Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS27815

Experiment: Choline chloride 10 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline chloride 10 mM (C)
6,190,049	+		PFLU_RS27810	0.68	-1.6
6,190,049	+		PFLU_RS27810	0.68	-3.2
6,190,049	+		PFLU_RS27810	0.68	-2.9
6,190,049	+		PFLU_RS27810	0.68	-1.0
6,190,050	-		PFLU_RS27810	0.68	-2.2
6,190,050	-		PFLU_RS27810	0.68	-3.4
6,190,068	+		PFLU_RS27810	0.69	-1.0
6,190,068	+		PFLU_RS27810	0.69	-3.3
6,190,068	+		PFLU_RS27810	0.69	-3.0
6,190,068	+		PFLU_RS27810	0.69	-2.8
6,190,068	+		PFLU_RS27810	0.69	-2.4
6,190,068	+		PFLU_RS27810	0.69	-3.0
6,190,068	+		PFLU_RS27810	0.69	-1.0
6,190,069	-		PFLU_RS27810	0.69	-1.0
6,190,069	-		PFLU_RS27810	0.69	-2.7
6,190,069	-		PFLU_RS27810	0.69	+1.4
6,190,069	-		PFLU_RS27810	0.69	-2.7
6,190,069	-		PFLU_RS27810	0.69	-1.6
6,190,119	+		PFLU_RS27810	0.70	-1.6
6,190,119	+		PFLU_RS27810	0.70	-0.6
6,190,120	-		PFLU_RS27810	0.70	-3.2
6,190,184	-		PFLU_RS27810	0.72	-2.0
6,190,524	+		PFLU_RS27810	0.84	-1.6
6,190,524	+		PFLU_RS27810	0.84	-1.0
6,190,524	+		PFLU_RS27810	0.84	-2.8
6,190,524	+		PFLU_RS27810	0.84	-1.4
6,190,524	+		PFLU_RS27810	0.84	-3.4
6,190,525	-		PFLU_RS27810	0.84	-2.8
6,190,525	-		PFLU_RS27810	0.84	-3.6
6,190,525	-		PFLU_RS27810	0.84	-2.7
6,190,525	-		PFLU_RS27810	0.84	-2.7
6,190,581	+		PFLU_RS27810	0.86	+1.4
6,190,581	+		PFLU_RS27810	0.86	-2.4
6,190,581	+		PFLU_RS27810	0.86	-2.3
6,190,581	+		PFLU_RS27810	0.86	-2.5
6,190,581	+		PFLU_RS27810	0.86	-3.6
6,190,581	+		PFLU_RS27810	0.86	-2.3
6,190,581	+		PFLU_RS27810	0.86	-1.0
6,190,581	+		PFLU_RS27810	0.86	-2.0
6,190,582	-		PFLU_RS27810	0.86	-3.3
6,190,582	-		PFLU_RS27810	0.86	-2.5
6,190,582	-		PFLU_RS27810	0.86	-2.1
6,190,582	-		PFLU_RS27810	0.86	-3.3
6,190,582	-		PFLU_RS27810	0.86	-2.0
6,190,582	-		PFLU_RS27810	0.86	-3.3
6,190,582	-		PFLU_RS27810	0.86	-3.2
6,190,582	-		PFLU_RS27810	0.86	-2.6
6,190,582	-		PFLU_RS27810	0.86	-3.1
6,190,582	-		PFLU_RS27810	0.86	-2.6
6,190,582	-		PFLU_RS27810	0.86	-2.2
6,190,590	+		PFLU_RS27810	0.86	-2.1
6,190,591	-		PFLU_RS27810	0.86	-1.0
6,190,614	+		PFLU_RS27810	0.87	-1.4
6,190,614	+		PFLU_RS27810	0.87	-1.8
6,190,614	+		PFLU_RS27810	0.87	-0.2
6,190,614	+		PFLU_RS27810	0.87	-3.1
6,190,615	-		PFLU_RS27810	0.87	-1.1
6,190,615	-		PFLU_RS27810	0.87	-2.5
6,190,629	+		PFLU_RS27810	0.87	-1.4
6,190,629	+		PFLU_RS27810	0.87	-3.4
6,190,629	+		PFLU_RS27810	0.87	-3.5
6,190,629	+		PFLU_RS27810	0.87	-3.4
6,190,629	+		PFLU_RS27810	0.87	-1.0
6,190,629	+		PFLU_RS27810	0.87	-2.0
6,190,630	-		PFLU_RS27810	0.87	-3.1
6,190,630	-		PFLU_RS27810	0.87	-2.8
6,190,630	-		PFLU_RS27810	0.87	-2.3
6,190,630	-		PFLU_RS27810	0.87	-1.2
6,190,630	-		PFLU_RS27810	0.87	-2.9
6,190,632	+		PFLU_RS27810	0.87	-4.3
6,190,633	-		PFLU_RS27810	0.87	-2.8
6,190,633	-		PFLU_RS27810	0.87	-1.6
6,190,737	+				-2.3
6,190,737	+				-2.9
6,190,738	-				-1.2
6,190,854	+				-3.4
6,190,854	+				-4.1
6,190,854	+				-3.0
6,190,854	+				-1.4
6,190,855	-				-1.4
6,190,855	-				-1.8
6,190,932	+				-2.8
6,190,932	+				-0.2
6,190,932	+				-0.7
6,190,932	+				-3.6
6,190,932	+				-1.3
6,190,932	+				-2.7
6,190,932	+				-1.8
6,190,932	+				-2.3
6,190,932	+				-1.6
6,190,932	+				-3.1
6,190,933	-				-1.2
6,190,933	-				-3.7
6,190,933	-				-3.3
6,190,951	+				-1.4
6,190,951	+				-3.5
6,190,952	-				-1.0
6,190,966	+				+1.4
6,190,966	+				-1.8
6,190,966	+				-1.8
6,190,967	-				-2.8
6,190,967	-				-1.2
6,191,014	+				-3.2
6,191,014	+				-2.2
6,191,015	-				-2.0
6,191,015	-				-3.3
6,191,015	-				-2.8
6,191,015	-				-1.6
6,191,015	-				-1.2
6,191,015	-				-2.9
6,191,015	-				-2.5
6,191,066	+		PFLU_RS27815	0.18	-2.1
6,191,066	+		PFLU_RS27815	0.18	+0.8
6,191,067	-		PFLU_RS27815	0.18	-2.1
6,191,067	-		PFLU_RS27815	0.18	-2.4
6,191,067	-		PFLU_RS27815	0.18	-1.2
6,191,067	-		PFLU_RS27815	0.18	-2.5
6,191,067	-		PFLU_RS27815	0.18	-3.8
6,191,084	+		PFLU_RS27815	0.24	-2.2
6,191,085	-		PFLU_RS27815	0.24	-1.7
6,191,114	+		PFLU_RS27815	0.34	-2.9
6,191,115	-		PFLU_RS27815	0.34	-1.2
6,191,115	-		PFLU_RS27815	0.34	-1.9
6,191,186	+		PFLU_RS27815	0.58	-2.5
6,191,186	+		PFLU_RS27815	0.58	-2.6
6,191,186	+		PFLU_RS27815	0.58	-2.1
6,191,187	-		PFLU_RS27815	0.58	-1.6
6,191,187	-		PFLU_RS27815	0.58	-2.3
6,191,187	-		PFLU_RS27815	0.58	-1.0
6,191,187	-		PFLU_RS27815	0.58	-3.3
6,191,187	-		PFLU_RS27815	0.58	-3.0
6,191,187	-		PFLU_RS27815	0.58	-4.3
6,191,187	-		PFLU_RS27815	0.58	-2.8
6,191,187	-		PFLU_RS27815	0.58	-1.6
6,191,187	-		PFLU_RS27815	0.58	-3.0
6,191,187	-		PFLU_RS27815	0.58	-2.1
6,191,187	-		PFLU_RS27815	0.58	-0.6
6,191,187	-		PFLU_RS27815	0.58	-2.2
6,191,187	-		PFLU_RS27815	0.58	-0.6
6,191,304	+				-2.8
6,191,304	+				-0.6
6,191,304	+				-1.4
6,191,304	+				-1.8
6,191,304	+				-1.0
6,191,304	+				-1.6
6,191,304	+				-1.0
6,191,304	+				-2.3
6,191,304	+				-3.3
6,191,305	-				-3.1
6,191,305	-				-0.6
6,191,305	-				-1.4
6,191,305	-				-1.0
6,191,305	-				-2.9
6,191,305	-				-2.1
6,191,314	-				-2.2
6,191,314	-				-2.5
6,191,331	-				-0.0
6,191,331	-				-0.6
6,191,679	-		PFLU_RS27820	0.28	-3.0
6,191,679	-		PFLU_RS27820	0.28	+3.4
6,191,732	+		PFLU_RS27820	0.32	-2.5
6,191,732	+		PFLU_RS27820	0.32	-3.0
6,191,732	+		PFLU_RS27820	0.32	-2.9
6,191,732	+		PFLU_RS27820	0.32	-3.1
6,191,732	+		PFLU_RS27820	0.32	-1.2
6,191,732	+		PFLU_RS27820	0.32	-0.2
6,191,733	-		PFLU_RS27820	0.32	-2.0
6,191,733	-		PFLU_RS27820	0.32	-2.2
6,191,733	-		PFLU_RS27820	0.32	-2.7
6,191,733	-		PFLU_RS27820	0.32	-3.3
6,191,733	-		PFLU_RS27820	0.32	-1.8
6,191,733	-		PFLU_RS27820	0.32	-0.6
6,191,733	-		PFLU_RS27820	0.32	-2.2
6,191,733	-		PFLU_RS27820	0.32	-3.6
6,191,733	-		PFLU_RS27820	0.32	-2.2
6,191,733	-		PFLU_RS27820	0.32	-2.5
6,191,733	-		PFLU_RS27820	0.32	-1.4
6,191,733	-		PFLU_RS27820	0.32	-3.9
6,192,055	+		PFLU_RS27820	0.58	-1.6
6,192,055	+		PFLU_RS27820	0.58	-1.8
6,192,055	+		PFLU_RS27820	0.58	-2.7
6,192,055	+		PFLU_RS27820	0.58	-2.3
6,192,055	+		PFLU_RS27820	0.58	-2.1
6,192,055	+		PFLU_RS27820	0.58	-1.6
6,192,055	+		PFLU_RS27820	0.58	-2.2
6,192,056	-		PFLU_RS27820	0.58	-0.2
6,192,056	-		PFLU_RS27820	0.58	+1.4
6,192,056	-		PFLU_RS27820	0.58	-3.5
6,192,056	-		PFLU_RS27820	0.58	-3.8
6,192,056	-		PFLU_RS27820	0.58	-1.2
6,192,056	-		PFLU_RS27820	0.58	-1.4
6,192,056	-		PFLU_RS27820	0.58	-2.5
6,192,056	-		PFLU_RS27820	0.58	-0.2
6,192,056	-		PFLU_RS27820	0.58	-1.4
6,192,056	-		PFLU_RS27820	0.58	-2.1
6,192,056	-		PFLU_RS27820	0.58	-0.6
6,192,056	-		PFLU_RS27820	0.58	-0.6
6,192,056	-		PFLU_RS27820	0.58	-3.1
6,192,105	-		PFLU_RS27820	0.62	-3.4
6,192,224	+		PFLU_RS27820	0.72	-1.1
6,192,224	+		PFLU_RS27820	0.72	-1.2
6,192,225	-		PFLU_RS27820	0.72	+0.4
6,192,254	+		PFLU_RS27820	0.74	-3.0
6,192,254	+		PFLU_RS27820	0.74	-2.5
6,192,254	+		PFLU_RS27820	0.74	-2.1
6,192,254	+		PFLU_RS27820	0.74	-3.5
6,192,254	+		PFLU_RS27820	0.74	-2.7
6,192,254	+		PFLU_RS27820	0.74	-1.4
6,192,255	-		PFLU_RS27820	0.74	-2.3
6,192,255	-		PFLU_RS27820	0.74	-2.4
6,192,255	-		PFLU_RS27820	0.74	-1.8
6,192,255	-		PFLU_RS27820	0.74	-2.6
6,192,255	-		PFLU_RS27820	0.74	-1.8
6,192,255	-		PFLU_RS27820	0.74	-3.4
6,192,255	-		PFLU_RS27820	0.74	-0.6
6,192,255	-		PFLU_RS27820	0.74	-3.3