Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS26755

Experiment: Choline chloride 10 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline chloride 10 mM (C)
5,976,091	+		PFLU_RS26750	0.35	-0.2
5,976,120	+		PFLU_RS26750	0.38	+2.2
5,976,120	+		PFLU_RS26750	0.38	+1.3
5,976,120	+		PFLU_RS26750	0.38	+1.0
5,976,246	-		PFLU_RS26750	0.46	-1.7
5,976,270	+		PFLU_RS26750	0.48	-0.2
5,976,407	+		PFLU_RS26750	0.58	+0.4
5,976,407	+		PFLU_RS26750	0.58	+0.3
5,976,407	+		PFLU_RS26750	0.58	+2.7
5,976,407	+		PFLU_RS26750	0.58	+2.0
5,976,407	+		PFLU_RS26750	0.58	+1.3
5,976,407	+		PFLU_RS26750	0.58	+1.5
5,976,407	+		PFLU_RS26750	0.58	-0.0
5,976,407	+		PFLU_RS26750	0.58	-0.6
5,976,407	+		PFLU_RS26750	0.58	-2.1
5,976,407	+		PFLU_RS26750	0.58	-2.7
5,976,407	+		PFLU_RS26750	0.58	-0.3
5,976,407	+		PFLU_RS26750	0.58	+2.8
5,976,407	+		PFLU_RS26750	0.58	-1.5
5,976,408	-		PFLU_RS26750	0.58	+0.8
5,976,408	-		PFLU_RS26750	0.58	-2.3
5,976,408	-		PFLU_RS26750	0.58	+2.3
5,976,408	-		PFLU_RS26750	0.58	+0.3
5,976,408	-		PFLU_RS26750	0.58	+0.5
5,976,408	-		PFLU_RS26750	0.58	+0.6
5,976,408	-		PFLU_RS26750	0.58	-0.3
5,976,515	-		PFLU_RS26750	0.65	-1.3
5,976,539	+		PFLU_RS26750	0.67	+0.5
5,976,539	+		PFLU_RS26750	0.67	+1.1
5,976,539	+		PFLU_RS26750	0.67	-0.6
5,976,539	+		PFLU_RS26750	0.67	-1.4
5,976,539	+		PFLU_RS26750	0.67	-0.0
5,976,539	+		PFLU_RS26750	0.67	-0.2
5,976,539	+		PFLU_RS26750	0.67	-2.0
5,976,539	+		PFLU_RS26750	0.67	-2.3
5,976,539	+		PFLU_RS26750	0.67	+2.5
5,976,539	+		PFLU_RS26750	0.67	+0.6
5,976,539	+		PFLU_RS26750	0.67	+1.2
5,976,539	+		PFLU_RS26750	0.67	+0.3
5,976,540	-		PFLU_RS26750	0.67	-1.0
5,976,540	-		PFLU_RS26750	0.67	-1.8
5,976,540	-		PFLU_RS26750	0.67	-1.0
5,976,540	-		PFLU_RS26750	0.67	-2.3
5,976,540	-		PFLU_RS26750	0.67	-0.3
5,976,540	-		PFLU_RS26750	0.67	+0.4
5,976,540	-		PFLU_RS26750	0.67	-1.4
5,976,540	-		PFLU_RS26750	0.67	+0.5
5,976,540	-		PFLU_RS26750	0.67	+0.6
5,976,540	-		PFLU_RS26750	0.67	+1.8
5,976,582	-		PFLU_RS26750	0.70	-2.0
5,976,582	-		PFLU_RS26750	0.70	+3.3
5,976,610	+		PFLU_RS26750	0.72	-1.1
5,976,611	-		PFLU_RS26750	0.72	-1.5
5,976,611	-		PFLU_RS26750	0.72	+0.6
5,976,728	+		PFLU_RS26750	0.80	+0.6
5,976,728	+		PFLU_RS26750	0.80	+1.7
5,976,728	+		PFLU_RS26750	0.80	-0.2
5,976,728	+		PFLU_RS26750	0.80	-1.3
5,976,728	+		PFLU_RS26750	0.80	-0.2
5,976,728	+		PFLU_RS26750	0.80	-3.1
5,976,728	+		PFLU_RS26750	0.80	-1.2
5,976,728	+		PFLU_RS26750	0.80	+0.8
5,976,728	+		PFLU_RS26750	0.80	+0.3
5,976,728	+		PFLU_RS26750	0.80	-0.8
5,976,728	+		PFLU_RS26750	0.80	-1.0
5,976,729	-		PFLU_RS26750	0.80	-0.8
5,976,729	-		PFLU_RS26750	0.80	+2.6
5,976,729	-		PFLU_RS26750	0.80	+1.2
5,976,729	-		PFLU_RS26750	0.80	-1.6
5,976,729	-		PFLU_RS26750	0.80	+0.4
5,976,729	-		PFLU_RS26750	0.80	-0.6
5,976,729	-		PFLU_RS26750	0.80	-2.5
5,976,808	+		PFLU_RS26750	0.85	-0.3
5,976,853	-		PFLU_RS26750	0.89	+0.3
5,976,905	+				+2.1
5,976,905	+				-2.3
5,976,905	+				-2.3
5,976,905	+				+1.7
5,976,905	+				-0.8
5,976,905	+				+0.9
5,976,905	+				+0.8
5,976,905	+				-0.3
5,976,905	+				-1.7
5,976,905	+				+1.0
5,976,905	+				+1.7
5,976,905	+				-1.2
5,976,905	+				+2.0
5,976,905	+				-1.2
5,976,905	+				+1.6
5,976,905	+				-2.2
5,976,906	-				-1.0
5,976,906	-				+0.7
5,976,906	-				+0.7
5,976,906	-				-0.3
5,976,906	-				+1.0
5,976,906	-				-1.7
5,976,906	-				-0.6
5,976,906	-				+0.4
5,976,906	-				-1.2
5,976,906	-				+1.2
5,976,906	-				-2.5
5,976,906	-				-1.2
5,976,906	-				+0.9
5,976,912	+				+0.4
5,976,912	+				+0.4
5,976,912	+				-0.5
5,976,913	-				-0.0
5,976,913	-				-0.7
5,976,913	-				+0.2
5,976,913	-				+1.6
5,976,915	+				-3.2
5,976,915	+				-2.9
5,976,915	+				-0.3
5,976,915	+				-0.3
5,976,915	+				+0.1
5,976,915	+				-0.3
5,976,915	+				+0.3
5,976,915	+				-1.5
5,976,915	+				-1.2
5,976,915	+				-1.5
5,976,915	+				+1.5
5,976,915	+				-0.6
5,976,915	+				-2.2
5,976,915	+				-1.3
5,976,915	+				+1.0
5,976,916	-				+0.6
5,976,916	-				+0.2
5,976,916	-				-1.5
5,976,916	-				+1.1
5,976,916	-				+0.8
5,976,916	-				-0.9
5,976,916	-				-1.9
5,976,916	-				-1.0
5,976,916	-				+0.4
5,976,916	-				+1.7
5,976,916	-				-1.7
5,976,916	-				+0.5
5,976,916	-				-1.7
5,976,916	-				-0.8
5,976,916	-				+1.0
5,976,916	-				+0.8
5,976,923	+				-0.6
5,976,923	+				-1.0
5,976,923	+				+0.1
5,976,923	+				+0.4
5,976,923	+				+1.4
5,976,923	+				+1.3
5,976,923	+				+0.2
5,976,923	+				-0.8
5,976,923	+				-0.8
5,976,923	+				-3.3
5,976,924	-				+2.5
5,976,924	-				-0.6
5,976,924	-				-0.0
5,976,924	-				-1.2
5,976,924	-				-1.2
5,976,924	-				-1.2
5,976,924	-				-1.8
5,976,924	-				-1.9
5,976,935	+				+1.1
5,976,935	+				-0.8
5,976,936	-				-2.3
5,976,936	-				+0.9
5,976,936	-				-0.5
5,976,936	-				+0.4
5,977,013	+				+1.3
5,977,013	+				-1.0
5,977,013	+				-1.7
5,977,013	+				-1.3
5,977,013	+				+1.4
5,977,013	+				+1.3
5,977,013	+				-1.7
5,977,013	+				+1.2
5,977,013	+				-0.5
5,977,013	+				-1.8
5,977,013	+				-1.3
5,977,013	+				-1.2
5,977,013	+				-1.3
5,977,013	+				-1.0
5,977,013	+				+1.0
5,977,013	+				-0.8
5,977,013	+				-0.5
5,977,013	+				-0.3
5,977,013	+				+1.7
5,977,013	+				-0.8
5,977,014	-				+2.0
5,977,014	-				-1.8
5,977,014	-				-2.1
5,977,014	-				-0.8
5,977,014	-				+0.9
5,977,014	-				+1.3
5,977,014	-				+1.8
5,977,014	-				-1.8
5,977,014	-				+1.8
5,977,014	-				+0.5
5,977,014	-				-2.5
5,977,014	-				-2.2
5,977,014	-				-0.7
5,977,014	-				-0.3
5,977,014	-				+1.1
5,977,014	-				+2.6
5,977,014	-				+2.2
5,977,014	-				+0.4
5,977,014	-				-1.6
5,977,014	-				-1.6
5,977,014	-				-0.1
5,977,014	-				-0.4
5,977,014	-				-2.0
5,977,014	-				+0.3
5,977,014	-				+2.0
5,977,022	+				+0.5
5,977,022	+				+1.7
5,977,022	+				+1.2
5,977,023	-				+0.3
5,977,023	-				-1.6
5,977,023	-				-1.6
5,977,079	+				-1.5
5,977,079	+				-0.9
5,977,079	+				-2.8
5,977,079	+				+2.0
5,977,079	+				+0.5
5,977,079	+				+0.4
5,977,079	+				-3.7
5,977,079	+				+1.0
5,977,079	+				-1.3
5,977,079	+				-3.4
5,977,079	+				-1.6
5,977,079	+				-1.7
5,977,079	+				-1.5
5,977,079	+				-2.3
5,977,079	+				+2.7
5,977,079	+				-0.0
5,977,079	+				+1.2
5,977,080	-				+1.4
5,977,080	-				+1.3
5,977,080	-				+0.1
5,977,080	-				-1.7
5,977,080	-				-1.3
5,977,080	-				-0.8
5,977,080	-				-0.3
5,977,080	-				-1.6
5,977,080	-				+0.2
5,977,080	-				-0.8
5,977,080	-				-0.4
5,977,080	-				+0.9
5,977,080	-				+1.2
5,977,080	-				-0.0
5,977,080	-				-1.8
5,977,080	-				-0.8
5,977,080	-				+0.2
5,977,116	+				-1.6
5,977,117	-				-0.0
5,977,282	-		PFLU_RS26755	0.14	+2.0
5,977,325	+		PFLU_RS26755	0.18	+0.9
5,977,552	+		PFLU_RS26755	0.34	-2.5
5,977,629	+		PFLU_RS26755	0.39	+1.0
5,977,629	+		PFLU_RS26755	0.39	-0.3
5,977,629	+		PFLU_RS26755	0.39	-0.3
5,977,629	+		PFLU_RS26755	0.39	-1.6
5,977,629	+		PFLU_RS26755	0.39	+1.0
5,977,630	-		PFLU_RS26755	0.39	-2.5
5,977,630	-		PFLU_RS26755	0.39	+0.8
5,977,630	-		PFLU_RS26755	0.39	+0.5
5,977,630	-		PFLU_RS26755	0.39	+0.1
5,977,630	-		PFLU_RS26755	0.39	-1.6
5,977,630	-		PFLU_RS26755	0.39	-1.5
5,977,753	+		PFLU_RS26755	0.48	+2.3
5,977,753	+		PFLU_RS26755	0.48	+2.7
5,977,753	+		PFLU_RS26755	0.48	-0.0
5,977,753	+		PFLU_RS26755	0.48	-2.0
5,977,753	+		PFLU_RS26755	0.48	-0.3
5,977,753	+		PFLU_RS26755	0.48	-1.7
5,977,753	+		PFLU_RS26755	0.48	+0.9
5,977,753	+		PFLU_RS26755	0.48	-0.6
5,977,753	+		PFLU_RS26755	0.48	-1.9
5,977,753	+		PFLU_RS26755	0.48	-1.5
5,977,753	+		PFLU_RS26755	0.48	-2.3
5,977,753	+		PFLU_RS26755	0.48	+1.6
5,977,753	+		PFLU_RS26755	0.48	-0.3
5,977,754	-		PFLU_RS26755	0.48	-0.8
5,977,754	-		PFLU_RS26755	0.48	-1.0
5,977,754	-		PFLU_RS26755	0.48	-0.0
5,977,754	-		PFLU_RS26755	0.48	-1.9
5,977,754	-		PFLU_RS26755	0.48	-1.5
5,977,754	-		PFLU_RS26755	0.48	-2.5
5,977,754	-		PFLU_RS26755	0.48	+1.0
5,977,754	-		PFLU_RS26755	0.48	-0.5
5,977,754	-		PFLU_RS26755	0.48	-0.1
5,977,754	-		PFLU_RS26755	0.48	-1.3
5,977,754	-		PFLU_RS26755	0.48	+4.0
5,977,887	+		PFLU_RS26755	0.58	+2.6
5,977,938	+		PFLU_RS26755	0.62	-2.8
5,977,938	+		PFLU_RS26755	0.62	+1.5
5,977,938	+		PFLU_RS26755	0.62	+1.0
5,977,938	+		PFLU_RS26755	0.62	-1.3
5,977,938	+		PFLU_RS26755	0.62	+0.2
5,977,938	+		PFLU_RS26755	0.62	+0.7
5,977,939	-		PFLU_RS26755	0.62	-1.0
5,977,939	-		PFLU_RS26755	0.62	-2.0
5,977,939	-		PFLU_RS26755	0.62	-1.5
5,977,939	-		PFLU_RS26755	0.62	-1.8
5,977,939	-		PFLU_RS26755	0.62	+1.6
5,978,019	+		PFLU_RS26755	0.67	-2.5
5,978,019	+		PFLU_RS26755	0.67	-0.6
5,978,020	-		PFLU_RS26755	0.67	-1.7
5,978,085	+		PFLU_RS26755	0.72	+0.7
5,978,085	+		PFLU_RS26755	0.72	-0.0
5,978,085	+		PFLU_RS26755	0.72	+1.7
5,978,085	+		PFLU_RS26755	0.72	-2.5
5,978,085	+		PFLU_RS26755	0.72	+1.0
5,978,085	+		PFLU_RS26755	0.72	-2.4
5,978,085	+		PFLU_RS26755	0.72	+1.4
5,978,085	+		PFLU_RS26755	0.72	+1.8
5,978,086	-		PFLU_RS26755	0.72	+1.2
5,978,091	+		PFLU_RS26755	0.72	+1.4
5,978,091	+		PFLU_RS26755	0.72	-1.5
5,978,091	+		PFLU_RS26755	0.72	+1.5
5,978,091	+		PFLU_RS26755	0.72	-1.3
5,978,091	+		PFLU_RS26755	0.72	-1.6
5,978,092	-		PFLU_RS26755	0.73	-0.0
5,978,092	-		PFLU_RS26755	0.73	-0.6
5,978,092	-		PFLU_RS26755	0.73	-1.6
5,978,092	-		PFLU_RS26755	0.73	+3.5
5,978,092	-		PFLU_RS26755	0.73	+0.4
5,978,092	-		PFLU_RS26755	0.73	-3.0
5,978,092	-		PFLU_RS26755	0.73	-2.2
5,978,092	-		PFLU_RS26755	0.73	+1.7
5,978,092	-		PFLU_RS26755	0.73	+0.3
5,978,092	-		PFLU_RS26755	0.73	+2.0
5,978,178	+		PFLU_RS26755	0.79	+3.0
5,978,178	+		PFLU_RS26755	0.79	+1.1
5,978,178	+		PFLU_RS26755	0.79	-0.8
5,978,178	+		PFLU_RS26755	0.79	+1.9
5,978,178	+		PFLU_RS26755	0.79	-3.1
5,978,178	+		PFLU_RS26755	0.79	-1.6
5,978,178	+		PFLU_RS26755	0.79	+2.8
5,978,178	+		PFLU_RS26755	0.79	+1.7
5,978,178	+		PFLU_RS26755	0.79	+1.6
5,978,179	-		PFLU_RS26755	0.79	-2.9
5,978,179	-		PFLU_RS26755	0.79	-2.5
5,978,179	-		PFLU_RS26755	0.79	-0.2
5,978,179	-		PFLU_RS26755	0.79	+1.1
5,978,179	-		PFLU_RS26755	0.79	+0.1
5,978,179	-		PFLU_RS26755	0.79	+0.2
5,978,179	-		PFLU_RS26755	0.79	+0.6
5,978,295	+		PFLU_RS26755	0.87	-0.1
5,978,295	+		PFLU_RS26755	0.87	+0.2
5,978,295	+		PFLU_RS26755	0.87	-2.5
5,978,295	+		PFLU_RS26755	0.87	+2.0
5,978,295	+		PFLU_RS26755	0.87	+0.5
5,978,296	-		PFLU_RS26755	0.87	-1.2
5,978,296	-		PFLU_RS26755	0.87	-0.8
5,978,296	-		PFLU_RS26755	0.87	+0.5
5,978,296	-		PFLU_RS26755	0.87	-1.7
5,978,296	-		PFLU_RS26755	0.87	+2.0
5,978,325	+		PFLU_RS26755	0.89	-0.3
5,978,325	+		PFLU_RS26755	0.89	+0.4
5,978,325	+		PFLU_RS26755	0.89	-0.3
5,978,325	+		PFLU_RS26755	0.89	-2.1
5,978,325	+		PFLU_RS26755	0.89	+0.7
5,978,325	+		PFLU_RS26755	0.89	-0.3
5,978,326	-		PFLU_RS26755	0.89	+1.9
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