Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS22315

Experiment: Choline chloride 10 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline chloride 10 mM (C)
5,019,196	+		PFLU_RS22310	0.42	+0.1
5,019,196	+		PFLU_RS22310	0.42	-3.5
5,019,196	+		PFLU_RS22310	0.42	-4.2
5,019,197	-		PFLU_RS22310	0.42	-1.4
5,019,197	-		PFLU_RS22310	0.42	-0.4
5,019,197	-		PFLU_RS22310	0.42	-0.0
5,019,197	-		PFLU_RS22310	0.42	-1.3
5,019,197	-		PFLU_RS22310	0.42	-1.3
5,019,197	-		PFLU_RS22310	0.42	-2.0
5,019,197	-		PFLU_RS22310	0.42	+0.5
5,019,197	-		PFLU_RS22310	0.42	-0.6
5,019,244	-		PFLU_RS22310	0.45	-1.1
5,019,261	+		PFLU_RS22310	0.46	-1.1
5,019,261	+		PFLU_RS22310	0.46	-1.5
5,019,261	+		PFLU_RS22310	0.46	-0.8
5,019,261	+		PFLU_RS22310	0.46	-1.4
5,019,261	+		PFLU_RS22310	0.46	-2.4
5,019,261	+		PFLU_RS22310	0.46	-3.9
5,019,262	-		PFLU_RS22310	0.46	-3.6
5,019,262	-		PFLU_RS22310	0.46	-0.5
5,019,262	-		PFLU_RS22310	0.46	-3.7
5,019,262	-		PFLU_RS22310	0.46	-1.0
5,019,262	-		PFLU_RS22310	0.46	-2.4
5,019,262	-		PFLU_RS22310	0.46	-0.9
5,019,262	-		PFLU_RS22310	0.46	-2.4
5,019,262	-		PFLU_RS22310	0.46	-3.9
5,019,262	-		PFLU_RS22310	0.46	-2.1
5,019,262	-		PFLU_RS22310	0.46	-1.2
5,019,339	+		PFLU_RS22310	0.51	+0.7
5,019,339	+		PFLU_RS22310	0.51	-4.2
5,019,339	+		PFLU_RS22310	0.51	+0.4
5,019,339	+		PFLU_RS22310	0.51	-2.5
5,019,340	-		PFLU_RS22310	0.51	-1.0
5,019,340	-		PFLU_RS22310	0.51	-0.8
5,019,909	+		PFLU_RS22310	0.87	-0.4
5,019,909	+		PFLU_RS22310	0.87	-1.8
5,019,910	-		PFLU_RS22310	0.87	-0.5
5,019,910	-		PFLU_RS22310	0.87	-0.1
5,019,981	+				-4.2
5,019,982	-				-3.1
5,019,982	-				-2.8
5,019,982	-				-2.7
5,020,066	-				-0.6
5,020,074	+				-1.3
5,020,081	+				-4.4
5,020,109	-				+0.7
5,020,112	+				-1.0
5,020,112	+				-0.6
5,020,112	+				+0.6
5,020,112	+				-0.5
5,020,112	+				+0.5
5,020,112	+				+0.1
5,020,112	+				-1.4
5,020,112	+				+2.4
5,020,112	+				-0.8
5,020,112	+				+1.5
5,020,113	-				-2.1
5,020,113	-				-0.3
5,020,113	-				+0.5
5,020,113	-				-2.1
5,020,113	-				-0.0
5,020,113	-				+0.4
5,020,113	-				+1.2
5,020,113	-				-2.7
5,020,113	-				-2.3
5,020,113	-				+1.8
5,020,113	-				+1.8
5,020,113	-				+0.7
5,020,113	-				+1.5
5,020,113	-				-1.4
5,020,113	-				-0.5
5,020,113	-				-1.0
5,020,113	-				+0.8
5,020,113	-				-0.8
5,020,113	-				-0.5
5,020,113	-				-0.2
5,020,113	-				-0.3
5,020,165	+				+1.4
5,020,165	+				-1.0
5,020,165	+				-1.0
5,020,166	-				-0.7
5,020,175	-				+0.6
5,020,175	-				+1.2
5,020,289	+		PFLU_RS22315	0.20	-0.5
5,020,289	+		PFLU_RS22315	0.20	-1.4
5,020,296	+		PFLU_RS22315	0.21	-0.2
5,020,297	-		PFLU_RS22315	0.21	+0.7
5,020,413	+		PFLU_RS22315	0.38	+1.5
5,020,413	+		PFLU_RS22315	0.38	+0.0
5,020,413	+		PFLU_RS22315	0.38	-2.3
5,020,413	+		PFLU_RS22315	0.38	-2.6
5,020,414	-		PFLU_RS22315	0.38	-1.0
5,020,414	-		PFLU_RS22315	0.38	-1.9
5,020,414	-		PFLU_RS22315	0.38	-2.7
5,020,414	-		PFLU_RS22315	0.38	-0.2
5,020,451	+		PFLU_RS22315	0.43	+1.5
5,020,452	-		PFLU_RS22315	0.43	-0.8
5,020,466	+		PFLU_RS22315	0.45	+0.0
5,020,466	+		PFLU_RS22315	0.45	-1.2
5,020,542	+		PFLU_RS22315	0.56	-1.2
5,020,542	+		PFLU_RS22315	0.56	+1.3
5,020,542	+		PFLU_RS22315	0.56	-1.8
5,020,542	+		PFLU_RS22315	0.56	-2.1
5,020,542	+		PFLU_RS22315	0.56	-0.5
5,020,542	+		PFLU_RS22315	0.56	+1.5
5,020,542	+		PFLU_RS22315	0.56	-1.5
5,020,542	+		PFLU_RS22315	0.56	+1.3
5,020,543	-		PFLU_RS22315	0.56	-0.5
5,020,543	-		PFLU_RS22315	0.56	+1.2
5,020,543	-		PFLU_RS22315	0.56	+1.6
5,020,543	-		PFLU_RS22315	0.56	-1.4
5,020,543	-		PFLU_RS22315	0.56	-2.4
5,020,543	-		PFLU_RS22315	0.56	-0.2
5,020,543	-		PFLU_RS22315	0.56	-1.5
5,020,543	-		PFLU_RS22315	0.56	-1.5
5,020,543	-		PFLU_RS22315	0.56	+1.2
5,020,623	+		PFLU_RS22315	0.68	-2.2
5,020,623	+		PFLU_RS22315	0.68	-0.9
5,020,623	+		PFLU_RS22315	0.68	+1.8
5,020,623	+		PFLU_RS22315	0.68	-1.7
5,020,623	+		PFLU_RS22315	0.68	-2.9
5,020,623	+		PFLU_RS22315	0.68	+0.2
5,020,623	+		PFLU_RS22315	0.68	+1.8
5,020,623	+		PFLU_RS22315	0.68	+0.4
5,020,624	-		PFLU_RS22315	0.68	+0.8
5,020,624	-		PFLU_RS22315	0.68	+0.6
5,020,624	-		PFLU_RS22315	0.68	+1.7
5,020,624	-		PFLU_RS22315	0.68	-2.7
5,020,624	-		PFLU_RS22315	0.68	-2.2
5,020,862	+				-2.2
5,020,862	+				+0.2
5,020,862	+				+1.1
5,020,863	-				-3.3
5,020,863	-				+1.8
5,020,871	+				+1.8
5,020,871	+				-1.6
5,020,871	+				-1.2
5,020,872	-				-0.8
5,020,872	-				-0.5
5,020,872	-				+0.6
5,020,872	-				-0.1
5,020,872	-				+0.2
5,020,873	+				-1.5
5,020,873	+				+2.0
5,020,873	+				-1.2
5,020,873	+				+2.0
5,020,873	+				-2.1
5,020,874	-				+1.2
5,020,874	-				+2.4
5,020,874	-				-0.8
5,020,874	-				-0.3
5,020,874	-				+0.2
5,020,934	+				-1.5
5,020,934	+				+0.2
5,020,935	-				-1.0
5,020,935	-				+1.9
5,020,935	-				+1.8
5,020,939	+				+0.0
5,020,939	+				-0.2
5,020,939	+				-2.2
5,020,939	+				-1.7
5,020,939	+				+0.7
5,020,939	+				+1.0
5,020,939	+				+0.1
5,020,939	+				+0.0
5,020,939	+				+0.2
5,020,939	+				-0.5
5,020,939	+				+0.8
5,020,940	-				-0.5
5,020,940	-				-0.4
5,020,940	-				+0.4
5,020,940	-				-1.9
5,020,940	-				-0.7
5,020,940	-				+0.4
5,020,940	-				-1.0
5,020,940	-				+1.5
5,020,940	-				+0.2
5,020,940	-				+0.8
5,020,940	-				-1.8
5,020,940	-				-2.4
5,020,940	-				-0.5
5,020,940	-				-0.0
5,020,940	-				-1.2
5,020,940	-				-0.5
5,020,940	-				+0.0
5,020,940	-				-1.7
5,020,940	-				+0.1
5,020,944	-				+1.9
5,020,944	-				-0.6
5,020,944	-				-2.1
5,020,950	+				-0.8
5,020,950	+				+0.6
5,020,950	+				-2.5
5,020,950	+				-0.1
5,020,950	+				-0.2
5,020,950	+				-1.7
5,020,951	-				+1.4
5,020,951	-				-1.7
5,020,951	-				+0.9
5,020,951	-				-2.9
5,020,951	-				+1.0
5,020,951	-				-3.1
5,020,951	-				+1.4
5,020,952	+				+2.3
5,020,952	+				-2.2
5,020,952	+				-0.9
5,020,952	+				-0.2
5,020,952	+				+1.3
5,020,952	+				+1.2
5,020,952	+				-1.4
5,020,953	-				+1.3
5,020,953	-				-0.7
5,020,953	-				+0.6
5,020,953	-				+0.6
5,020,953	-				+0.1
5,020,953	-				-0.8
5,020,953	-				+1.9
5,020,953	-				-0.2
5,020,953	-				+2.2
5,020,953	-				-1.8
5,020,956	+				-1.2
5,020,956	+				+2.3
5,020,956	+				+1.6
5,020,956	+				+2.5
5,020,956	+				-1.7
5,020,956	+				+1.8
5,020,956	+				+1.4
5,020,956	+				+0.8
5,020,956	+				+0.2
5,020,956	+				+0.8
5,020,956	+				+0.4
5,020,956	+				+1.3
5,020,957	-				-1.8
5,020,957	-				-0.5
5,020,957	-				-1.5
5,020,957	-				-2.2
5,020,957	-				-2.9
5,020,957	-				+0.2
5,020,957	-				+2.4
5,020,957	-				+0.3
5,020,957	-				-2.7
5,020,957	-				-1.8
5,020,982	+				+1.3
5,020,982	+				+1.4
5,020,982	+				-0.8
5,021,160	+		PFLU_RS22320	0.16	-2.8
5,021,160	+		PFLU_RS22320	0.16	+0.8
5,021,160	+		PFLU_RS22320	0.16	+0.8
5,021,161	-		PFLU_RS22320	0.16	-3.1
5,021,161	-		PFLU_RS22320	0.16	-2.5
5,021,161	-		PFLU_RS22320	0.16	+1.4
5,021,275	-		PFLU_RS22320	0.24	-0.1
5,021,292	+		PFLU_RS22320	0.26	+2.6
5,021,292	+		PFLU_RS22320	0.26	+1.7
5,021,293	-		PFLU_RS22320	0.26	+2.7
5,021,293	-		PFLU_RS22320	0.26	-2.1
5,021,346	+		PFLU_RS22320	0.29	+2.1
5,021,346	+		PFLU_RS22320	0.29	-0.2
5,021,347	-		PFLU_RS22320	0.30	+1.4
5,021,397	+		PFLU_RS22320	0.33	-0.8
5,021,397	+		PFLU_RS22320	0.33	-1.0
5,021,397	+		PFLU_RS22320	0.33	-0.2
5,021,397	+		PFLU_RS22320	0.33	+0.1
5,021,397	+		PFLU_RS22320	0.33	-3.3
5,021,397	+		PFLU_RS22320	0.33	+1.0
5,021,398	-		PFLU_RS22320	0.33	-0.8
5,021,398	-		PFLU_RS22320	0.33	+0.2
5,021,398	-		PFLU_RS22320	0.33	-0.8
5,021,398	-		PFLU_RS22320	0.33	-0.8
5,021,398	-		PFLU_RS22320	0.33	-1.7
5,021,398	-		PFLU_RS22320	0.33	-0.8
5,021,398	-		PFLU_RS22320	0.33	+3.2
5,021,398	-		PFLU_RS22320	0.33	+1.6
5,021,398	-		PFLU_RS22320	0.33	+1.6
5,021,450	+		PFLU_RS22320	0.37	+1.7
5,021,450	+		PFLU_RS22320	0.37	+0.7
5,021,451	-		PFLU_RS22320	0.37	+3.0
5,021,451	-		PFLU_RS22320	0.37	+1.2
5,021,493	+		PFLU_RS22320	0.40	-1.0
5,021,493	+		PFLU_RS22320	0.40	+0.6
5,021,493	+		PFLU_RS22320	0.40	-1.7
5,021,494	-		PFLU_RS22320	0.40	+0.6
5,021,494	-		PFLU_RS22320	0.40	+0.1
5,021,494	-		PFLU_RS22320	0.40	-1.4
5,021,494	-		PFLU_RS22320	0.40	+0.6
5,021,494	-		PFLU_RS22320	0.40	+2.1
5,021,503	-		PFLU_RS22320	0.40	+1.4
5,021,503	-		PFLU_RS22320	0.40	-2.0
5,021,503	-		PFLU_RS22320	0.40	-2.4
5,021,503	-		PFLU_RS22320	0.40	+0.8
5,021,538	+		PFLU_RS22320	0.43	-1.5
5,021,539	-		PFLU_RS22320	0.43	+0.2
5,021,546	+		PFLU_RS22320	0.44	-1.6
5,021,546	+		PFLU_RS22320	0.44	+1.3
5,021,554	+		PFLU_RS22320	0.44	-2.4
5,021,592	+		PFLU_RS22320	0.47	+0.8
5,021,592	+		PFLU_RS22320	0.47	-1.0
5,021,592	+		PFLU_RS22320	0.47	+0.1
5,021,592	+		PFLU_RS22320	0.47	-1.6
5,021,592	+		PFLU_RS22320	0.47	+2.6
5,021,592	+		PFLU_RS22320	0.47	+0.9
5,021,592	+		PFLU_RS22320	0.47	-0.6
5,021,592	+		PFLU_RS22320	0.47	-0.5
5,021,592	+		PFLU_RS22320	0.47	-1.4
5,021,592	+		PFLU_RS22320	0.47	-0.0
5,021,592	+		PFLU_RS22320	0.47	-0.8
5,021,592	+		PFLU_RS22320	0.47	-1.1
5,021,592	+		PFLU_RS22320	0.47	+1.3
5,021,592	+		PFLU_RS22320	0.47	+2.0
5,021,592	+		PFLU_RS22320	0.47	+0.1
5,021,592	+		PFLU_RS22320	0.47	-1.8
5,021,592	+		PFLU_RS22320	0.47	+1.6
5,021,592	+		PFLU_RS22320	0.47	-2.0
5,021,592	+		PFLU_RS22320	0.47	-0.4
5,021,592	+		PFLU_RS22320	0.47	-0.8
5,021,592	+		PFLU_RS22320	0.47	-1.9
5,021,592	+		PFLU_RS22320	0.47	-1.5
5,021,593	-		PFLU_RS22320	0.47	-0.1
5,021,593	-		PFLU_RS22320	0.47	+1.5
5,021,593	-		PFLU_RS22320	0.47	+1.6
5,021,593	-		PFLU_RS22320	0.47	-0.3
5,021,593	-		PFLU_RS22320	0.47	-0.5
5,021,593	-		PFLU_RS22320	0.47	+0.5
5,021,593	-		PFLU_RS22320	0.47	-0.4
5,021,593	-		PFLU_RS22320	0.47	-3.3
5,021,593	-		PFLU_RS22320	0.47	+0.1
5,021,593	-		PFLU_RS22320	0.47	+1.5
5,021,593	-		PFLU_RS22320	0.47	+0.4
5,021,593	-		PFLU_RS22320	0.47	-0.6
5,021,593	-		PFLU_RS22320	0.47	-2.0
5,021,593	-		PFLU_RS22320	0.47	-0.7
5,021,593	-		PFLU_RS22320	0.47	+0.8
5,021,593	-		PFLU_RS22320	0.47	+0.7
5,021,593	-		PFLU_RS22320	0.47	+0.2
5,021,593	-		PFLU_RS22320	0.47	+1.8
5,021,593	-		PFLU_RS22320	0.47	+0.4
5,021,593	-		PFLU_RS22320	0.47	+0.6
5,021,593	-		PFLU_RS22320	0.47	-1.0
5,021,593	-		PFLU_RS22320	0.47	-0.1
5,021,593	-		PFLU_RS22320	0.47	-1.5
5,021,593	-		PFLU_RS22320	0.47	-1.7
5,021,593	-		PFLU_RS22320	0.47	-1.7
5,021,593	-		PFLU_RS22320	0.47	-0.4
5,021,595	+		PFLU_RS22320	0.47	+1.2
5,021,595	+		PFLU_RS22320	0.47	-1.9
5,021,595	+		PFLU_RS22320	0.47	+1.2
5,021,595	+		PFLU_RS22320	0.47	-0.8
5,021,595	+		PFLU_RS22320	0.47	+0.1
5,021,595	+		PFLU_RS22320	0.47	+3.3
5,021,595	+		PFLU_RS22320	0.47	+0.0
5,021,595	+		PFLU_RS22320	0.47	-0.2
5,021,596	-		PFLU_RS22320	0.47	+1.0
5,021,596	-		PFLU_RS22320	0.47	-0.2
5,021,596	-		PFLU_RS22320	0.47	-0.2
5,021,596	-		PFLU_RS22320	0.47	-0.8
5,021,596	-		PFLU_RS22320	0.47	+0.9
5,021,596	-		PFLU_RS22320	0.47	+0.5
5,021,596	-		PFLU_RS22320	0.47	+1.8
5,021,596	-		PFLU_RS22320	0.47	+1.3
5,021,596	-		PFLU_RS22320	0.47	+1.5
5,021,596	-		PFLU_RS22320	0.47	-0.8
5,021,596	-		PFLU_RS22320	0.47	-2.3
5,021,596	-		PFLU_RS22320	0.47	+0.8
5,021,628	+		PFLU_RS22320	0.49	+2.4
5,021,628	+		PFLU_RS22320	0.49	-1.4
5,021,628	+		PFLU_RS22320	0.49	+0.4
5,021,628	+		PFLU_RS22320	0.49	-2.1
5,021,629	-		PFLU_RS22320	0.49	-0.8
5,021,629	-		PFLU_RS22320	0.49	+0.3
5,021,629	-		PFLU_RS22320	0.49	-1.2
5,021,629	-		PFLU_RS22320	0.49	+0.2
5,021,669	+		PFLU_RS22320	0.52	-0.9
5,021,669	+		PFLU_RS22320	0.52	+1.1
5,021,670	-		PFLU_RS22320	0.52	+1.2
5,021,676	+		PFLU_RS22320	0.53	+0.8
5,021,676	+		PFLU_RS22320	0.53	-0.5
5,021,677	-		PFLU_RS22320	0.53	-1.4
5,021,677	-		PFLU_RS22320	0.53	+0.1
5,021,677	-		PFLU_RS22320	0.53	-2.4
5,021,677	-		PFLU_RS22320	0.53	+2.2
5,021,677	-		PFLU_RS22320	0.53	-3.0
5,021,677	-		PFLU_RS22320	0.53	-0.1
5,021,677	-		PFLU_RS22320	0.53	-0.2
5,021,677	-		PFLU_RS22320	0.53	+0.5
5,021,706	+		PFLU_RS22320	0.55	+1.7
5,021,706	+		PFLU_RS22320	0.55	-1.0
5,021,706	+		PFLU_RS22320	0.55	+1.5
5,021,706	+		PFLU_RS22320	0.55	+1.8
5,021,706	+		PFLU_RS22320	0.55	+0.6
5,021,707	-		PFLU_RS22320	0.55	+0.4
5,021,822	+		PFLU_RS22320	0.63	-1.8
5,021,822	+		PFLU_RS22320	0.63	-0.7
5,021,822	+		PFLU_RS22320	0.63	-0.2
5,021,822	+		PFLU_RS22320	0.63	-0.5