Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS21530

Experiment: Choline chloride 10 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline chloride 10 mM (C)
4,854,653	+				+0.1
4,854,653	+				-1.0
4,854,653	+				-0.5
4,854,653	+				-0.6
4,854,653	+				+2.2
4,854,653	+				+1.2
4,854,653	+				+1.6
4,854,653	+				-2.6
4,854,653	+				-0.9
4,854,653	+				-0.2
4,854,653	+				-2.2
4,854,654	-				+0.2
4,854,654	-				+0.8
4,854,654	-				+0.6
4,854,654	-				+0.7
4,854,654	-				-0.6
4,854,654	-				+2.3
4,854,654	-				+0.5
4,854,654	-				+1.0
4,854,654	-				+1.6
4,854,654	-				+1.0
4,854,654	-				-0.6
4,854,662	+				+1.4
4,854,663	-				+2.6
4,854,751	+				-1.0
4,854,751	+				+1.0
4,854,751	+				-0.1
4,854,751	+				+2.3
4,854,751	+				-1.6
4,854,751	+				-0.2
4,854,751	+				-0.0
4,854,751	+				-0.0
4,854,751	+				-2.2
4,854,751	+				+0.4
4,854,751	+				-0.1
4,854,752	-				-0.5
4,854,752	-				-0.7
4,854,752	-				-0.7
4,854,752	-				-2.3
4,854,752	-				-1.8
4,854,752	-				-0.8
4,854,755	+				+1.7
4,854,756	-				-2.2
4,854,803	+				-1.3
4,854,803	+				+1.0
4,854,803	+				-0.0
4,854,803	+				+0.4
4,854,804	-				+1.1
4,854,804	-				-0.5
4,854,804	-				-1.2
4,854,809	+				+0.3
4,854,809	+				-2.0
4,854,809	+				-1.4
4,854,809	+				+1.3
4,854,810	-				+0.5
4,854,867	+				+1.7
4,854,868	-				+2.2
4,854,937	+				-1.2
4,854,937	+				+2.4
4,854,937	+				+0.6
4,854,937	+				-2.1
4,854,937	+				-0.9
4,854,938	-				-0.2
4,854,938	-				+0.4
4,854,938	-				+1.0
4,854,938	-				-0.6
4,854,938	-				-0.4
4,854,938	-				+0.4
4,855,048	+		PFLU_RS21525	0.22	+0.2
4,855,048	+		PFLU_RS21525	0.22	+0.7
4,855,048	+		PFLU_RS21525	0.22	-0.1
4,855,048	+		PFLU_RS21525	0.22	-1.3
4,855,048	+		PFLU_RS21525	0.22	-0.0
4,855,048	+		PFLU_RS21525	0.22	+0.2
4,855,048	+		PFLU_RS21525	0.22	-0.3
4,855,048	+		PFLU_RS21525	0.22	-0.0
4,855,048	+		PFLU_RS21525	0.22	-1.0
4,855,048	+		PFLU_RS21525	0.22	-0.0
4,855,049	-		PFLU_RS21525	0.23	-1.3
4,855,049	-		PFLU_RS21525	0.23	-0.8
4,855,049	-		PFLU_RS21525	0.23	-0.6
4,855,049	-		PFLU_RS21525	0.23	+0.4
4,855,049	-		PFLU_RS21525	0.23	-0.1
4,855,049	-		PFLU_RS21525	0.23	+0.4
4,855,049	-		PFLU_RS21525	0.23	-0.1
4,855,049	-		PFLU_RS21525	0.23	+0.2
4,855,049	-		PFLU_RS21525	0.23	+0.8
4,855,062	+		PFLU_RS21525	0.25	-2.0
4,855,062	+		PFLU_RS21525	0.25	+1.0
4,855,063	-		PFLU_RS21525	0.25	-0.3
4,855,063	-		PFLU_RS21525	0.25	+0.5
4,855,063	-		PFLU_RS21525	0.25	-0.6
4,855,063	-		PFLU_RS21525	0.25	+0.5
4,855,063	-		PFLU_RS21525	0.25	-1.0
4,855,063	-		PFLU_RS21525	0.25	-0.3
4,855,119	+		PFLU_RS21525	0.35	+0.2
4,855,119	+		PFLU_RS21525	0.35	+0.6
4,855,119	+		PFLU_RS21525	0.35	-0.5
4,855,119	+		PFLU_RS21525	0.35	-0.6
4,855,119	+		PFLU_RS21525	0.35	+0.2
4,855,119	+		PFLU_RS21525	0.35	+1.0
4,855,119	+		PFLU_RS21525	0.35	-0.5
4,855,120	-		PFLU_RS21525	0.36	+0.9
4,855,120	-		PFLU_RS21525	0.36	+1.0
4,855,120	-		PFLU_RS21525	0.36	+0.9
4,855,120	-		PFLU_RS21525	0.36	-0.6
4,855,120	-		PFLU_RS21525	0.36	+1.0
4,855,120	-		PFLU_RS21525	0.36	-1.2
4,855,120	-		PFLU_RS21525	0.36	+0.8
4,855,120	-		PFLU_RS21525	0.36	+0.6
4,855,120	-		PFLU_RS21525	0.36	-0.3
4,855,120	-		PFLU_RS21525	0.36	-2.0
4,855,158	+		PFLU_RS21525	0.42	-0.6
4,855,185	+		PFLU_RS21525	0.47	+0.6
4,855,185	+		PFLU_RS21525	0.47	-0.0
4,855,186	-		PFLU_RS21525	0.47	+2.0
4,855,186	-		PFLU_RS21525	0.47	+0.4
4,855,186	-		PFLU_RS21525	0.47	+0.2
4,855,220	+		PFLU_RS21525	0.54	-1.0
4,855,220	+		PFLU_RS21525	0.54	-1.3
4,855,220	+		PFLU_RS21525	0.54	-0.3
4,855,221	-		PFLU_RS21525	0.54	+1.2
4,855,221	-		PFLU_RS21525	0.54	+0.2
4,855,253	+		PFLU_RS21525	0.60	-0.0
4,855,253	+		PFLU_RS21525	0.60	-1.5
4,855,253	+		PFLU_RS21525	0.60	-0.4
4,855,253	+		PFLU_RS21525	0.60	-1.5
4,855,263	-		PFLU_RS21525	0.61	-1.0
4,855,329	+		PFLU_RS21525	0.73	-1.0
4,855,330	-		PFLU_RS21525	0.74	+0.8
4,855,330	-		PFLU_RS21525	0.74	+1.3
4,855,330	-		PFLU_RS21525	0.74	+0.1
4,855,330	-		PFLU_RS21525	0.74	+2.4
4,855,330	-		PFLU_RS21525	0.74	+0.1
4,855,330	-		PFLU_RS21525	0.74	+0.7
4,855,330	-		PFLU_RS21525	0.74	-0.0
4,855,330	-		PFLU_RS21525	0.74	-1.4
4,855,448	+				+0.7
4,855,448	+				+1.4
4,855,454	+				+0.2
4,855,454	+				-0.6
4,855,454	+				-0.9
4,855,454	+				-0.9
4,855,454	+				+0.1
4,855,454	+				+0.2
4,855,455	-				+0.1
4,855,455	-				+0.2
4,855,455	-				-0.2
4,855,455	-				+0.5
4,855,455	-				-0.6
4,855,455	-				-1.8
4,855,502	-				+1.0
4,855,502	-				+0.5
4,855,502	-				+0.2
4,855,502	-				-0.4
4,855,502	-				+0.4
4,855,502	-				-0.0
4,855,502	-				-0.6
4,855,502	-				-0.6
4,855,502	-				-0.1
4,855,502	-				-0.4
4,855,502	-				+1.7
4,855,502	-				-0.0
4,855,502	-				-0.0
4,855,502	-				-0.4
4,855,502	-				-0.2
4,855,502	-				+2.3
4,855,502	-				+1.8
4,855,502	-				-2.5
4,855,566	-		PFLU_RS31750	0.35	-0.0
4,855,621	+		PFLU_RS31750	0.61	+0.9
4,855,621	+		PFLU_RS31750	0.61	+0.5
4,855,621	+		PFLU_RS31750	0.61	+0.4
4,855,621	+		PFLU_RS31750	0.61	-1.7
4,855,621	+		PFLU_RS31750	0.61	+0.1
4,855,622	-		PFLU_RS31750	0.62	+0.1
4,855,622	-		PFLU_RS31750	0.62	+0.2
4,855,622	-		PFLU_RS31750	0.62	+0.7
4,855,622	-		PFLU_RS31750	0.62	-1.0
4,855,622	-		PFLU_RS31750	0.62	+0.7
4,855,622	-		PFLU_RS31750	0.62	-1.7
4,855,622	-		PFLU_RS31750	0.62	-1.7
4,855,622	-		PFLU_RS31750	0.62	+0.5
4,855,622	-		PFLU_RS31750	0.62	-0.6
4,855,622	-		PFLU_RS31750	0.62	-1.2
4,855,622	-		PFLU_RS31750	0.62	+0.1
4,855,622	-		PFLU_RS31750	0.62	-0.8
4,855,757	+		PFLU_RS21530	0.16	-5.4
4,855,758	-		PFLU_RS21530	0.17	-4.4
4,855,766	+		PFLU_RS21530	0.18	-4.9
4,855,766	+		PFLU_RS21530	0.18	-6.0
4,855,766	+		PFLU_RS21530	0.18	-2.9
4,855,766	+		PFLU_RS21530	0.18	-4.4
4,855,766	+		PFLU_RS21530	0.18	-4.6
4,855,766	+		PFLU_RS21530	0.18	-5.9
4,855,767	-		PFLU_RS21530	0.18	-6.8
4,855,767	-		PFLU_RS21530	0.18	-5.0
4,855,767	-		PFLU_RS21530	0.18	-5.5
4,855,767	-		PFLU_RS21530	0.18	-4.6
4,855,767	-		PFLU_RS21530	0.18	-4.8
4,855,767	-		PFLU_RS21530	0.18	-5.6
4,855,767	-		PFLU_RS21530	0.18	-4.9
4,855,827	+		PFLU_RS21530	0.25	-4.3
4,855,827	+		PFLU_RS21530	0.25	-4.4
4,855,827	+		PFLU_RS21530	0.25	-3.8
4,855,828	-		PFLU_RS21530	0.25	-4.2
4,855,828	-		PFLU_RS21530	0.25	-4.6
4,855,828	-		PFLU_RS21530	0.25	-5.7
4,855,828	-		PFLU_RS21530	0.25	-5.4
4,855,841	+		PFLU_RS21530	0.27	-5.1
4,855,841	+		PFLU_RS21530	0.27	-5.4
4,855,841	+		PFLU_RS21530	0.27	-3.2
4,855,842	-		PFLU_RS21530	0.27	-5.4
4,855,842	-		PFLU_RS21530	0.27	-5.2
4,855,842	-		PFLU_RS21530	0.27	-5.4
4,855,910	+		PFLU_RS21530	0.36	-5.0
4,855,910	+		PFLU_RS21530	0.36	-5.7
4,855,910	+		PFLU_RS21530	0.36	-4.8
4,855,910	+		PFLU_RS21530	0.36	-5.3
4,855,910	+		PFLU_RS21530	0.36	-4.9
4,855,910	+		PFLU_RS21530	0.36	-5.4
4,855,910	+		PFLU_RS21530	0.36	-3.5
4,855,910	+		PFLU_RS21530	0.36	-5.2
4,855,910	+		PFLU_RS21530	0.36	-6.3
4,855,910	+		PFLU_RS21530	0.36	-4.3
4,855,910	+		PFLU_RS21530	0.36	-5.1
4,855,911	-		PFLU_RS21530	0.36	-5.2
4,855,911	-		PFLU_RS21530	0.36	-4.2
4,855,911	-		PFLU_RS21530	0.36	-4.8
4,855,911	-		PFLU_RS21530	0.36	-5.8
4,855,911	-		PFLU_RS21530	0.36	-5.2
4,855,911	-		PFLU_RS21530	0.36	-5.2
4,855,911	-		PFLU_RS21530	0.36	-4.3
4,855,911	-		PFLU_RS21530	0.36	-5.0
4,855,943	+		PFLU_RS21530	0.40	-4.4
4,855,943	+		PFLU_RS21530	0.40	-5.9
4,855,943	+		PFLU_RS21530	0.40	-5.4
4,855,943	+		PFLU_RS21530	0.40	-3.6
4,855,943	+		PFLU_RS21530	0.40	-7.3
4,855,943	+		PFLU_RS21530	0.40	-5.5
4,855,943	+		PFLU_RS21530	0.40	-5.1
4,855,943	+		PFLU_RS21530	0.40	-5.4
4,855,943	+		PFLU_RS21530	0.40	-3.6
4,855,943	+		PFLU_RS21530	0.40	-5.2
4,855,943	+		PFLU_RS21530	0.40	-4.9
4,855,943	+		PFLU_RS21530	0.40	-4.7
4,855,943	+		PFLU_RS21530	0.40	-4.5
4,855,943	+		PFLU_RS21530	0.40	-5.0
4,855,943	+		PFLU_RS21530	0.40	-4.9
4,855,943	+		PFLU_RS21530	0.40	-4.8
4,855,943	+		PFLU_RS21530	0.40	-5.8
4,855,943	+		PFLU_RS21530	0.40	-5.6
4,855,943	+		PFLU_RS21530	0.40	-5.6
4,855,943	+		PFLU_RS21530	0.40	-6.0
4,855,943	+		PFLU_RS21530	0.40	-4.8
4,855,944	-		PFLU_RS21530	0.40	-5.0
4,855,944	-		PFLU_RS21530	0.40	-6.5
4,855,944	-		PFLU_RS21530	0.40	-5.7
4,855,944	-		PFLU_RS21530	0.40	-4.9
4,855,944	-		PFLU_RS21530	0.40	-5.0
4,855,944	-		PFLU_RS21530	0.40	-4.9
4,855,944	-		PFLU_RS21530	0.40	-3.7
4,855,944	-		PFLU_RS21530	0.40	-5.8
4,855,944	-		PFLU_RS21530	0.40	-5.6
4,855,944	-		PFLU_RS21530	0.40	-5.1
4,855,944	-		PFLU_RS21530	0.40	-5.6
4,855,944	-		PFLU_RS21530	0.40	-5.3
4,855,944	-		PFLU_RS21530	0.40	-4.9
4,855,944	-		PFLU_RS21530	0.40	-6.7
4,855,944	-		PFLU_RS21530	0.40	-2.8
4,855,944	-		PFLU_RS21530	0.40	-4.6
4,855,944	-		PFLU_RS21530	0.40	-5.7
4,855,944	-		PFLU_RS21530	0.40	-4.6
4,855,944	-		PFLU_RS21530	0.40	-4.8
4,855,944	-		PFLU_RS21530	0.40	-5.2
4,855,944	-		PFLU_RS21530	0.40	-4.4
4,855,944	-		PFLU_RS21530	0.40	-5.4
4,855,976	+		PFLU_RS21530	0.44	-4.2
4,855,977	-		PFLU_RS21530	0.44	-4.5
4,855,977	-		PFLU_RS21530	0.44	-4.2
4,855,983	-		PFLU_RS21530	0.45	-8.6
4,856,027	+		PFLU_RS21530	0.51	-4.4
4,856,028	-		PFLU_RS21530	0.51	-5.1
4,856,142	+		PFLU_RS21530	0.65	-2.7
4,856,142	+		PFLU_RS21530	0.65	-3.6
4,856,142	+		PFLU_RS21530	0.65	-4.7
4,856,142	+		PFLU_RS21530	0.65	-5.2
4,856,142	+		PFLU_RS21530	0.65	-4.3
4,856,143	-		PFLU_RS21530	0.65	-4.9
4,856,143	-		PFLU_RS21530	0.65	-4.7
4,856,143	-		PFLU_RS21530	0.65	-5.5
4,856,143	-		PFLU_RS21530	0.65	-4.4
4,856,143	-		PFLU_RS21530	0.65	-2.5
4,856,216	+		PFLU_RS21530	0.75	-4.4
4,856,216	+		PFLU_RS21530	0.75	-6.1
4,856,217	-		PFLU_RS21530	0.75	-4.2
4,856,297	+		PFLU_RS21530	0.85	-2.8
4,856,297	+		PFLU_RS21530	0.85	-2.2
4,856,297	+		PFLU_RS21530	0.85	-3.6
4,856,297	+		PFLU_RS21530	0.85	-4.1
4,856,297	+		PFLU_RS21530	0.85	-4.4
4,856,298	-		PFLU_RS21530	0.85	-4.0
4,856,298	-		PFLU_RS21530	0.85	-4.6
4,856,298	-		PFLU_RS21530	0.85	-5.8
4,856,298	-		PFLU_RS21530	0.85	-5.6
4,856,382	+				-2.8
4,856,382	+				-5.1
4,856,382	+				-4.6
4,856,382	+				-4.3
4,856,382	+				-4.0
4,856,383	-				-6.1
4,856,383	-				-5.8
4,856,383	-				-4.2
4,856,383	-				-3.4
4,856,383	-				-6.0
4,856,383	-				-4.1
4,856,441	+				-4.0
4,856,450	+				-3.6
4,856,450	+				-4.5
4,856,455	+				-2.9
4,856,455	+				-4.2
4,856,456	-				-1.3
4,856,456	-				+1.1
4,856,456	-				-0.2
4,856,499	+				+0.8
4,856,499	+				-2.3
4,856,499	+				+0.0
4,856,499	+				+0.7
4,856,500	-				+0.7
4,856,632	+		PFLU_RS21535	0.20	-0.6
4,856,633	-		PFLU_RS21535	0.20	+0.6
4,856,652	+		PFLU_RS21535	0.23	-0.2
4,856,652	+		PFLU_RS21535	0.23	-0.2
4,856,652	+		PFLU_RS21535	0.23	-0.6
4,856,652	+		PFLU_RS21535	0.23	-0.8
4,856,652	+		PFLU_RS21535	0.23	+0.8
4,856,652	+		PFLU_RS21535	0.23	+0.7
4,856,652	+		PFLU_RS21535	0.23	-0.3
4,856,653	-		PFLU_RS21535	0.23	-0.4
4,856,653	-		PFLU_RS21535	0.23	-0.8
4,856,678	+		PFLU_RS21535	0.27	-0.0
4,856,678	+		PFLU_RS21535	0.27	-1.4
4,856,678	+		PFLU_RS21535	0.27	+1.0
4,856,678	+		PFLU_RS21535	0.27	+0.6
4,856,679	-		PFLU_RS21535	0.27	-0.4
4,856,700	+		PFLU_RS21535	0.30	-0.6
4,856,700	+		PFLU_RS21535	0.30	-1.8
4,856,700	+		PFLU_RS21535	0.30	+1.0
4,856,700	+		PFLU_RS21535	0.30	+1.2
4,856,700	+		PFLU_RS21535	0.30	+1.7
4,856,700	+		PFLU_RS21535	0.30	-0.6
4,856,700	+		PFLU_RS21535	0.30	-2.0
4,856,700	+		PFLU_RS21535	0.30	-1.3
4,856,700	+		PFLU_RS21535	0.30	-1.2
4,856,700	+		PFLU_RS21535	0.30	-1.7
4,856,700	+		PFLU_RS21535	0.30	-1.3
4,856,700	+		PFLU_RS21535	0.30	-0.2
4,856,701	-		PFLU_RS21535	0.31	-1.0
4,856,701	-		PFLU_RS21535	0.31	-0.4
4,856,701	-		PFLU_RS21535	0.31	+0.6
4,856,701	-		PFLU_RS21535	0.31	+1.3
4,856,701	-		PFLU_RS21535	0.31	-0.3
4,856,701	-		PFLU_RS21535	0.31	-1.0
4,856,701	-		PFLU_RS21535	0.31	-0.7
4,856,701	-		PFLU_RS21535	0.31	+0.8
4,856,701	-		PFLU_RS21535	0.31	-0.6
4,856,701	-		PFLU_RS21535	0.31	+0.8
4,856,701	-		PFLU_RS21535	0.31	+1.2
4,856,701	-		PFLU_RS21535	0.31	+0.8
4,856,760	+		PFLU_RS21535	0.40	-2.2
4,856,761	-		PFLU_RS21535	0.40	+1.3
4,856,889	+		PFLU_RS21535	0.61	+0.4
4,856,889	+		PFLU_RS21535	0.61	-1.3
4,856,889	+		PFLU_RS21535	0.61	+0.5
4,856,889	+		PFLU_RS21535	0.61	+1.2
4,856,889	+		PFLU_RS21535	0.61	-2.2
4,856,889	+		PFLU_RS21535	0.61	-0.9
4,856,889	+		PFLU_RS21535	0.61	+0.7
4,856,889	+		PFLU_RS21535	0.61	-0.6
4,856,889	+		PFLU_RS21535	0.61	-0.2
4,856,889	+		PFLU_RS21535	0.61	-1.2
4,856,890	-		PFLU_RS21535	0.61	-0.2
4,856,890	-		PFLU_RS21535	0.61	+0.2
4,856,890	-		PFLU_RS21535	0.61	+1.0
4,856,890	-		PFLU_RS21535	0.61	+0.9
4,856,890	-		PFLU_RS21535	0.61	+0.4
4,856,890	-		PFLU_RS21535	0.61	-0.6
4,856,890	-		PFLU_RS21535	0.61	-2.0
4,857,146	+				-0.4
4,857,146	+				+0.5
4,857,146	+				-0.4
4,857,146	+				+0.1
4,857,147	-				+2.6
4,857,147	-				+0.3
4,857,147	-				+1.0
4,857,175	+				+0.6
4,857,176	-				-1.8
4,857,361	-				+0.2
4,857,380	+				+0.9
4,857,380	+				+0.1
4,857,381	-				+1.3
4,857,381	-				+0.3