Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS15550

Experiment: Choline chloride 10 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline chloride 10 mM (C)
3,479,882	+				-0.9
3,479,882	+				+0.2
3,479,883	-				-0.2
3,479,883	-				+0.7
3,479,905	+				-2.4
3,479,905	+				+0.9
3,479,906	-				-3.7
3,479,906	-				-1.5
3,479,906	-				-1.0
3,479,906	-				+1.2
3,479,917	+				+0.7
3,479,917	+				-1.5
3,479,917	+				+0.3
3,479,917	+				-1.3
3,479,917	+				-2.4
3,479,917	+				-1.7
3,479,918	-				-1.3
3,479,918	-				+0.2
3,479,918	-				-1.7
3,479,918	-				-1.6
3,479,918	-				+0.1
3,479,918	-				+1.2
3,479,938	+				+1.2
3,479,938	+				-1.0
3,479,938	+				+0.6
3,479,938	+				+0.0
3,479,938	+				+1.9
3,479,939	-				+0.8
3,479,939	-				+1.3
3,479,939	-				+3.8
3,479,939	-				-0.0
3,479,939	-				+1.5
3,479,950	+				-2.9
3,479,950	+				-0.3
3,479,960	+				-0.6
3,479,992	+				+0.3
3,479,993	-				+0.4
3,479,993	-				-0.3
3,480,033	-				-1.0
3,480,033	-				+1.1
3,480,033	-				-0.9
3,480,857	-				-1.8
3,480,857	-				-1.3
3,480,857	-				-1.0
3,480,857	-				+1.2
3,480,857	-				-0.3
3,480,857	-				+2.3
3,480,857	-				-1.5
3,480,857	-				-3.1
3,480,857	-				+0.1
3,480,857	-				+0.0
3,480,857	-				+2.1
3,480,857	-				+0.3
3,480,897	+				+1.9
3,480,897	+				+1.3
3,480,897	+				-0.3
3,480,897	+				-1.8
3,480,897	+				+2.4
3,480,897	+				+1.3
3,480,897	+				+2.3
3,480,897	+				+3.9
3,480,898	-				-2.7
3,480,898	-				-1.7
3,480,898	-				+2.7
3,480,898	-				-1.8
3,480,898	-				+0.2
3,480,898	-				-0.3
3,480,898	-				+1.2
3,480,898	-				+0.1
3,480,898	-				+0.9
3,480,898	-				+0.4
3,480,898	-				-2.6
3,480,901	+				-1.0
3,480,901	+				+3.5
3,480,901	+				-2.0
3,480,901	+				+0.7
3,480,901	+				-0.1
3,480,901	+				+0.3
3,480,901	+				+2.3
3,480,901	+				+0.6
3,480,902	-				+0.3
3,480,902	-				+0.2
3,480,902	-				-0.3
3,480,902	-				-1.5
3,480,902	-				+1.0
3,480,902	-				-1.5
3,480,902	-				+2.8
3,480,902	-				-0.8
3,480,902	-				-1.3
3,480,902	-				+0.6
3,480,902	-				+0.8
3,480,902	-				+2.1
3,480,902	-				+1.0
3,480,902	-				-0.2
3,480,902	-				+0.5
3,480,902	-				-2.5
3,480,904	-				+1.1
3,480,904	-				-0.7
3,480,904	-				-1.3
3,480,979	+				+0.5
3,480,979	+				-2.6
3,480,979	+				+0.1
3,480,979	+				+1.1
3,480,980	-				-2.4
3,481,080	-				-0.3
3,481,096	+				+0.3
3,481,096	+				+2.4
3,481,096	+				-0.3
3,481,096	+				-3.3
3,481,096	+				+1.7
3,481,096	+				-1.7
3,481,097	-				-1.5
3,481,097	-				+0.3
3,481,097	-				+0.5
3,481,112	+				+2.0
3,481,112	+				+1.9
3,481,112	+				+1.3
3,481,143	-				+0.6
3,481,153	+				-2.4
3,481,172	-				-3.1
3,481,290	+				-0.7
3,481,290	+				+2.8
3,481,290	+				+0.9
3,481,290	+				+3.4
3,481,290	+				+2.2
3,481,290	+				+1.6
3,481,290	+				+3.0
3,481,290	+				+1.0
3,481,290	+				+0.7
3,481,290	+				+2.4
3,481,290	+				+1.8
3,481,291	-				+1.1
3,481,291	-				-2.0
3,481,291	-				+1.4
3,481,291	-				+1.0
3,481,291	-				+1.5
3,481,291	-				-0.7
3,481,291	-				-1.7
3,481,291	-				-2.0
3,481,291	-				+1.2
3,481,291	-				-1.7
3,481,291	-				-0.3
3,481,291	-				+2.5
3,481,291	-				+0.8
3,481,291	-				+1.2
3,481,291	-				-0.3
3,481,291	-				+0.6
3,481,291	-				-1.0
3,481,291	-				+0.6
3,481,297	+				+0.0
3,481,297	+				-0.8
3,481,297	+				+1.4
3,481,297	+				+0.8
3,481,297	+				+0.2
3,481,297	+				+1.2
3,481,297	+				+1.3
3,481,297	+				+1.3
3,481,297	+				+0.7
3,481,297	+				-0.1
3,481,297	+				+1.6
3,481,297	+				-1.5
3,481,298	-				-0.7
3,481,298	-				+2.1
3,481,298	-				-0.1
3,481,298	-				+2.5
3,481,298	-				-0.9
3,481,298	-				+1.3
3,481,298	-				-1.8
3,481,298	-				-1.7
3,481,298	-				+0.6
3,481,298	-				+1.0
3,481,298	-				+1.2
3,481,330	+				-1.3
3,481,331	-				-1.7
3,481,464	+				+2.3
3,481,464	+				-2.1
3,481,464	+				-0.2
3,481,465	-				-2.5
3,481,465	-				+1.3
3,481,465	-				-1.7
3,481,465	-				+0.0
3,481,465	-				+1.3
3,481,465	-				+0.8
3,481,465	-				+1.9
3,481,465	-				+0.1
3,481,465	-				+2.9
3,481,465	-				+2.2
3,481,465	-				-0.7
3,481,525	+				+2.0
3,481,525	+				+2.8
3,481,526	-				+1.4
3,481,619	-				+2.5
3,481,834	+				+1.3
3,481,856	-				-1.3
3,481,877	+				+2.5
3,481,878	-				+1.2
3,481,935	+				+2.9
3,481,935	+				+2.9
3,481,936	-				+0.4
3,481,936	-				-2.3
3,481,936	-				+3.4
3,481,992	+				+1.1
3,481,993	-				+0.6
3,481,993	-				+0.0
3,482,011	-				-0.6
3,482,011	-				+0.6
3,482,011	-				-2.4
3,482,095	-				-0.3
3,482,131	-		PFLU_RS15550	0.10	+0.1
3,482,159	+		PFLU_RS15550	0.11	+1.0
3,482,199	+		PFLU_RS15550	0.11	+0.5
3,482,199	+		PFLU_RS15550	0.11	+1.9
3,482,199	+		PFLU_RS15550	0.11	+1.3
3,482,199	+		PFLU_RS15550	0.11	+1.5
3,482,199	+		PFLU_RS15550	0.11	+2.2
3,482,200	-		PFLU_RS15550	0.11	-0.3
3,482,200	-		PFLU_RS15550	0.11	+0.5
3,482,200	-		PFLU_RS15550	0.11	-0.1
3,482,200	-		PFLU_RS15550	0.11	+1.5
3,482,200	-		PFLU_RS15550	0.11	+0.1
3,482,200	-		PFLU_RS15550	0.11	-1.3
3,482,217	+		PFLU_RS15550	0.11	-1.7
3,482,217	+		PFLU_RS15550	0.11	+1.3
3,482,223	+		PFLU_RS15550	0.11	-2.1
3,482,223	+		PFLU_RS15550	0.11	+0.3
3,482,223	+		PFLU_RS15550	0.11	+0.0
3,482,223	+		PFLU_RS15550	0.11	+1.8
3,482,223	+		PFLU_RS15550	0.11	-1.8
3,482,223	+		PFLU_RS15550	0.11	+2.0
3,482,223	+		PFLU_RS15550	0.11	+2.9
3,482,224	-		PFLU_RS15550	0.11	+1.0
3,482,224	-		PFLU_RS15550	0.11	+1.6
3,482,224	-		PFLU_RS15550	0.11	+1.0
3,482,235	+		PFLU_RS15550	0.11	+0.2
3,482,236	-		PFLU_RS15550	0.11	+0.2
3,482,236	-		PFLU_RS15550	0.11	+1.3
3,482,236	-		PFLU_RS15550	0.11	-1.8
3,482,236	-		PFLU_RS15550	0.11	+2.0
3,482,376	+		PFLU_RS15550	0.12	-0.1
3,482,376	+		PFLU_RS15550	0.12	+1.5
3,482,546	-		PFLU_RS15550	0.14	+0.9
3,482,547	+		PFLU_RS15550	0.14	+0.0
3,482,547	+		PFLU_RS15550	0.14	+0.5
3,482,547	+		PFLU_RS15550	0.14	+2.8
3,482,547	+		PFLU_RS15550	0.14	-0.3
3,482,547	+		PFLU_RS15550	0.14	+2.5
3,482,547	+		PFLU_RS15550	0.14	+1.2
3,482,548	-		PFLU_RS15550	0.14	-0.1
3,482,548	-		PFLU_RS15550	0.14	-2.0
3,482,548	-		PFLU_RS15550	0.14	-1.0
3,482,548	-		PFLU_RS15550	0.14	+1.7
3,482,548	-		PFLU_RS15550	0.14	+1.3
3,482,548	-		PFLU_RS15550	0.14	-2.3
3,482,767	+		PFLU_RS15550	0.15	-2.4
3,482,780	-		PFLU_RS15550	0.16	+0.3
3,482,823	+		PFLU_RS15550	0.16	-1.3
3,482,823	+		PFLU_RS15550	0.16	+1.3
3,482,824	-		PFLU_RS15550	0.16	+1.7
3,482,824	-		PFLU_RS15550	0.16	+1.1
3,482,824	-		PFLU_RS15550	0.16	+2.0
3,482,913	+		PFLU_RS15550	0.17	+0.0
3,482,913	+		PFLU_RS15550	0.17	+1.5
3,482,914	-		PFLU_RS15550	0.17	-1.3
3,482,994	-		PFLU_RS15550	0.17	+0.9
3,483,168	+		PFLU_RS15550	0.19	-1.8
3,483,168	+		PFLU_RS15550	0.19	-0.1
3,483,168	+		PFLU_RS15550	0.19	-1.7
3,483,169	-		PFLU_RS15550	0.19	-0.6
3,483,169	-		PFLU_RS15550	0.19	+2.6
3,483,169	-		PFLU_RS15550	0.19	-2.7
3,483,169	-		PFLU_RS15550	0.19	-1.4
3,483,169	-		PFLU_RS15550	0.19	+1.4
3,483,404	-		PFLU_RS15550	0.21	+2.4
3,483,445	+		PFLU_RS15550	0.21	+0.9
3,483,446	-		PFLU_RS15550	0.21	-0.7
3,483,484	+		PFLU_RS15550	0.21	+2.1
3,483,484	+		PFLU_RS15550	0.21	+1.3
3,483,484	+		PFLU_RS15550	0.21	+2.8
3,483,484	+		PFLU_RS15550	0.21	+2.1
3,483,485	-		PFLU_RS15550	0.21	+1.8
3,483,485	-		PFLU_RS15550	0.21	-1.8
3,483,485	-		PFLU_RS15550	0.21	+0.9
3,483,485	-		PFLU_RS15550	0.21	+1.1
3,483,543	+		PFLU_RS15550	0.22	+2.3
3,483,675	+		PFLU_RS15550	0.23	-1.7
3,483,676	-		PFLU_RS15550	0.23	-1.0
3,483,676	-		PFLU_RS15550	0.23	+1.3
3,483,735	+		PFLU_RS15550	0.23	-0.7
3,483,736	-		PFLU_RS15550	0.23	-0.2
3,483,785	-		PFLU_RS15550	0.24	+2.2
3,483,824	-		PFLU_RS15550	0.24	+2.7
3,483,879	+		PFLU_RS15550	0.24	+1.3
3,483,879	+		PFLU_RS15550	0.24	+0.1
3,483,880	-		PFLU_RS15550	0.24	+2.6
3,483,979	+		PFLU_RS15550	0.25	+1.3
3,483,979	+		PFLU_RS15550	0.25	+3.0
3,484,002	-		PFLU_RS15550	0.25	-1.0
3,484,117	+		PFLU_RS15550	0.26	+2.8
3,484,140	+		PFLU_RS15550	0.27	+5.8
3,484,140	+		PFLU_RS15550	0.27	+1.2
3,484,140	+		PFLU_RS15550	0.27	+0.0
3,484,140	+		PFLU_RS15550	0.27	+1.0
3,484,140	+		PFLU_RS15550	0.27	-1.4
3,484,140	+		PFLU_RS15550	0.27	+0.1
3,484,140	+		PFLU_RS15550	0.27	+0.8
3,484,141	-		PFLU_RS15550	0.27	+1.8
3,484,141	-		PFLU_RS15550	0.27	+0.2
3,484,141	-		PFLU_RS15550	0.27	+0.1
3,484,141	-		PFLU_RS15550	0.27	+0.5
3,484,141	-		PFLU_RS15550	0.27	-0.3
3,484,165	+		PFLU_RS15550	0.27	-2.5
3,484,165	+		PFLU_RS15550	0.27	+1.1
3,484,227	+		PFLU_RS15550	0.27	-1.5
3,484,227	+		PFLU_RS15550	0.27	+0.0
3,484,227	+		PFLU_RS15550	0.27	+2.0
3,484,227	+		PFLU_RS15550	0.27	-0.3
3,484,228	-		PFLU_RS15550	0.27	+0.5
3,484,228	-		PFLU_RS15550	0.27	+1.1
3,484,228	-		PFLU_RS15550	0.27	-1.0
3,484,228	-		PFLU_RS15550	0.27	+2.1
3,484,243	+		PFLU_RS15550	0.27	-0.7
3,484,243	+		PFLU_RS15550	0.27	+0.8
3,484,243	+		PFLU_RS15550	0.27	+1.0
3,484,243	+		PFLU_RS15550	0.27	+1.3
3,484,243	+		PFLU_RS15550	0.27	-0.3
3,484,243	+		PFLU_RS15550	0.27	+0.0
3,484,243	+		PFLU_RS15550	0.27	+0.8
3,484,243	+		PFLU_RS15550	0.27	+3.3
3,484,244	-		PFLU_RS15550	0.27	+1.1
3,484,244	-		PFLU_RS15550	0.27	+0.2
3,484,244	-		PFLU_RS15550	0.27	-2.1
3,484,244	-		PFLU_RS15550	0.27	-0.8
3,484,244	-		PFLU_RS15550	0.27	-1.0
3,484,244	-		PFLU_RS15550	0.27	-1.5
3,484,244	-		PFLU_RS15550	0.27	+1.0
3,484,244	-		PFLU_RS15550	0.27	-0.3
3,484,245	+		PFLU_RS15550	0.27	-1.7
3,484,245	+		PFLU_RS15550	0.27	-0.1
3,484,246	-		PFLU_RS15550	0.27	+1.7
3,484,246	-		PFLU_RS15550	0.27	+1.3
3,484,260	+		PFLU_RS15550	0.28	+1.1
3,484,260	+		PFLU_RS15550	0.28	-1.7
3,484,420	+		PFLU_RS15550	0.29	+2.2
3,484,427	-		PFLU_RS15550	0.29	-0.5
3,484,563	+		PFLU_RS15550	0.30	-0.7
3,484,563	+		PFLU_RS15550	0.30	+1.0
3,484,564	-		PFLU_RS15550	0.30	-0.3
3,484,564	-		PFLU_RS15550	0.30	+1.3
3,484,716	+		PFLU_RS15550	0.31	+1.2
3,484,716	+		PFLU_RS15550	0.31	+0.6
3,484,716	+		PFLU_RS15550	0.31	-0.5
3,484,717	-		PFLU_RS15550	0.31	+0.3
3,484,717	-		PFLU_RS15550	0.31	+0.8
3,484,717	-		PFLU_RS15550	0.31	-1.0
3,484,717	-		PFLU_RS15550	0.31	+1.2
3,484,722	+		PFLU_RS15550	0.31	-0.7
3,484,722	+		PFLU_RS15550	0.31	+2.9
3,484,722	+		PFLU_RS15550	0.31	+6.2
3,484,722	+		PFLU_RS15550	0.31	+3.4
3,484,723	-		PFLU_RS15550	0.31	-0.7
3,484,806	+		PFLU_RS15550	0.32	+0.5
3,484,848	+		PFLU_RS15550	0.32	+1.8
3,484,849	-		PFLU_RS15550	0.32	+0.9
3,484,869	+		PFLU_RS15550	0.32	+0.3
3,484,870	-		PFLU_RS15550	0.32	+0.0
3,484,926	+		PFLU_RS15550	0.33	-1.0
3,484,926	+		PFLU_RS15550	0.33	+0.6
3,484,926	+		PFLU_RS15550	0.33	+0.5
3,485,394	+		PFLU_RS15550	0.37	-0.3
3,485,516	+		PFLU_RS15550	0.38	+2.7
3,485,745	+		PFLU_RS15550	0.40	+2.6
3,485,745	+		PFLU_RS15550	0.40	-0.3
3,485,754	+		PFLU_RS15550	0.40	+2.6
3,485,754	+		PFLU_RS15550	0.40	+2.1
3,485,755	-		PFLU_RS15550	0.40	+1.0
3,485,755	-		PFLU_RS15550	0.40	+1.5
3,485,755	-		PFLU_RS15550	0.40	+1.9
3,485,800	+		PFLU_RS15550	0.40	-0.4
3,485,809	+		PFLU_RS15550	0.40	+0.5
3,485,810	-		PFLU_RS15550	0.40	-1.8
3,485,810	-		PFLU_RS15550	0.40	+0.1
3,485,825	-		PFLU_RS15550	0.40	+1.2
3,485,825	-		PFLU_RS15550	0.40	+3.4
3,485,826	+		PFLU_RS15550	0.40	-1.8
3,485,826	+		PFLU_RS15550	0.40	+2.6
3,485,827	-		PFLU_RS15550	0.40	+1.3
3,485,827	-		PFLU_RS15550	0.40	+1.2
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3,487,219	-		PFLU_RS15550	0.51	+1.1
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3,487,886	-		PFLU_RS15550	0.57	+0.1
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