
4,026,311	+		PFLU_RS17730	0.79	-1.4
4,026,311	+		PFLU_RS17730	0.79	+0.9
4,026,312	-		PFLU_RS17730	0.79	+0.5
4,026,312	-		PFLU_RS17730	0.79	+2.7
4,026,366	+		PFLU_RS17730	0.85	-2.9
4,026,366	+		PFLU_RS17730	0.85	+0.7
4,026,366	+		PFLU_RS17730	0.85	-0.1
4,026,366	+		PFLU_RS17730	0.85	+1.5
4,026,366	+		PFLU_RS17730	0.85	-1.4
4,026,366	+		PFLU_RS17730	0.85	+0.2
4,026,366	+		PFLU_RS17730	0.85	-2.1
4,026,366	+		PFLU_RS17730	0.85	+1.5
4,026,366	+		PFLU_RS17730	0.85	-1.2
4,026,366	+		PFLU_RS17730	0.85	+0.9
4,026,367	-		PFLU_RS17730	0.86	-0.6
4,026,367	-		PFLU_RS17730	0.86	-0.5
4,026,367	-		PFLU_RS17730	0.86	+0.5
4,026,367	-		PFLU_RS17730	0.86	-0.2
4,026,367	-		PFLU_RS17730	0.86	+0.2
4,026,367	-		PFLU_RS17730	0.86	-0.1
4,026,367	-		PFLU_RS17730	0.86	+0.7
4,026,367	-		PFLU_RS17730	0.86	+0.9
4,026,367	-		PFLU_RS17730	0.86	+0.2
4,026,367	-		PFLU_RS17730	0.86	+0.9
4,026,486	+				+0.4
4,026,486	+				-2.0
4,026,486	+				-0.9
4,026,486	+				-1.2
4,026,486	+				+1.3
4,026,486	+				-0.5
4,026,486	+				-0.3
4,026,487	-				+0.9
4,026,517	+				-1.1
4,026,517	+				-0.3
4,026,517	+				-1.2
4,026,517	+				-1.9
4,026,517	+				+1.2
4,026,517	+				-0.6
4,026,517	+				-0.5
4,026,517	+				+0.9
4,026,517	+				+1.1
4,026,517	+				+0.2
4,026,517	+				-0.5
4,026,517	+				-0.4
4,026,517	+				-0.3
4,026,518	-				+1.7
4,026,518	-				-0.8
4,026,518	-				+2.9
4,026,518	-				-0.8
4,026,518	-				+0.5
4,026,518	-				+2.5
4,026,518	-				+0.5
4,026,518	-				+2.8
4,026,518	-				-1.8
4,026,518	-				-1.8
4,026,518	-				-0.9
4,026,671	+		PFLU_RS17735	0.17	+3.2
4,026,672	-		PFLU_RS17735	0.17	+1.5
4,026,753	+		PFLU_RS17735	0.26	-1.8
4,026,753	+		PFLU_RS17735	0.26	+0.2
4,026,999	-		PFLU_RS17735	0.54	+1.2
4,026,999	-		PFLU_RS17735	0.54	+2.2
4,027,010	+		PFLU_RS17735	0.55	-0.9
4,027,011	-		PFLU_RS17735	0.55	-1.3
4,027,024	+		PFLU_RS17735	0.57	+0.9
4,027,024	+		PFLU_RS17735	0.57	-1.5
4,027,024	+		PFLU_RS17735	0.57	-1.2
4,027,024	+		PFLU_RS17735	0.57	-0.1
4,027,024	+		PFLU_RS17735	0.57	-0.3
4,027,025	-		PFLU_RS17735	0.57	+0.2
4,027,025	-		PFLU_RS17735	0.57	-1.8
4,027,025	-		PFLU_RS17735	0.57	+0.7
4,027,025	-		PFLU_RS17735	0.57	+0.9
4,027,025	-		PFLU_RS17735	0.57	+2.5
4,027,025	-		PFLU_RS17735	0.57	+0.2
4,027,025	-		PFLU_RS17735	0.57	+1.1
4,027,025	-		PFLU_RS17735	0.57	-0.5
4,027,025	-		PFLU_RS17735	0.57	+0.9
4,027,025	-		PFLU_RS17735	0.57	-0.1
4,027,025	-		PFLU_RS17735	0.57	+0.9
4,027,066	+		PFLU_RS17735	0.61	+1.2
4,027,067	-		PFLU_RS17735	0.61	-0.8
4,027,067	-		PFLU_RS17735	0.61	-1.5
4,027,124	+		PFLU_RS17735	0.68	+2.1
4,027,124	+		PFLU_RS17735	0.68	-0.7
4,027,125	-		PFLU_RS17735	0.68	-1.2
4,027,125	-		PFLU_RS17735	0.68	-0.9
4,027,373	+				+0.5
4,027,373	+				-1.9
4,027,373	+				-1.7
4,027,374	-				+0.2
4,027,374	-				+0.2
4,027,374	-				-0.2
4,027,374	-				-0.5
4,027,389	+				-0.5
4,027,400	+				-0.9
4,027,400	+				+0.9
4,027,400	+				-0.9
4,027,400	+				-0.5
4,027,400	+				-0.5
4,027,400	+				-1.4
4,027,400	+				-0.1
4,027,400	+				-0.3
4,027,401	-				+1.5
4,027,401	-				+0.7
4,027,401	-				+1.9
4,027,401	-				-0.1
4,027,401	-				-1.2
4,027,401	-				-0.1
4,027,469	+				-0.9