Experiment: D-Glucosamine Hydrochloride 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS03470 and PFLU_RS03475 overlap by 86 nucleotides PFLU_RS03475 and PFLU_RS03480 overlap by 4 nucleotides
PFLU_RS03470: PFLU_RS03470 - CusA/CzcA family heavy metal efflux RND transporter, at 799,006 to 802,152
_RS03470
PFLU_RS03475: PFLU_RS03475 - heavy metal sensor histidine kinase, at 802,067 to 803,503
_RS03475
PFLU_RS03480: PFLU_RS03480 - heavy metal response regulator transcription factor, at 803,500 to 804,174
_RS03480
Position (kb) 802
803
804 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 801.288 kb on + strand, within PFLU_RS03470 at 801.295 kb on + strand, within PFLU_RS03470 at 801.295 kb on + strand, within PFLU_RS03470 at 801.295 kb on + strand, within PFLU_RS03470 at 801.295 kb on + strand, within PFLU_RS03470 at 801.296 kb on - strand, within PFLU_RS03470 at 801.296 kb on - strand, within PFLU_RS03470 at 801.418 kb on - strand, within PFLU_RS03470 at 801.822 kb on + strand, within PFLU_RS03470 at 801.823 kb on - strand, within PFLU_RS03470 at 802.059 kb on + strand at 802.059 kb on + strand at 802.060 kb on - strand at 802.068 kb on + strand at 802.068 kb on + strand at 802.069 kb on - strand at 802.069 kb on - strand at 802.069 kb on - strand at 802.102 kb on + strand at 802.102 kb on + strand at 802.102 kb on + strand at 802.102 kb on + strand at 802.102 kb on + strand at 802.102 kb on + strand at 802.102 kb on + strand at 802.102 kb on + strand at 802.103 kb on - strand at 802.103 kb on - strand at 802.357 kb on - strand, within PFLU_RS03475 at 802.357 kb on - strand, within PFLU_RS03475 at 802.377 kb on - strand, within PFLU_RS03475 at 802.377 kb on - strand, within PFLU_RS03475 at 802.377 kb on - strand, within PFLU_RS03475 at 802.377 kb on - strand, within PFLU_RS03475 at 802.652 kb on - strand, within PFLU_RS03475 at 802.674 kb on + strand, within PFLU_RS03475 at 802.674 kb on + strand, within PFLU_RS03475 at 802.674 kb on + strand, within PFLU_RS03475 at 802.674 kb on + strand, within PFLU_RS03475 at 802.674 kb on + strand, within PFLU_RS03475 at 802.674 kb on + strand, within PFLU_RS03475 at 802.674 kb on + strand, within PFLU_RS03475 at 802.674 kb on + strand, within PFLU_RS03475 at 802.674 kb on + strand, within PFLU_RS03475 at 802.675 kb on - strand, within PFLU_RS03475 at 802.675 kb on - strand, within PFLU_RS03475 at 802.675 kb on - strand, within PFLU_RS03475 at 802.675 kb on - strand, within PFLU_RS03475 at 802.675 kb on - strand, within PFLU_RS03475 at 802.675 kb on - strand, within PFLU_RS03475 at 802.675 kb on - strand, within PFLU_RS03475 at 802.675 kb on - strand, within PFLU_RS03475 at 802.675 kb on - strand, within PFLU_RS03475 at 802.675 kb on - strand, within PFLU_RS03475 at 802.675 kb on - strand, within PFLU_RS03475 at 802.675 kb on - strand, within PFLU_RS03475 at 802.675 kb on - strand, within PFLU_RS03475 at 803.016 kb on + strand, within PFLU_RS03475 at 803.016 kb on + strand, within PFLU_RS03475 at 803.016 kb on + strand, within PFLU_RS03475 at 803.016 kb on + strand, within PFLU_RS03475 at 803.017 kb on - strand, within PFLU_RS03475 at 803.017 kb on - strand, within PFLU_RS03475 at 803.149 kb on - strand, within PFLU_RS03475 at 803.149 kb on - strand, within PFLU_RS03475 at 803.256 kb on + strand, within PFLU_RS03475 at 803.256 kb on + strand, within PFLU_RS03475 at 803.256 kb on + strand, within PFLU_RS03475 at 803.256 kb on + strand, within PFLU_RS03475 at 803.256 kb on + strand, within PFLU_RS03475 at 803.256 kb on + strand, within PFLU_RS03475 at 803.256 kb on + strand, within PFLU_RS03475 at 803.256 kb on + strand, within PFLU_RS03475 at 803.257 kb on - strand, within PFLU_RS03475 at 803.257 kb on - strand, within PFLU_RS03475 at 803.257 kb on - strand, within PFLU_RS03475 at 803.257 kb on - strand, within PFLU_RS03475 at 803.257 kb on - strand, within PFLU_RS03475 at 803.257 kb on - strand, within PFLU_RS03475 at 803.257 kb on - strand, within PFLU_RS03475 at 803.257 kb on - strand, within PFLU_RS03475 at 803.257 kb on - strand, within PFLU_RS03475 at 803.257 kb on - strand, within PFLU_RS03475 at 803.416 kb on - strand at 803.416 kb on - strand at 803.523 kb on - strand at 803.652 kb on + strand, within PFLU_RS03480 at 803.652 kb on + strand, within PFLU_RS03480 at 803.653 kb on - strand, within PFLU_RS03480 at 803.653 kb on - strand, within PFLU_RS03480 at 803.653 kb on - strand, within PFLU_RS03480 at 803.750 kb on + strand, within PFLU_RS03480 at 803.885 kb on + strand, within PFLU_RS03480 at 803.885 kb on + strand, within PFLU_RS03480 at 803.885 kb on + strand, within PFLU_RS03480 at 803.886 kb on - strand, within PFLU_RS03480 at 803.886 kb on - strand, within PFLU_RS03480 at 803.886 kb on - strand, within PFLU_RS03480 at 803.886 kb on - strand, within PFLU_RS03480 at 804.101 kb on + strand, within PFLU_RS03480 at 804.102 kb on - strand, within PFLU_RS03480 at 804.102 kb on - strand, within PFLU_RS03480 at 804.102 kb on - strand, within PFLU_RS03480 at 804.131 kb on + strand at 804.132 kb on - strand at 804.169 kb on - strand at 804.218 kb on + strand at 804.219 kb on - strand at 804.219 kb on - strand at 804.232 kb on - strand at 804.238 kb on + strand at 804.239 kb on - strand at 804.262 kb on - strand at 804.268 kb on - strand at 804.268 kb on - strand at 804.372 kb on + strand at 804.373 kb on - strand at 804.373 kb on - strand at 804.373 kb on - strand at 804.373 kb on - strand at 804.414 kb on + strand at 804.414 kb on + strand at 804.414 kb on + strand at 804.415 kb on - strand at 804.449 kb on - strand at 804.451 kb on + strand at 804.451 kb on + strand at 804.451 kb on + strand at 804.451 kb on + strand at 804.451 kb on + strand at 804.451 kb on + strand at 804.452 kb on - strand at 804.452 kb on - strand at 804.452 kb on - strand at 804.452 kb on - strand at 804.452 kb on - strand at 804.452 kb on - strand at 804.486 kb on + strand at 804.486 kb on + strand at 804.486 kb on + strand at 804.486 kb on + strand at 804.486 kb on + strand at 804.487 kb on - strand at 804.487 kb on - strand at 804.487 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucosamine Hydrochloride 10 mM (C) remove 801,288 + PFLU_RS03470 0.73 -1.0 801,295 + PFLU_RS03470 0.73 -0.9 801,295 + PFLU_RS03470 0.73 +1.4 801,295 + PFLU_RS03470 0.73 -0.4 801,295 + PFLU_RS03470 0.73 -1.0 801,296 - PFLU_RS03470 0.73 -0.4 801,296 - PFLU_RS03470 0.73 +0.3 801,418 - PFLU_RS03470 0.77 +0.4 801,822 + PFLU_RS03470 0.89 +1.8 801,823 - PFLU_RS03470 0.90 -2.1 802,059 + -0.5 802,059 + -1.1 802,060 - -2.3 802,068 + +1.4 802,068 + +1.4 802,069 - +2.0 802,069 - -2.3 802,069 - +1.0 802,102 + +0.4 802,102 + -0.7 802,102 + -0.7 802,102 + +2.0 802,102 + -2.2 802,102 + -0.3 802,102 + +1.2 802,102 + -0.9 802,103 - -0.3 802,103 - -0.3 802,357 - PFLU_RS03475 0.20 -1.0 802,357 - PFLU_RS03475 0.20 -1.0 802,377 - PFLU_RS03475 0.22 -1.8 802,377 - PFLU_RS03475 0.22 +1.0 802,377 - PFLU_RS03475 0.22 -1.0 802,377 - PFLU_RS03475 0.22 +0.7 802,652 - PFLU_RS03475 0.41 -0.1 802,674 + PFLU_RS03475 0.42 -1.0 802,674 + PFLU_RS03475 0.42 -0.3 802,674 + PFLU_RS03475 0.42 +0.5 802,674 + PFLU_RS03475 0.42 -1.0 802,674 + PFLU_RS03475 0.42 +1.1 802,674 + PFLU_RS03475 0.42 -0.6 802,674 + PFLU_RS03475 0.42 +1.0 802,674 + PFLU_RS03475 0.42 -2.3 802,674 + PFLU_RS03475 0.42 +0.9 802,675 - PFLU_RS03475 0.42 -0.8 802,675 - PFLU_RS03475 0.42 +0.4 802,675 - PFLU_RS03475 0.42 +0.9 802,675 - PFLU_RS03475 0.42 -1.1 802,675 - PFLU_RS03475 0.42 -0.6 802,675 - PFLU_RS03475 0.42 -1.6 802,675 - PFLU_RS03475 0.42 +2.4 802,675 - PFLU_RS03475 0.42 -1.5 802,675 - PFLU_RS03475 0.42 -1.1 802,675 - PFLU_RS03475 0.42 +1.8 802,675 - PFLU_RS03475 0.42 +0.0 802,675 - PFLU_RS03475 0.42 +0.9 802,675 - PFLU_RS03475 0.42 -1.0 803,016 + PFLU_RS03475 0.66 -0.8 803,016 + PFLU_RS03475 0.66 -2.9 803,016 + PFLU_RS03475 0.66 -0.8 803,016 + PFLU_RS03475 0.66 -1.6 803,017 - PFLU_RS03475 0.66 +0.4 803,017 - PFLU_RS03475 0.66 -0.4 803,149 - PFLU_RS03475 0.75 +0.7 803,149 - PFLU_RS03475 0.75 -0.7 803,256 + PFLU_RS03475 0.83 +0.0 803,256 + PFLU_RS03475 0.83 +0.9 803,256 + PFLU_RS03475 0.83 -1.9 803,256 + PFLU_RS03475 0.83 -0.9 803,256 + PFLU_RS03475 0.83 -0.7 803,256 + PFLU_RS03475 0.83 -1.6 803,256 + PFLU_RS03475 0.83 -0.7 803,256 + PFLU_RS03475 0.83 +0.3 803,257 - PFLU_RS03475 0.83 +0.4 803,257 - PFLU_RS03475 0.83 +0.6 803,257 - PFLU_RS03475 0.83 +1.4 803,257 - PFLU_RS03475 0.83 -1.1 803,257 - PFLU_RS03475 0.83 -0.3 803,257 - PFLU_RS03475 0.83 +0.1 803,257 - PFLU_RS03475 0.83 -2.0 803,257 - PFLU_RS03475 0.83 +1.0 803,257 - PFLU_RS03475 0.83 -0.6 803,257 - PFLU_RS03475 0.83 -0.8 803,416 - -0.4 803,416 - -1.0 803,523 - +1.4 803,652 + PFLU_RS03480 0.23 +0.4 803,652 + PFLU_RS03480 0.23 +0.4 803,653 - PFLU_RS03480 0.23 -0.3 803,653 - PFLU_RS03480 0.23 -0.8 803,653 - PFLU_RS03480 0.23 +0.4 803,750 + PFLU_RS03480 0.37 -0.6 803,885 + PFLU_RS03480 0.57 -1.2 803,885 + PFLU_RS03480 0.57 -1.1 803,885 + PFLU_RS03480 0.57 -1.3 803,886 - PFLU_RS03480 0.57 +0.2 803,886 - PFLU_RS03480 0.57 -0.5 803,886 - PFLU_RS03480 0.57 +2.0 803,886 - PFLU_RS03480 0.57 -0.3 804,101 + PFLU_RS03480 0.89 -2.3 804,102 - PFLU_RS03480 0.89 -1.1 804,102 - PFLU_RS03480 0.89 +1.7 804,102 - PFLU_RS03480 0.89 -1.5 804,131 + -0.3 804,132 - +0.4 804,169 - -0.1 804,218 + +2.4 804,219 - +0.2 804,219 - -0.9 804,232 - +2.8 804,238 + -1.9 804,239 - -0.6 804,262 - -0.4 804,268 - -0.6 804,268 - -0.2 804,372 + +2.4 804,373 - +1.4 804,373 - +1.4 804,373 - +1.0 804,373 - +1.8 804,414 + +0.1 804,414 + +1.0 804,414 + +0.4 804,415 - -0.6 804,449 - +1.3 804,451 + -2.0 804,451 + +0.4 804,451 + +1.0 804,451 + +0.4 804,451 + -1.1 804,451 + -1.1 804,452 - +0.2 804,452 - +1.7 804,452 - -1.2 804,452 - +0.7 804,452 - -0.4 804,452 - -0.9 804,486 + -0.4 804,486 + +0.6 804,486 + -1.2 804,486 + -1.4 804,486 + -1.6 804,487 - -1.1 804,487 - -0.3 804,487 - +1.1
Or see this region's nucleotide sequence