Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS06430

Experiment: Choline chloride 10 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline chloride 10 mM (C)
1,438,559	+				+0.1
1,438,560	-				+0.5
1,438,560	-				-2.6
1,438,560	-				-2.8
1,438,560	-				-0.5
1,438,560	-				+0.1
1,438,573	+				+0.5
1,438,573	+				-0.1
1,438,573	+				+1.6
1,438,639	+				-0.5
1,438,639	+				+1.0
1,438,639	+				+0.1
1,438,639	+				-1.6
1,438,639	+				+0.9
1,438,639	+				+1.8
1,438,639	+				-0.6
1,438,639	+				+0.3
1,438,639	+				+2.1
1,438,639	+				-0.4
1,438,639	+				-0.6
1,438,639	+				+0.5
1,438,639	+				+0.3
1,438,639	+				-0.7
1,438,640	-				+0.3
1,438,640	-				-3.0
1,438,640	-				+0.1
1,439,476	+				-0.9
1,439,476	+				-2.4
1,439,477	-				-6.9
1,439,477	-				-4.1
1,439,549	+				-5.6
1,439,549	+				-5.6
1,439,549	+				-6.7
1,439,549	+				-5.0
1,439,549	+				-5.5
1,439,549	+				-5.6
1,439,549	+				-5.8
1,439,549	+				-7.4
1,439,549	+				-6.1
1,439,549	+				-5.1
1,439,549	+				-7.7
1,439,550	-				-5.7
1,439,550	-				-4.3
1,439,550	-				-7.0
1,439,550	-				-6.4
1,439,550	-				-5.9
1,439,550	-				-5.5
1,439,550	-				-5.8
1,439,550	-				-8.4
1,439,550	-				-5.5
1,439,550	-				-4.9
1,439,551	+				-5.2
1,439,551	+				-4.9
1,439,551	+				-5.7
1,439,551	+				-7.5
1,439,551	+				-6.3
1,439,551	+				-6.1
1,439,551	+				-5.6
1,439,551	+				-5.8
1,439,551	+				-4.6
1,439,551	+				-3.9
1,439,551	+				-5.9
1,439,551	+				-5.4
1,439,551	+				-8.4
1,439,552	-				-4.1
1,439,552	-				-3.3
1,439,552	-				-5.8
1,439,552	-				-5.0
1,439,552	-				-6.0
1,439,552	-				-5.4
1,439,552	-				-4.8
1,439,552	-				-3.8
1,439,552	-				-6.9
1,439,552	-				-6.5
1,439,567	+				-5.1
1,439,568	-				-5.7
1,439,659	+		PFLU_RS06430	0.10	-8.8
1,439,659	+		PFLU_RS06430	0.10	-5.9
1,439,659	+		PFLU_RS06430	0.10	-5.7
1,439,659	+		PFLU_RS06430	0.10	-5.0
1,439,659	+		PFLU_RS06430	0.10	-6.3
1,439,659	+		PFLU_RS06430	0.10	-6.2
1,439,660	-		PFLU_RS06430	0.10	-4.6
1,439,660	-		PFLU_RS06430	0.10	-4.9
1,439,660	-		PFLU_RS06430	0.10	-7.1
1,439,712	+		PFLU_RS06430	0.16	-5.4
1,439,712	+		PFLU_RS06430	0.16	-5.0
1,439,712	+		PFLU_RS06430	0.16	-6.0
1,439,712	+		PFLU_RS06430	0.16	-3.9
1,439,712	+		PFLU_RS06430	0.16	-6.1
1,439,712	+		PFLU_RS06430	0.16	-4.0
1,439,712	+		PFLU_RS06430	0.16	-4.9
1,439,712	+		PFLU_RS06430	0.16	-5.7
1,439,712	+		PFLU_RS06430	0.16	-5.6
1,439,712	+		PFLU_RS06430	0.16	-4.6
1,439,712	+		PFLU_RS06430	0.16	-4.1
1,439,713	-		PFLU_RS06430	0.16	-5.5
1,439,713	-		PFLU_RS06430	0.16	-4.5
1,439,713	-		PFLU_RS06430	0.16	-7.2
1,439,713	-		PFLU_RS06430	0.16	-5.0
1,439,713	-		PFLU_RS06430	0.16	-6.8
1,439,713	-		PFLU_RS06430	0.16	-5.7
1,439,713	-		PFLU_RS06430	0.16	-5.0
1,439,713	-		PFLU_RS06430	0.16	-5.5
1,439,713	-		PFLU_RS06430	0.16	-3.9
1,439,713	-		PFLU_RS06430	0.16	-6.7
1,439,713	-		PFLU_RS06430	0.16	-3.3
1,439,713	-		PFLU_RS06430	0.16	-6.0
1,439,713	-		PFLU_RS06430	0.16	-4.2
1,439,721	+		PFLU_RS06430	0.16	-5.4
1,439,721	+		PFLU_RS06430	0.16	-5.8
1,439,721	+		PFLU_RS06430	0.16	-5.5
1,439,721	+		PFLU_RS06430	0.16	-4.7
1,439,721	+		PFLU_RS06430	0.16	-6.1
1,439,721	+		PFLU_RS06430	0.16	-3.0
1,439,721	+		PFLU_RS06430	0.16	-6.6
1,439,722	-		PFLU_RS06430	0.17	-3.6
1,439,722	-		PFLU_RS06430	0.17	-5.5
1,439,751	+		PFLU_RS06430	0.19	-5.9
1,439,751	+		PFLU_RS06430	0.19	-5.4
1,439,751	+		PFLU_RS06430	0.19	-5.7
1,439,751	+		PFLU_RS06430	0.19	-5.8
1,439,752	-		PFLU_RS06430	0.20	-3.9
1,439,752	-		PFLU_RS06430	0.20	-4.7
1,439,752	-		PFLU_RS06430	0.20	-5.9
1,439,752	-		PFLU_RS06430	0.20	-6.2
1,439,752	-		PFLU_RS06430	0.20	-3.7
1,439,895	+		PFLU_RS06430	0.34	-4.6
1,439,895	+		PFLU_RS06430	0.34	-5.9
1,439,896	-		PFLU_RS06430	0.34	-5.2
1,439,896	-		PFLU_RS06430	0.34	-4.4
1,439,896	-		PFLU_RS06430	0.34	-5.3
1,439,896	-		PFLU_RS06430	0.34	-5.6
1,439,896	-		PFLU_RS06430	0.34	-6.8
1,439,896	-		PFLU_RS06430	0.34	-6.5
1,439,896	-		PFLU_RS06430	0.34	-5.1
1,439,896	-		PFLU_RS06430	0.34	-5.4
1,439,896	-		PFLU_RS06430	0.34	-6.8
1,439,896	-		PFLU_RS06430	0.34	-4.9
1,439,896	-		PFLU_RS06430	0.34	-6.4
1,440,003	+		PFLU_RS06430	0.44	-7.8
1,440,003	+		PFLU_RS06430	0.44	-8.4
1,440,003	+		PFLU_RS06430	0.44	-3.8
1,440,003	+		PFLU_RS06430	0.44	-5.2
1,440,003	+		PFLU_RS06430	0.44	-5.6
1,440,003	+		PFLU_RS06430	0.44	-4.5
1,440,003	+		PFLU_RS06430	0.44	-5.2
1,440,003	+		PFLU_RS06430	0.44	-4.0
1,440,003	+		PFLU_RS06430	0.44	-4.5
1,440,003	+		PFLU_RS06430	0.44	-4.7
1,440,003	+		PFLU_RS06430	0.44	-5.1
1,440,003	+		PFLU_RS06430	0.44	-6.0
1,440,004	-		PFLU_RS06430	0.45	-7.5
1,440,004	-		PFLU_RS06430	0.45	-6.1
1,440,004	-		PFLU_RS06430	0.45	-4.7
1,440,004	-		PFLU_RS06430	0.45	-5.1
1,440,004	-		PFLU_RS06430	0.45	-3.8
1,440,004	-		PFLU_RS06430	0.45	-5.0
1,440,004	-		PFLU_RS06430	0.45	-4.9
1,440,095	+		PFLU_RS06430	0.54	-6.7
1,440,095	+		PFLU_RS06430	0.54	-5.9
1,440,096	-		PFLU_RS06430	0.54	-4.2
1,440,096	-		PFLU_RS06430	0.54	-5.1
1,440,102	+		PFLU_RS06430	0.54	-6.1
1,440,103	-		PFLU_RS06430	0.54	-4.1
1,440,103	-		PFLU_RS06430	0.54	-3.9
1,440,103	-		PFLU_RS06430	0.54	-5.3
1,440,299	+		PFLU_RS06430	0.74	-7.0
1,440,442	+		PFLU_RS06430	0.88	-7.3
1,440,442	+		PFLU_RS06430	0.88	-5.7
1,440,442	+		PFLU_RS06430	0.88	-4.4
1,440,442	+		PFLU_RS06430	0.88	-5.5
1,440,442	+		PFLU_RS06430	0.88	-5.3
1,440,443	-		PFLU_RS06430	0.88	-3.9
1,440,443	-		PFLU_RS06430	0.88	-5.1
1,440,443	-		PFLU_RS06430	0.88	-6.1
1,440,443	-		PFLU_RS06430	0.88	-4.9
1,440,443	-		PFLU_RS06430	0.88	-4.5
1,440,443	-		PFLU_RS06430	0.88	-6.2
1,440,443	-		PFLU_RS06430	0.88	-5.3
1,440,443	-		PFLU_RS06430	0.88	-5.0
1,440,558	+				+0.7
1,440,559	-				-2.4
1,440,625	+				+0.1
1,440,625	+				+0.9
1,440,625	+				-1.0
1,440,626	-				+0.3
1,440,626	-				+0.0
1,440,626	-				+1.7
1,440,626	-				-2.6
1,440,626	-				-1.2
1,440,626	-				-0.9
1,440,626	-				-0.9
1,440,626	-				+1.0
1,440,626	-				-1.8
1,440,626	-				+0.2
1,440,626	-				+1.4
1,440,626	-				+0.7
1,440,626	-				-0.2
1,440,688	+				+0.1
1,440,689	-				-0.3
1,440,689	-				-1.3
1,440,691	+				-1.3
1,440,692	-				+0.9
1,440,707	+				-1.5
1,440,708	-				+1.1
1,440,746	-				+0.9
1,440,753	+				+1.6
1,440,754	-				-1.0
1,440,754	-				-0.5
1,440,754	-				+0.6
1,440,754	-				-1.1
1,440,754	-				+0.1
1,440,761	-				-0.3
1,440,761	-				-0.9
1,440,765	-				-1.2
1,440,765	-				+0.2
1,440,765	-				-0.3
1,440,765	-				+0.2
1,440,765	-				-2.0
1,440,963	-				-1.0
1,440,963	-				-0.4
1,440,973	+				-1.9
1,440,973	+				-0.9
1,440,974	-				-1.2
1,440,974	-				-3.5
1,440,974	-				-0.0
1,440,974	-				+0.3
1,440,974	-				-0.9
1,440,974	-				+0.1
1,441,077	+				-1.7
1,441,077	+				-0.9
1,441,077	+				+0.3
1,441,077	+				-0.2
1,441,078	-				-0.9
1,441,078	-				+1.5
1,441,078	-				-0.1
1,441,078	-				-0.5
1,441,078	-				-2.0
1,441,078	-				-0.2
1,441,078	-				+0.1
1,441,078	-				-2.1
1,441,078	-				-1.7
1,441,078	-				+0.2
1,441,078	-				+0.8
1,441,078	-				+1.1
1,441,153	+				+0.8
1,441,153	+				-1.0
1,441,153	+				-1.3
1,441,153	+				-0.5
1,441,154	-				-2.2
1,441,154	-				-1.0
1,441,154	-				-0.1
1,441,154	-				-0.6
1,441,154	-				-1.3
1,441,217	+				+1.5
1,441,217	+				+1.9
1,441,217	+				+1.4
1,441,217	+				+2.7
1,441,217	+				-0.0
1,441,217	+				-1.3
1,441,217	+				+1.1
1,441,218	-				-1.6
1,441,218	-				+0.2
1,441,218	-				+1.5
1,441,221	-				-0.6
1,441,247	-				-0.1
1,441,247	-				-0.4
1,441,248	+				-0.0
1,441,248	+				+3.4
1,441,249	-				+1.9
1,441,326	-				-0.9