Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS29165

Experiment: Choline chloride 10 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline chloride 10 mM (C)
6,484,256	+		PFLU_RS29160	0.59	+0.8
6,484,256	+		PFLU_RS29160	0.59	-0.4
6,484,256	+		PFLU_RS29160	0.59	+0.4
6,484,256	+		PFLU_RS29160	0.59	+0.7
6,484,256	+		PFLU_RS29160	0.59	+3.0
6,484,256	+		PFLU_RS29160	0.59	+1.0
6,484,256	+		PFLU_RS29160	0.59	-0.6
6,484,256	+		PFLU_RS29160	0.59	+0.1
6,484,257	-		PFLU_RS29160	0.59	-0.9
6,484,257	-		PFLU_RS29160	0.59	+0.6
6,484,257	-		PFLU_RS29160	0.59	+0.7
6,484,257	-		PFLU_RS29160	0.59	-1.9
6,484,257	-		PFLU_RS29160	0.59	+1.1
6,484,257	-		PFLU_RS29160	0.59	+2.0
6,484,257	-		PFLU_RS29160	0.59	-0.4
6,484,257	-		PFLU_RS29160	0.59	+0.8
6,484,257	-		PFLU_RS29160	0.59	+1.1
6,484,257	-		PFLU_RS29160	0.59	+0.4
6,484,257	-		PFLU_RS29160	0.59	+1.1
6,484,257	-		PFLU_RS29160	0.59	+1.2
6,484,257	-		PFLU_RS29160	0.59	+0.4
6,484,257	-		PFLU_RS29160	0.59	-0.1
6,484,257	-		PFLU_RS29160	0.59	-0.2
6,484,257	-		PFLU_RS29160	0.59	-0.2
6,484,257	-		PFLU_RS29160	0.59	-0.4
6,484,257	-		PFLU_RS29160	0.59	-0.0
6,484,349	+		PFLU_RS29160	0.64	-0.3
6,484,349	+		PFLU_RS29160	0.64	-1.0
6,484,350	-		PFLU_RS29160	0.64	-1.5
6,484,457	+		PFLU_RS29160	0.69	-0.8
6,484,457	+		PFLU_RS29160	0.69	-3.2
6,484,457	+		PFLU_RS29160	0.69	-0.3
6,484,457	+		PFLU_RS29160	0.69	-0.6
6,484,457	+		PFLU_RS29160	0.69	+0.8
6,484,457	+		PFLU_RS29160	0.69	-1.3
6,484,457	+		PFLU_RS29160	0.69	-0.2
6,484,457	+		PFLU_RS29160	0.69	+1.4
6,484,457	+		PFLU_RS29160	0.69	+0.3
6,484,457	+		PFLU_RS29160	0.69	-0.7
6,484,457	+		PFLU_RS29160	0.69	+1.2
6,484,457	+		PFLU_RS29160	0.69	+0.7
6,484,458	-		PFLU_RS29160	0.69	-2.7
6,484,458	-		PFLU_RS29160	0.69	+0.8
6,484,458	-		PFLU_RS29160	0.69	-0.9
6,484,458	-		PFLU_RS29160	0.69	-0.2
6,484,458	-		PFLU_RS29160	0.69	-1.0
6,484,458	-		PFLU_RS29160	0.69	+0.7
6,484,458	-		PFLU_RS29160	0.69	+0.7
6,484,458	-		PFLU_RS29160	0.69	-1.7
6,484,458	-		PFLU_RS29160	0.69	-0.7
6,484,528	+		PFLU_RS29160	0.73	-0.1
6,484,528	+		PFLU_RS29160	0.73	-0.9
6,484,529	-		PFLU_RS29160	0.73	-1.3
6,484,626	+		PFLU_RS29160	0.78	+0.0
6,484,626	+		PFLU_RS29160	0.78	-3.7
6,484,627	-		PFLU_RS29160	0.78	+0.8
6,484,627	-		PFLU_RS29160	0.78	-0.4
6,484,627	-		PFLU_RS29160	0.78	-2.6
6,484,627	-		PFLU_RS29160	0.78	+0.0
6,484,674	-		PFLU_RS29160	0.81	+0.8
6,484,674	-		PFLU_RS29160	0.81	+2.8
6,484,793	+		PFLU_RS29160	0.87	-2.2
6,484,793	+		PFLU_RS29160	0.87	-0.2
6,484,793	+		PFLU_RS29160	0.87	+0.3
6,484,794	-		PFLU_RS29160	0.87	+0.8
6,484,794	-		PFLU_RS29160	0.87	+1.1
6,484,794	-		PFLU_RS29160	0.87	-2.2
6,484,836	+		PFLU_RS29160	0.89	+0.1
6,484,836	+		PFLU_RS29160	0.89	+0.6
6,485,014	+				+1.3
6,485,014	+				-0.4
6,485,014	+				-0.6
6,485,014	+				+0.8
6,485,014	+				+0.2
6,485,014	+				+2.8
6,485,014	+				-1.2
6,485,014	+				-0.0
6,485,015	-				-0.0
6,485,015	-				+0.1
6,485,015	-				+2.4
6,485,015	-				+0.6
6,485,015	-				+0.8
6,485,015	-				-0.2
6,485,015	-				-0.6
6,485,020	+				-0.4
6,485,020	+				+0.2
6,485,020	+				-0.9
6,485,020	+				-0.5
6,485,020	+				+1.1
6,485,020	+				-0.2
6,485,021	-				+1.0
6,485,021	-				+0.6
6,485,021	-				+0.5
6,485,021	-				-1.5
6,485,040	+				-0.3
6,485,056	+				-0.2
6,485,057	-				-1.0
6,485,057	-				+0.6
6,485,057	-				-0.5
6,485,057	-				-1.4
6,485,057	-				-0.1
6,485,090	+				-0.3
6,485,090	+				+0.7
6,485,090	+				-0.5
6,485,090	+				-0.7
6,485,090	+				-0.1
6,485,090	+				+0.7
6,485,090	+				-0.4
6,485,090	+				+1.2
6,485,090	+				+0.2
6,485,090	+				-1.7
6,485,090	+				+1.1
6,485,090	+				+1.2
6,485,090	+				+1.8
6,485,091	-				+1.1
6,485,091	-				+0.2
6,485,091	-				+0.2
6,485,091	-				+1.1
6,485,091	-				-1.4
6,485,091	-				-0.2
6,485,091	-				-0.2
6,485,091	-				+0.2
6,485,091	-				-0.7
6,485,091	-				-0.5
6,485,091	-				+0.3
6,485,091	-				+0.5
6,485,091	-				+1.4
6,485,091	-				+1.4
6,485,091	-				+0.9
6,485,091	-				-1.7
6,485,091	-				+0.5
6,485,091	-				-1.6
6,485,091	-				-0.5
6,485,091	-				-1.1
6,485,091	-				-0.2
6,485,091	-				+0.4
6,485,091	-				+0.1
6,485,091	-				+1.0
6,485,094	+				-1.0
6,485,094	+				-2.0
6,485,094	+				-1.0
6,485,094	+				+0.5
6,485,094	+				-0.2
6,485,094	+				+1.1
6,485,094	+				+0.2
6,485,094	+				+1.0
6,485,094	+				+0.6
6,485,094	+				-1.5
6,485,094	+				-0.1
6,485,094	+				+0.8
6,485,094	+				+0.2
6,485,094	+				+0.9
6,485,094	+				+0.4
6,485,094	+				-0.7
6,485,095	-				-0.7
6,485,095	-				-1.6
6,485,095	-				-2.0
6,485,095	-				+0.2
6,485,095	-				+1.0
6,485,095	-				+1.7
6,485,095	-				-0.2
6,485,095	-				+0.9
6,485,095	-				-0.5
6,485,095	-				+1.0
6,485,095	-				-0.6
6,485,095	-				-0.7
6,485,095	-				+0.3
6,485,095	-				+1.0
6,485,095	-				-0.9
6,485,095	-				-0.0
6,485,095	-				+0.4
6,485,127	+				-0.5
6,485,127	+				+0.9
6,485,127	+				-0.2
6,485,127	+				+0.1
6,485,127	+				-0.0
6,485,128	-				-0.6
6,485,128	-				+2.0
6,485,303	-		PFLU_RS29165	0.45	-0.5
6,485,311	+		PFLU_RS29165	0.47	-1.5
6,485,311	+		PFLU_RS29165	0.47	+0.6
6,485,312	-		PFLU_RS29165	0.47	-0.6
6,485,312	-		PFLU_RS29165	0.47	-0.6
6,485,312	-		PFLU_RS29165	0.47	-2.0
6,485,353	+		PFLU_RS29165	0.56	-2.9
6,485,354	-		PFLU_RS29165	0.56	-3.4
6,485,557	-				-0.7
6,485,557	-				-1.0
6,485,776	+		PFLU_RS31200	0.18	+2.2
6,485,776	+		PFLU_RS31200	0.18	+0.4
6,485,815	+		PFLU_RS31200	0.21	-0.4
6,485,893	+		PFLU_RS31200	0.28	+0.0
6,485,893	+		PFLU_RS31200	0.28	+2.0
6,485,893	+		PFLU_RS31200	0.28	+0.9
6,485,972	-		PFLU_RS31200	0.34	+1.4
6,486,050	-		PFLU_RS31200	0.40	+0.0
6,486,050	-		PFLU_RS31200	0.40	-0.3
6,486,050	-		PFLU_RS31200	0.40	-0.1
6,486,050	-		PFLU_RS31200	0.40	-1.0
6,486,166	+		PFLU_RS31200	0.50	+0.2
6,486,166	+		PFLU_RS31200	0.50	+0.4
6,486,166	+		PFLU_RS31200	0.50	+1.3
6,486,206	-		PFLU_RS31200	0.53	+3.0
6,486,307	+		PFLU_RS31200	0.61	+0.5
6,486,308	-		PFLU_RS31200	0.61	+0.8
6,486,319	+		PFLU_RS31200	0.62	-0.7
6,486,319	+		PFLU_RS31200	0.62	-0.4
6,486,320	-		PFLU_RS31200	0.62	+2.4
6,486,382	+		PFLU_RS31200	0.67	-0.5
6,486,383	-		PFLU_RS31200	0.67	+0.2