Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS31065

Experiment: Choline chloride 10 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline chloride 10 mM (C)
5,539,412	-				-0.9
5,539,412	-				+0.0
5,539,412	-				-0.9
5,539,412	-				+1.8
5,539,419	-				-1.6
5,539,437	+				+1.6
5,539,438	-				-1.6
5,539,456	-				+1.3
5,539,492	-				-0.4
5,539,506	-				-1.6
5,539,584	+				+0.7
5,539,584	+				-1.0
5,539,584	+				-1.6
5,539,584	+				+1.4
5,539,584	+				+0.9
5,539,584	+				-0.9
5,539,584	+				+1.9
5,539,584	+				-1.8
5,539,584	+				+0.2
5,539,584	+				+1.9
5,539,585	-				+1.9
5,539,585	-				+2.8
5,539,585	-				+2.4
5,539,585	-				+2.3
5,539,585	-				+1.9
5,539,596	+				-2.3
5,539,596	+				-1.2
5,539,596	+				-2.1
5,539,596	+				+0.3
5,539,596	+				-0.1
5,539,596	+				+0.8
5,539,596	+				+0.7
5,539,597	-				+0.5
5,539,597	-				-2.2
5,539,597	-				+1.0
5,539,597	-				-1.3
5,539,597	-				+1.5
5,539,680	+		PFLU_RS24720	0.15	-1.7
5,539,680	+		PFLU_RS24720	0.15	+1.8
5,539,680	+		PFLU_RS24720	0.15	+1.1
5,539,680	+		PFLU_RS24720	0.15	+1.1
5,539,680	+		PFLU_RS24720	0.15	+0.3
5,539,680	+		PFLU_RS24720	0.15	-1.2
5,539,680	+		PFLU_RS24720	0.15	+1.3
5,539,680	+		PFLU_RS24720	0.15	+0.7
5,539,680	+		PFLU_RS24720	0.15	+0.6
5,539,681	-		PFLU_RS24720	0.15	+1.9
5,539,681	-		PFLU_RS24720	0.15	-2.0
5,539,681	-		PFLU_RS24720	0.15	+0.3
5,539,681	-		PFLU_RS24720	0.15	+3.5
5,539,681	-		PFLU_RS24720	0.15	+1.4
5,539,681	-		PFLU_RS24720	0.15	+1.4
5,539,681	-		PFLU_RS24720	0.15	+2.2
5,539,852	+		PFLU_RS24720	0.39	+0.9
5,539,852	+		PFLU_RS24720	0.39	-1.1
5,539,852	+		PFLU_RS24720	0.39	-2.0
5,539,852	+		PFLU_RS24720	0.39	+0.0
5,539,852	+		PFLU_RS24720	0.39	-1.8
5,539,852	+		PFLU_RS24720	0.39	+0.3
5,539,852	+		PFLU_RS24720	0.39	-1.4
5,539,852	+		PFLU_RS24720	0.39	+0.9
5,539,852	+		PFLU_RS24720	0.39	+0.9
5,539,852	+		PFLU_RS24720	0.39	-0.1
5,539,852	+		PFLU_RS24720	0.39	-0.1
5,539,853	-		PFLU_RS24720	0.39	+0.9
5,539,853	-		PFLU_RS24720	0.39	+3.4
5,539,853	-		PFLU_RS24720	0.39	+2.7
5,539,853	-		PFLU_RS24720	0.39	-1.6
5,539,853	-		PFLU_RS24720	0.39	+0.3
5,539,853	-		PFLU_RS24720	0.39	+2.5
5,540,052	+		PFLU_RS24720	0.68	-0.1
5,540,053	-		PFLU_RS24720	0.68	+1.9
5,540,053	-		PFLU_RS24720	0.68	-1.6
5,540,053	-		PFLU_RS24720	0.68	-1.8
5,540,092	-		PFLU_RS24720	0.73	+0.3
5,540,092	-		PFLU_RS24720	0.73	+0.1
5,540,092	-		PFLU_RS24720	0.73	+0.4
5,540,220	+				+0.1
5,540,220	+				+0.9
5,540,221	-				-1.2
5,540,237	+				+2.4
5,540,237	+				-1.7
5,540,237	+				-0.7
5,540,237	+				-0.8
5,540,237	+				-0.1
5,540,237	+				-0.4
5,540,237	+				-2.2
5,540,237	+				+2.8
5,540,237	+				-1.4
5,540,237	+				+1.7
5,540,238	-				+0.9
5,540,238	-				+0.3
5,540,238	-				+0.0
5,540,238	-				+2.4
5,540,238	-				-1.7
5,540,246	+				-0.9
5,540,246	+				-1.3
5,540,247	-				+1.2
5,540,254	-				-1.6
5,540,283	+				-1.7
5,540,283	+				+1.1
5,540,283	+				-1.1
5,540,283	+				+1.3
5,540,283	+				+0.3
5,540,283	+				+1.0
5,540,283	+				-0.1
5,540,283	+				-2.0
5,540,283	+				+1.1
5,540,283	+				-0.8
5,540,284	-				+0.1
5,540,284	-				-0.7
5,540,284	-				-2.3
5,540,284	-				+1.4
5,540,284	-				+1.3
5,540,284	-				-2.9
5,540,284	-				-2.6
5,540,356	+				+1.4
5,540,356	+				+0.7
5,540,390	+				+0.9
5,540,390	+				-0.0
5,540,390	+				-2.0
5,540,391	-				-2.4
5,540,391	-				+3.4
5,540,392	+				-0.1
5,540,392	+				+0.3
5,540,392	+				-1.3
5,540,392	+				-0.9
5,540,392	+				-2.3
5,540,392	+				-1.4
5,540,392	+				-2.3
5,540,392	+				-2.1
5,540,392	+				+1.1
5,540,392	+				+0.0
5,540,392	+				+0.9
5,540,392	+				-0.1
5,540,392	+				+1.3
5,540,392	+				-0.9
5,540,393	-				-0.7
5,540,393	-				-1.3
5,540,393	-				-1.7
5,540,393	-				+0.3
5,540,393	-				-1.7
5,540,393	-				+0.3
5,540,393	-				+0.2
5,540,393	-				+1.1
5,540,393	-				-2.0
5,540,393	-				+1.1
5,540,393	-				+2.5
5,540,393	-				-1.3
5,540,412	-				+1.4
5,540,468	-		PFLU_RS31065	0.24	-0.5
5,540,483	+		PFLU_RS31065	0.30	+1.8
5,540,620	-		PFLU_RS31065	0.85	-1.3
5,540,628	+		PFLU_RS31065	0.89	+2.4
5,540,644	+				-0.1
5,540,645	-				-0.4
5,540,672	+				-1.8
5,540,672	+				-1.3
5,540,673	-				-1.6
5,540,673	-				-2.5
5,540,673	-				-1.1
5,540,673	-				-0.9
5,540,685	+				-1.4
5,540,685	+				+1.4
5,540,686	-				+1.2
5,540,686	-				-0.9
5,540,686	-				+2.9
5,540,689	+				+0.5
5,540,689	+				+1.2
5,540,689	+				-1.3
5,540,689	+				-1.5
5,540,689	+				+0.3
5,540,689	+				+1.3
5,540,689	+				-1.3
5,540,689	+				-2.2
5,540,690	-				+0.9
5,540,690	-				-1.1
5,540,690	-				-1.7
5,540,702	-				-1.0
5,540,702	-				-3.0
5,540,710	+				+1.0
5,540,710	+				+0.9
5,540,711	-				+1.9
5,540,712	+				+0.3
5,540,733	+				-1.0
5,540,733	+				+0.3
5,540,734	-				-1.3
5,540,734	-				-1.9
5,540,734	-				-0.9
5,540,734	-				-2.3
5,540,740	+				+1.4
5,540,740	+				-0.4
5,540,740	+				-0.4
5,540,740	+				+0.8
5,540,741	-				-0.9
5,540,747	+				-1.0
5,540,747	+				-0.0
5,540,748	-				-2.1
5,540,768	+				+0.8
5,540,768	+				+0.9
5,540,768	+				+3.2
5,540,768	+				-0.1
5,540,768	+				+1.5
5,540,768	+				-1.3
5,540,768	+				+0.2
5,540,768	+				-2.7
5,540,768	+				-0.7
5,540,768	+				-0.2
5,540,768	+				-0.2
5,540,769	-				+2.7
5,540,769	-				+0.8
5,540,769	-				-1.4
5,540,769	-				+1.2
5,540,769	-				-1.6
5,540,769	-				+1.2
5,540,769	-				-2.3
5,540,769	-				+0.8
5,540,769	-				+0.5
5,540,769	-				-0.3
5,540,769	-				-1.1
5,540,769	-				-0.2
5,540,769	-				-1.1
5,540,769	-				+1.0
5,540,778	-				-1.6
5,540,778	-				+0.1
5,540,814	-				-1.2
5,540,831	+				-1.9