Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS09100

Experiment: Choline chloride 10 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline chloride 10 mM (C)
2,016,174	-		PFLU_RS09095	0.39	-1.1
2,016,347	+		PFLU_RS09095	0.55	-1.9
2,016,347	+		PFLU_RS09095	0.55	-1.0
2,016,347	+		PFLU_RS09095	0.55	+1.2
2,016,347	+		PFLU_RS09095	0.55	-1.9
2,016,347	+		PFLU_RS09095	0.55	-0.7
2,016,347	+		PFLU_RS09095	0.55	-2.0
2,016,347	+		PFLU_RS09095	0.55	+0.2
2,016,347	+		PFLU_RS09095	0.55	+0.1
2,016,347	+		PFLU_RS09095	0.55	+0.4
2,016,347	+		PFLU_RS09095	0.55	+0.7
2,016,347	+		PFLU_RS09095	0.55	-1.4
2,016,347	+		PFLU_RS09095	0.55	+0.7
2,016,347	+		PFLU_RS09095	0.55	+1.1
2,016,347	+		PFLU_RS09095	0.55	+1.8
2,016,347	+		PFLU_RS09095	0.55	+0.7
2,016,348	-		PFLU_RS09095	0.55	+2.2
2,016,348	-		PFLU_RS09095	0.55	-1.5
2,016,348	-		PFLU_RS09095	0.55	+0.7
2,016,348	-		PFLU_RS09095	0.55	+1.1
2,016,348	-		PFLU_RS09095	0.55	-0.7
2,016,348	-		PFLU_RS09095	0.55	+0.2
2,016,348	-		PFLU_RS09095	0.55	+0.2
2,016,348	-		PFLU_RS09095	0.55	-1.8
2,016,348	-		PFLU_RS09095	0.55	-1.5
2,016,348	-		PFLU_RS09095	0.55	+0.3
2,016,348	-		PFLU_RS09095	0.55	-2.9
2,016,348	-		PFLU_RS09095	0.55	-0.2
2,016,348	-		PFLU_RS09095	0.55	+1.0
2,016,563	+		PFLU_RS09095	0.76	+0.8
2,016,563	+		PFLU_RS09095	0.76	-1.4
2,016,563	+		PFLU_RS09095	0.76	-0.3
2,016,563	+		PFLU_RS09095	0.76	-1.1
2,016,563	+		PFLU_RS09095	0.76	-1.4
2,016,563	+		PFLU_RS09095	0.76	+1.3
2,016,563	+		PFLU_RS09095	0.76	-1.3
2,016,564	-		PFLU_RS09095	0.76	+0.8
2,016,564	-		PFLU_RS09095	0.76	-1.8
2,016,564	-		PFLU_RS09095	0.76	-2.1
2,016,564	-		PFLU_RS09095	0.76	+0.4
2,016,569	+		PFLU_RS09095	0.76	-1.3
2,016,569	+		PFLU_RS09095	0.76	-1.8
2,016,569	+		PFLU_RS09095	0.76	+1.9
2,016,569	+		PFLU_RS09095	0.76	+0.8
2,016,569	+		PFLU_RS09095	0.76	+0.7
2,016,569	+		PFLU_RS09095	0.76	-2.2
2,016,569	+		PFLU_RS09095	0.76	-0.3
2,016,570	-		PFLU_RS09095	0.76	+1.2
2,016,570	-		PFLU_RS09095	0.76	-1.1
2,016,570	-		PFLU_RS09095	0.76	+1.4
2,016,570	-		PFLU_RS09095	0.76	-0.7
2,016,570	-		PFLU_RS09095	0.76	-1.5
2,016,635	+		PFLU_RS09095	0.82	-0.6
2,016,635	+		PFLU_RS09095	0.82	+0.7
2,016,635	+		PFLU_RS09095	0.82	+2.2
2,016,635	+		PFLU_RS09095	0.82	+1.4
2,016,635	+		PFLU_RS09095	0.82	+1.3
2,016,636	-		PFLU_RS09095	0.83	-0.0
2,016,636	-		PFLU_RS09095	0.83	+0.7
2,016,636	-		PFLU_RS09095	0.83	+1.2
2,016,755	+				+0.5
2,016,756	-				+1.0
2,016,756	-				-0.8
2,016,756	-				+0.4
2,016,756	-				+0.7
2,016,819	-				+1.7
2,017,029	+		PFLU_RS09100	0.15	+4.6
2,017,029	+		PFLU_RS09100	0.15	+2.1
2,017,029	+		PFLU_RS09100	0.15	+0.4
2,017,030	-		PFLU_RS09100	0.15	-2.4
2,017,146	+		PFLU_RS09100	0.26	+0.3
2,017,335	+		PFLU_RS09100	0.44	+1.9
2,017,335	+		PFLU_RS09100	0.44	-2.6
2,017,335	+		PFLU_RS09100	0.44	+1.7
2,017,335	+		PFLU_RS09100	0.44	+2.1
2,017,335	+		PFLU_RS09100	0.44	+1.0
2,017,336	-		PFLU_RS09100	0.44	+1.9
2,017,336	-		PFLU_RS09100	0.44	+1.2
2,017,336	-		PFLU_RS09100	0.44	+0.1
2,017,336	-		PFLU_RS09100	0.44	+1.9
2,017,336	-		PFLU_RS09100	0.44	-0.0
2,017,336	-		PFLU_RS09100	0.44	+1.8
2,017,336	-		PFLU_RS09100	0.44	+1.8
2,017,511	-		PFLU_RS09100	0.61	+2.7
2,017,940	+				+0.1
2,017,940	+				+0.7
2,017,940	+				+0.1
2,017,940	+				-1.7
2,017,941	-				-0.9
2,017,941	-				-2.0
2,017,941	-				-1.2
2,017,941	-				-2.6
2,018,155	+		PFLU_RS09105	0.32	+0.1
2,018,155	+		PFLU_RS09105	0.32	-3.0
2,018,155	+		PFLU_RS09105	0.32	-2.0
2,018,155	+		PFLU_RS09105	0.32	+0.7
2,018,156	-		PFLU_RS09105	0.32	-1.3
2,018,156	-		PFLU_RS09105	0.32	-0.5
2,018,156	-		PFLU_RS09105	0.32	+0.5
2,018,188	+		PFLU_RS09105	0.36	+1.7
2,018,188	+		PFLU_RS09105	0.36	+1.3
2,018,188	+		PFLU_RS09105	0.36	+0.1
2,018,188	+		PFLU_RS09105	0.36	-2.4
2,018,188	+		PFLU_RS09105	0.36	-2.7
2,018,188	+		PFLU_RS09105	0.36	+0.6
2,018,189	-		PFLU_RS09105	0.36	-2.2
2,018,189	-		PFLU_RS09105	0.36	-1.0
2,018,189	-		PFLU_RS09105	0.36	-0.3
2,018,189	-		PFLU_RS09105	0.36	-2.6
2,018,189	-		PFLU_RS09105	0.36	+0.9
2,018,189	-		PFLU_RS09105	0.36	+2.3
2,018,315	+		PFLU_RS09105	0.53	-0.3
2,018,315	+		PFLU_RS09105	0.53	-0.2
2,018,315	+		PFLU_RS09105	0.53	-2.3
2,018,315	+		PFLU_RS09105	0.53	-0.7
2,018,315	+		PFLU_RS09105	0.53	-1.3
2,018,315	+		PFLU_RS09105	0.53	+0.2
2,018,315	+		PFLU_RS09105	0.53	-0.7
2,018,315	+		PFLU_RS09105	0.53	+0.1
2,018,315	+		PFLU_RS09105	0.53	-1.1
2,018,315	+		PFLU_RS09105	0.53	+0.9
2,018,315	+		PFLU_RS09105	0.53	-2.8
2,018,315	+		PFLU_RS09105	0.53	+0.1
2,018,316	-		PFLU_RS09105	0.53	+1.5
2,018,316	-		PFLU_RS09105	0.53	-2.9
2,018,316	-		PFLU_RS09105	0.53	+3.0
2,018,316	-		PFLU_RS09105	0.53	+1.0
2,018,316	-		PFLU_RS09105	0.53	-1.8
2,018,316	-		PFLU_RS09105	0.53	-1.3
2,018,316	-		PFLU_RS09105	0.53	+0.3
2,018,316	-		PFLU_RS09105	0.53	+0.7
2,018,316	-		PFLU_RS09105	0.53	+0.1
2,018,316	-		PFLU_RS09105	0.53	-0.3
2,018,316	-		PFLU_RS09105	0.53	+0.4
2,018,316	-		PFLU_RS09105	0.53	-1.8
2,018,316	-		PFLU_RS09105	0.53	+0.7
2,018,316	-		PFLU_RS09105	0.53	-0.3
2,018,316	-		PFLU_RS09105	0.53	+0.9
2,018,316	-		PFLU_RS09105	0.53	+0.7
2,018,316	-		PFLU_RS09105	0.53	-1.7
2,018,549	+		PFLU_RS09105	0.83	+0.5
2,018,549	+		PFLU_RS09105	0.83	-1.8
2,018,550	-		PFLU_RS09105	0.83	-1.7
2,018,676	+				-2.0
2,018,676	+				-1.9
2,018,676	+				+1.1
2,018,676	+				-0.3
2,018,676	+				-0.3
2,018,676	+				+1.2
2,018,677	-				-2.3
2,018,677	-				+0.5
2,018,677	-				+1.3
2,018,677	-				-2.4
2,018,677	-				+0.2
2,018,677	-				+1.0
2,018,677	-				+0.0
2,018,677	-				+0.7
2,018,677	-				+0.7
2,018,677	-				+1.7
2,018,711	+				-2.1
2,018,711	+				+1.4
2,018,712	-				-0.7
2,018,712	-				+0.6
2,018,767	-				-3.8
2,018,801	+				-1.6
2,018,802	-				+1.2
2,018,802	-				-2.3
2,018,855	+				+2.3
2,018,855	+				+0.5
2,018,856	-				+1.3
2,018,856	-				-1.5
2,018,856	-				+2.1
2,018,856	-				-2.7
2,018,859	+				-2.3
2,018,859	+				+1.3
2,018,859	+				-0.3
2,018,860	-				-1.3
2,018,860	-				+1.7
2,018,897	-				-1.8