Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS06005

Experiment: Choline chloride 10 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline chloride 10 mM (C)
1,342,882	+		PFLU_RS06000	0.21	-0.9
1,342,882	+		PFLU_RS06000	0.21	+0.0
1,342,883	-		PFLU_RS06000	0.22	+2.5
1,343,077	+		PFLU_RS06000	0.38	-1.0
1,343,128	+		PFLU_RS06000	0.43	-1.5
1,343,128	+		PFLU_RS06000	0.43	-1.0
1,343,129	-		PFLU_RS06000	0.43	+0.2
1,343,129	-		PFLU_RS06000	0.43	+0.9
1,343,129	-		PFLU_RS06000	0.43	+0.9
1,343,129	-		PFLU_RS06000	0.43	-0.3
1,343,129	-		PFLU_RS06000	0.43	+0.2
1,343,129	-		PFLU_RS06000	0.43	-0.2
1,343,186	+		PFLU_RS06000	0.48	-0.4
1,343,186	+		PFLU_RS06000	0.48	+2.2
1,343,186	+		PFLU_RS06000	0.48	-1.4
1,343,186	+		PFLU_RS06000	0.48	+1.2
1,343,186	+		PFLU_RS06000	0.48	-0.6
1,343,186	+		PFLU_RS06000	0.48	-0.4
1,343,187	-		PFLU_RS06000	0.48	-0.3
1,343,187	-		PFLU_RS06000	0.48	-0.4
1,343,187	-		PFLU_RS06000	0.48	-0.7
1,343,187	-		PFLU_RS06000	0.48	-1.5
1,343,187	-		PFLU_RS06000	0.48	+2.2
1,343,187	-		PFLU_RS06000	0.48	+0.1
1,343,187	-		PFLU_RS06000	0.48	-0.4
1,343,191	+		PFLU_RS06000	0.48	+3.2
1,343,191	+		PFLU_RS06000	0.48	+0.2
1,343,191	+		PFLU_RS06000	0.48	-0.2
1,343,191	+		PFLU_RS06000	0.48	+0.2
1,343,191	+		PFLU_RS06000	0.48	+0.5
1,343,192	-		PFLU_RS06000	0.48	-0.7
1,343,192	-		PFLU_RS06000	0.48	-2.5
1,343,192	-		PFLU_RS06000	0.48	+1.2
1,343,192	-		PFLU_RS06000	0.48	+0.7
1,343,192	-		PFLU_RS06000	0.48	-1.2
1,343,192	-		PFLU_RS06000	0.48	-1.0
1,343,192	-		PFLU_RS06000	0.48	+1.2
1,343,212	+		PFLU_RS06000	0.50	-0.7
1,343,212	+		PFLU_RS06000	0.50	+0.3
1,343,212	+		PFLU_RS06000	0.50	+0.4
1,343,212	+		PFLU_RS06000	0.50	-0.4
1,343,212	+		PFLU_RS06000	0.50	-0.3
1,343,213	-		PFLU_RS06000	0.50	+0.2
1,343,213	-		PFLU_RS06000	0.50	-3.2
1,343,213	-		PFLU_RS06000	0.50	-0.2
1,343,213	-		PFLU_RS06000	0.50	-1.2
1,343,213	-		PFLU_RS06000	0.50	-1.4
1,343,213	-		PFLU_RS06000	0.50	+0.2
1,343,213	-		PFLU_RS06000	0.50	-1.7
1,343,213	-		PFLU_RS06000	0.50	-0.7
1,343,227	+		PFLU_RS06000	0.51	-0.1
1,343,227	+		PFLU_RS06000	0.51	-0.4
1,343,227	+		PFLU_RS06000	0.51	-0.7
1,343,228	-		PFLU_RS06000	0.51	-0.0
1,343,228	-		PFLU_RS06000	0.51	-0.5
1,343,228	-		PFLU_RS06000	0.51	+0.9
1,343,228	-		PFLU_RS06000	0.51	+0.3
1,343,228	-		PFLU_RS06000	0.51	-0.4
1,343,329	+		PFLU_RS06000	0.60	+0.6
1,343,329	+		PFLU_RS06000	0.60	-1.1
1,343,329	+		PFLU_RS06000	0.60	-0.1
1,343,329	+		PFLU_RS06000	0.60	-0.3
1,343,329	+		PFLU_RS06000	0.60	-0.4
1,343,329	+		PFLU_RS06000	0.60	+0.6
1,343,329	+		PFLU_RS06000	0.60	-0.8
1,343,329	+		PFLU_RS06000	0.60	-1.8
1,343,329	+		PFLU_RS06000	0.60	+0.7
1,343,330	-		PFLU_RS06000	0.60	-1.5
1,343,330	-		PFLU_RS06000	0.60	+1.5
1,343,330	-		PFLU_RS06000	0.60	+0.2
1,343,330	-		PFLU_RS06000	0.60	+1.1
1,343,330	-		PFLU_RS06000	0.60	-0.4
1,343,330	-		PFLU_RS06000	0.60	-1.9
1,343,330	-		PFLU_RS06000	0.60	-0.0
1,343,330	-		PFLU_RS06000	0.60	-0.8
1,343,330	-		PFLU_RS06000	0.60	+0.7
1,343,368	+		PFLU_RS06000	0.64	-0.3
1,343,368	+		PFLU_RS06000	0.64	-1.3
1,343,368	+		PFLU_RS06000	0.64	-1.8
1,343,368	+		PFLU_RS06000	0.64	+1.1
1,343,368	+		PFLU_RS06000	0.64	-2.2
1,343,369	-		PFLU_RS06000	0.64	+0.2
1,343,369	-		PFLU_RS06000	0.64	+1.2
1,343,369	-		PFLU_RS06000	0.64	-2.2
1,343,389	+		PFLU_RS06000	0.65	-0.8
1,343,389	+		PFLU_RS06000	0.65	-1.1
1,343,389	+		PFLU_RS06000	0.65	-1.4
1,343,390	-		PFLU_RS06000	0.66	+1.2
1,343,620	+		PFLU_RS06000	0.86	-1.0
1,343,620	+		PFLU_RS06000	0.86	+1.2
1,343,620	+		PFLU_RS06000	0.86	+0.7
1,343,620	+		PFLU_RS06000	0.86	-1.0
1,343,620	+		PFLU_RS06000	0.86	+0.2
1,343,621	-		PFLU_RS06000	0.86	+0.7
1,343,646	+		PFLU_RS06000	0.88	-1.5
1,343,646	+		PFLU_RS06000	0.88	-0.4
1,343,646	+		PFLU_RS06000	0.88	-0.4
1,343,646	+		PFLU_RS06000	0.88	-1.2
1,343,646	+		PFLU_RS06000	0.88	-0.4
1,343,646	+		PFLU_RS06000	0.88	-1.7
1,343,646	+		PFLU_RS06000	0.88	-0.2
1,343,646	+		PFLU_RS06000	0.88	-0.4
1,343,646	+		PFLU_RS06000	0.88	-0.6
1,343,646	+		PFLU_RS06000	0.88	+0.3
1,343,646	+		PFLU_RS06000	0.88	-0.5
1,343,646	+		PFLU_RS06000	0.88	-1.8
1,343,646	+		PFLU_RS06000	0.88	+0.8
1,343,646	+		PFLU_RS06000	0.88	-1.8
1,343,646	+		PFLU_RS06000	0.88	+1.1
1,343,646	+		PFLU_RS06000	0.88	-0.8
1,343,646	+		PFLU_RS06000	0.88	+1.2
1,343,646	+		PFLU_RS06000	0.88	-0.5
1,343,646	+		PFLU_RS06000	0.88	+1.2
1,343,646	+		PFLU_RS06000	0.88	+1.2
1,343,646	+		PFLU_RS06000	0.88	+1.6
1,343,646	+		PFLU_RS06000	0.88	-1.4
1,343,646	+		PFLU_RS06000	0.88	-0.8
1,343,646	+		PFLU_RS06000	0.88	-1.1
1,343,646	+		PFLU_RS06000	0.88	-0.7
1,343,646	+		PFLU_RS06000	0.88	-0.4
1,343,647	-		PFLU_RS06000	0.88	+0.9
1,343,647	-		PFLU_RS06000	0.88	+0.7
1,343,647	-		PFLU_RS06000	0.88	+0.0
1,343,647	-		PFLU_RS06000	0.88	+1.5
1,343,647	-		PFLU_RS06000	0.88	+0.5
1,343,647	-		PFLU_RS06000	0.88	+1.5
1,343,647	-		PFLU_RS06000	0.88	+0.4
1,343,647	-		PFLU_RS06000	0.88	+1.0
1,343,647	-		PFLU_RS06000	0.88	+0.2
1,343,647	-		PFLU_RS06000	0.88	+0.0
1,343,647	-		PFLU_RS06000	0.88	+0.6
1,343,647	-		PFLU_RS06000	0.88	-1.2
1,343,647	-		PFLU_RS06000	0.88	-1.1
1,343,647	-		PFLU_RS06000	0.88	-0.8
1,343,647	-		PFLU_RS06000	0.88	+0.2
1,343,647	-		PFLU_RS06000	0.88	+0.2
1,343,647	-		PFLU_RS06000	0.88	-0.5
1,343,647	-		PFLU_RS06000	0.88	+1.0
1,343,647	-		PFLU_RS06000	0.88	+0.1
1,343,647	-		PFLU_RS06000	0.88	+0.2
1,343,647	-		PFLU_RS06000	0.88	-0.8
1,343,647	-		PFLU_RS06000	0.88	-1.0
1,343,647	-		PFLU_RS06000	0.88	+0.6
1,343,647	-		PFLU_RS06000	0.88	-0.1
1,343,647	-		PFLU_RS06000	0.88	-0.1
1,343,647	-		PFLU_RS06000	0.88	-1.1
1,343,647	-		PFLU_RS06000	0.88	+1.2
1,343,648	+		PFLU_RS06000	0.88	+0.6
1,343,648	+		PFLU_RS06000	0.88	-0.4
1,343,648	+		PFLU_RS06000	0.88	-0.3
1,343,648	+		PFLU_RS06000	0.88	+1.6
1,343,648	+		PFLU_RS06000	0.88	-1.0
1,343,648	+		PFLU_RS06000	0.88	+0.5
1,343,648	+		PFLU_RS06000	0.88	+0.8
1,343,648	+		PFLU_RS06000	0.88	-0.4
1,343,648	+		PFLU_RS06000	0.88	-0.2
1,343,649	-		PFLU_RS06000	0.88	-1.6
1,343,649	-		PFLU_RS06000	0.88	-0.6
1,343,649	-		PFLU_RS06000	0.88	-1.4
1,343,649	-		PFLU_RS06000	0.88	+0.8
1,343,649	-		PFLU_RS06000	0.88	+0.2
1,343,649	-		PFLU_RS06000	0.88	+0.1
1,343,649	-		PFLU_RS06000	0.88	-0.8
1,343,649	-		PFLU_RS06000	0.88	+0.2
1,343,649	-		PFLU_RS06000	0.88	+0.0
1,343,649	-		PFLU_RS06000	0.88	+1.0
1,343,649	-		PFLU_RS06000	0.88	+1.0
1,343,649	-		PFLU_RS06000	0.88	+0.3
1,343,650	+		PFLU_RS06000	0.88	+0.0
1,343,650	+		PFLU_RS06000	0.88	+0.2
1,343,650	+		PFLU_RS06000	0.88	+0.3
1,343,651	-		PFLU_RS06000	0.88	+0.4
1,343,651	-		PFLU_RS06000	0.88	-0.3
1,343,651	-		PFLU_RS06000	0.88	-2.2
1,343,651	-		PFLU_RS06000	0.88	+0.5
1,343,651	-		PFLU_RS06000	0.88	-1.2
1,343,804	+				+0.8
1,343,804	+				-1.7
1,343,804	+				-0.2
1,343,804	+				+0.7
1,343,805	-				+1.2
1,343,805	-				-0.4
1,343,805	-				-0.3
1,343,805	-				+0.7
1,343,808	+				+1.0
1,343,809	-				-0.1
1,343,849	+				+0.9
1,343,849	+				-0.2
1,343,849	+				-0.1
1,343,849	+				+1.2
1,343,849	+				-1.3
1,343,849	+				+1.4
1,343,849	+				+1.2
1,343,849	+				+0.5
1,343,849	+				-2.0
1,343,849	+				-0.0
1,343,849	+				-0.1
1,343,849	+				+0.2
1,343,849	+				-0.9
1,343,849	+				-2.6
1,343,849	+				-1.8
1,343,849	+				+0.2
1,343,849	+				-0.4
1,343,849	+				+0.8
1,343,849	+				+1.2
1,343,849	+				+1.2
1,343,849	+				-0.1
1,343,849	+				-0.4
1,343,849	+				+0.1
1,343,850	-				+0.7
1,343,850	-				+0.1
1,343,850	-				-0.8
1,343,850	-				+0.6
1,343,850	-				+0.7
1,343,850	-				-0.8
1,343,850	-				-1.3
1,343,850	-				-0.2
1,343,850	-				-0.3
1,343,850	-				+0.7
1,343,850	-				-0.4
1,343,850	-				-1.9
1,343,850	-				+0.6
1,343,850	-				-0.4
1,343,850	-				+0.2
1,343,850	-				-2.7
1,343,850	-				-2.2
1,343,850	-				-0.1
1,343,850	-				+0.6
1,343,861	+				+0.2
1,343,862	-				-0.4
1,343,896	+				-0.7
1,343,896	+				-1.0
1,343,906	+				-0.1
1,343,906	+				+0.3
1,343,906	+				-0.1
1,343,906	+				-0.2
1,343,906	+				-0.8
1,343,906	+				-0.3
1,343,906	+				-0.8
1,343,906	+				-0.1
1,343,906	+				+1.0
1,343,907	-				-0.3
1,343,907	-				-1.1
1,343,907	-				-2.2
1,343,907	-				-1.0
1,344,017	+		PFLU_RS06005	0.11	+0.1
1,344,018	-		PFLU_RS06005	0.11	-1.6
1,344,018	-		PFLU_RS06005	0.11	+1.2
1,344,018	-		PFLU_RS06005	0.11	-0.6
1,344,210	+		PFLU_RS06005	0.24	-0.1
1,344,210	+		PFLU_RS06005	0.24	+0.3
1,344,210	+		PFLU_RS06005	0.24	+0.5
1,344,210	+		PFLU_RS06005	0.24	-0.1
1,344,210	+		PFLU_RS06005	0.24	+0.3
1,344,210	+		PFLU_RS06005	0.24	+0.6
1,344,211	-		PFLU_RS06005	0.24	-1.3
1,344,211	-		PFLU_RS06005	0.24	-0.2
1,344,211	-		PFLU_RS06005	0.24	-1.2
1,344,211	-		PFLU_RS06005	0.24	-0.3
1,344,211	-		PFLU_RS06005	0.24	+0.6
1,344,211	-		PFLU_RS06005	0.24	+0.6
1,344,211	-		PFLU_RS06005	0.24	+0.4
1,344,211	-		PFLU_RS06005	0.24	-1.0
1,344,218	+		PFLU_RS06005	0.24	+0.6
1,344,218	+		PFLU_RS06005	0.24	+1.2
1,344,218	+		PFLU_RS06005	0.24	+0.9
1,344,218	+		PFLU_RS06005	0.24	-2.3
1,344,219	-		PFLU_RS06005	0.24	-0.6
1,344,221	+		PFLU_RS06005	0.24	-0.1
1,344,221	+		PFLU_RS06005	0.24	+0.5
1,344,221	+		PFLU_RS06005	0.24	+0.2
1,344,221	+		PFLU_RS06005	0.24	-0.5
1,344,221	+		PFLU_RS06005	0.24	-0.2
1,344,221	+		PFLU_RS06005	0.24	-1.0
1,344,222	-		PFLU_RS06005	0.24	-0.3
1,344,222	-		PFLU_RS06005	0.24	-0.1
1,344,222	-		PFLU_RS06005	0.24	+0.3
1,344,222	-		PFLU_RS06005	0.24	-1.0
1,344,437	+		PFLU_RS06005	0.39	-0.3
1,344,437	+		PFLU_RS06005	0.39	+1.2
1,344,437	+		PFLU_RS06005	0.39	-1.1
1,344,437	+		PFLU_RS06005	0.39	-0.3
1,344,437	+		PFLU_RS06005	0.39	-1.5
1,344,438	-		PFLU_RS06005	0.39	+0.4
1,344,476	+		PFLU_RS06005	0.41	-0.5
1,344,476	+		PFLU_RS06005	0.41	+0.2
1,344,476	+		PFLU_RS06005	0.41	+1.3
1,344,476	+		PFLU_RS06005	0.41	-0.7
1,344,477	-		PFLU_RS06005	0.41	-0.5
1,344,477	-		PFLU_RS06005	0.41	-1.1
1,344,477	-		PFLU_RS06005	0.41	-0.6
1,344,477	-		PFLU_RS06005	0.41	-2.2
1,344,477	-		PFLU_RS06005	0.41	-0.1
1,344,477	-		PFLU_RS06005	0.41	-1.4
1,344,477	-		PFLU_RS06005	0.41	-1.2
1,344,477	-		PFLU_RS06005	0.41	+0.5
1,344,477	-		PFLU_RS06005	0.41	-0.4
1,344,479	+		PFLU_RS06005	0.42	-0.4
1,344,479	+		PFLU_RS06005	0.42	+0.8
1,344,479	+		PFLU_RS06005	0.42	+0.2
1,344,480	-		PFLU_RS06005	0.42	+0.2
1,344,480	-		PFLU_RS06005	0.42	+1.5
1,344,480	-		PFLU_RS06005	0.42	-0.1
1,344,485	+		PFLU_RS06005	0.42	+1.2
1,344,485	+		PFLU_RS06005	0.42	+1.0
1,344,486	-		PFLU_RS06005	0.42	+0.4
1,344,486	-		PFLU_RS06005	0.42	-1.8
1,344,486	-		PFLU_RS06005	0.42	-1.2
1,344,532	+		PFLU_RS06005	0.45	+0.5
1,344,532	+		PFLU_RS06005	0.45	-0.3
1,344,533	-		PFLU_RS06005	0.45	+0.6
1,344,533	-		PFLU_RS06005	0.45	+0.7
1,344,621	+		PFLU_RS06005	0.51	-0.2
1,344,733	-		PFLU_RS06005	0.59	+1.0
1,344,795	+		PFLU_RS06005	0.63	+0.5
1,344,795	+		PFLU_RS06005	0.63	-0.3
1,344,795	+		PFLU_RS06005	0.63	+0.5
1,344,795	+		PFLU_RS06005	0.63	-0.6
1,344,795	+		PFLU_RS06005	0.63	-1.2
1,344,795	+		PFLU_RS06005	0.63	+0.5
1,344,795	+		PFLU_RS06005	0.63	+1.2
1,344,795	+		PFLU_RS06005	0.63	-1.1
1,344,796	-		PFLU_RS06005	0.63	+0.2
1,344,796	-		PFLU_RS06005	0.63	-2.2
1,344,796	-		PFLU_RS06005	0.63	+0.9
1,344,796	-		PFLU_RS06005	0.63	+0.6
1,344,796	-		PFLU_RS06005	0.63	+0.2
1,344,796	-		PFLU_RS06005	0.63	-0.7
1,344,796	-		PFLU_RS06005	0.63	+1.7
1,344,796	-		PFLU_RS06005	0.63	+0.7
1,344,848	+		PFLU_RS06005	0.66	+0.5
1,344,908	+		PFLU_RS06005	0.70	+0.0
1,344,909	-		PFLU_RS06005	0.70	+2.5
1,344,909	-		PFLU_RS06005	0.70	-1.4
1,344,909	-		PFLU_RS06005	0.70	-0.2
1,344,920	+		PFLU_RS06005	0.71	-0.4
1,344,921	-		PFLU_RS06005	0.71	-0.5
1,344,921	-		PFLU_RS06005	0.71	+1.2
1,345,058	+		PFLU_RS06005	0.81	-0.8
1,345,059	-		PFLU_RS06005	0.81	+0.8
1,345,059	-		PFLU_RS06005	0.81	-0.8
1,345,185	+		PFLU_RS06005	0.89	-1.2
1,345,359	+				+0.2
1,345,359	+				-0.0
1,345,359	+				+0.6
1,345,359	+				-1.7
1,345,359	+				-0.0
1,345,360	-				+1.0
1,345,360	-				+1.2
1,345,360	-				+3.7
1,345,360	-				+0.9
1,345,360	-				-0.3
1,345,381	+				+0.8
1,345,381	+				+0.2
1,345,382	-				-0.1
1,345,382	-				-0.0
1,345,388	+				-0.8
1,345,388	+				+1.9
1,345,388	+				+0.9
1,345,388	+				+0.7
1,345,389	-				+1.2
1,345,389	-				-0.8
1,345,389	-				-0.4
1,345,398	+				+0.3
1,345,398	+				-0.5
1,345,398	+				-0.7
1,345,398	+				+0.2
1,345,399	-				-0.2
1,345,424	+				+1.2
1,345,424	+				+0.7
1,345,424	+				-0.1
1,345,428	-				-0.8
1,345,428	-				-0.2
1,345,431	+				+1.0
1,345,455	+				+0.7
1,345,455	+				+2.0
1,345,456	-				-0.5
1,345,456	-				-2.1
1,345,593	+		PFLU_RS06010	0.16	-0.1
1,345,593	+		PFLU_RS06010	0.16	+0.8
1,345,622	+		PFLU_RS06010	0.19	-0.7
1,345,623	-		PFLU_RS06010	0.19	-1.4
1,345,735	+		PFLU_RS06010	0.31	-0.7
1,345,954	+		PFLU_RS06010	0.55	-0.7
1,345,954	+		PFLU_RS06010	0.55	-0.7
1,345,954	+		PFLU_RS06010	0.55	-1.4
1,345,954	+		PFLU_RS06010	0.55	-0.3
1,345,954	+		PFLU_RS06010	0.55	-0.1
1,345,955	-		PFLU_RS06010	0.55	+0.6
1,345,965	+		PFLU_RS06010	0.56	-1.8
1,345,965	+		PFLU_RS06010	0.56	+1.0
1,345,966	-		PFLU_RS06010	0.57	+0.5
1,345,967	+		PFLU_RS06010	0.57	+0.8
1,345,967	+		PFLU_RS06010	0.57	+1.0
1,345,967	+		PFLU_RS06010	0.57	-1.1
1,345,967	+		PFLU_RS06010	0.57	-1.4
1,345,967	+		PFLU_RS06010	0.57	-0.7
1,345,967	+		PFLU_RS06010	0.57	-1.0
1,345,967	+		PFLU_RS06010	0.57	+0.3
1,345,967	+		PFLU_RS06010	0.57	-0.5
1,345,967	+		PFLU_RS06010	0.57	-1.4
1,345,967	+		PFLU_RS06010	0.57	+0.6
1,345,967	+		PFLU_RS06010	0.57	+2.2
1,345,968	-		PFLU_RS06010	0.57	+0.7
1,345,968	-		PFLU_RS06010	0.57	+0.3
1,345,968	-		PFLU_RS06010	0.57	+0.2
1,345,968	-		PFLU_RS06010	0.57	+0.5
1,345,968	-		PFLU_RS06010	0.57	+0.2
1,345,968	-		PFLU_RS06010	0.57	-0.0
1,345,968	-		PFLU_RS06010	0.57	-1.1
1,346,009	+		PFLU_RS06010	0.61	-1.0
1,346,045	+		PFLU_RS06010	0.65	-0.1
1,346,045	+		PFLU_RS06010	0.65	+0.6
1,346,046	-		PFLU_RS06010	0.65	-2.0
1,346,046	-		PFLU_RS06010	0.65	+0.7
1,346,046	-		PFLU_RS06010	0.65	-1.1
1,346,049	-		PFLU_RS06010	0.66	-1.1
1,346,049	-		PFLU_RS06010	0.66	-1.2
1,346,281	-				+0.4
1,346,281	-				-0.4
1,346,331	+				-0.3