Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS08860

Experiment: Choline chloride 10 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline chloride 10 mM (C)
1,963,509	+		PFLU_RS08855	0.49	+2.2
1,963,614	+		PFLU_RS08855	0.58	+1.7
1,963,614	+		PFLU_RS08855	0.58	-0.3
1,963,614	+		PFLU_RS08855	0.58	+1.7
1,963,614	+		PFLU_RS08855	0.58	+0.2
1,963,614	+		PFLU_RS08855	0.58	-0.7
1,963,614	+		PFLU_RS08855	0.58	+0.8
1,963,614	+		PFLU_RS08855	0.58	+3.9
1,963,614	+		PFLU_RS08855	0.58	+2.2
1,963,614	+		PFLU_RS08855	0.58	-2.8
1,963,615	-		PFLU_RS08855	0.58	-1.5
1,963,615	-		PFLU_RS08855	0.58	+0.2
1,963,615	-		PFLU_RS08855	0.58	-0.9
1,963,615	-		PFLU_RS08855	0.58	-1.9
1,963,615	-		PFLU_RS08855	0.58	-0.7
1,963,615	-		PFLU_RS08855	0.58	-1.7
1,963,620	+		PFLU_RS08855	0.58	+0.5
1,963,620	+		PFLU_RS08855	0.58	+0.7
1,963,620	+		PFLU_RS08855	0.58	+0.7
1,963,620	+		PFLU_RS08855	0.58	-0.8
1,963,620	+		PFLU_RS08855	0.58	+2.1
1,963,620	+		PFLU_RS08855	0.58	+1.5
1,963,620	+		PFLU_RS08855	0.58	+0.1
1,963,620	+		PFLU_RS08855	0.58	-0.6
1,963,620	+		PFLU_RS08855	0.58	-1.7
1,963,620	+		PFLU_RS08855	0.58	+0.7
1,963,620	+		PFLU_RS08855	0.58	-0.1
1,963,620	+		PFLU_RS08855	0.58	+1.7
1,963,621	-		PFLU_RS08855	0.58	+0.1
1,963,621	-		PFLU_RS08855	0.58	-1.3
1,963,621	-		PFLU_RS08855	0.58	+0.2
1,963,621	-		PFLU_RS08855	0.58	+0.3
1,963,621	-		PFLU_RS08855	0.58	+0.4
1,963,621	-		PFLU_RS08855	0.58	-2.0
1,963,621	-		PFLU_RS08855	0.58	+1.2
1,963,621	-		PFLU_RS08855	0.58	-2.0
1,963,621	-		PFLU_RS08855	0.58	+0.9
1,964,070	+				-1.1
1,964,071	-				-2.6
1,964,155	+				+1.4
1,964,156	-				-0.3
1,964,156	-				+1.0
1,964,156	-				-0.7
1,964,181	+				-1.7
1,964,182	-				+2.1
1,964,182	-				-1.9
1,964,184	+				-1.7
1,964,184	+				+1.6
1,964,184	+				-1.5
1,964,185	-				-0.7
1,964,185	-				+0.9
1,964,185	-				-0.9
1,964,185	-				+0.2
1,964,185	-				-1.5
1,964,185	-				-2.1
1,964,215	+				+2.5
1,964,215	+				-2.7
1,964,215	+				-1.8
1,964,215	+				-0.7
1,964,215	+				+0.7
1,964,216	-				+0.7
1,964,216	-				-1.8
1,964,216	-				+1.0
1,964,216	-				+1.2
1,964,219	+				-0.7
1,964,220	-				+1.0
1,964,220	-				+1.9
1,964,243	+				+1.7
1,964,243	+				-0.9
1,964,243	+				-1.9
1,964,243	+				-0.9
1,964,244	-				+1.5
1,964,244	-				+1.2
1,964,405	+		PFLU_RS08860	0.21	+0.7
1,964,406	-		PFLU_RS08860	0.22	+0.3
1,964,758	+		PFLU_RS08860	0.61	+1.5
1,964,758	+		PFLU_RS08860	0.61	+1.0
1,964,758	+		PFLU_RS08860	0.61	+1.9
1,965,002	+		PFLU_RS08860	0.88	+0.1
1,965,099	-				-0.8
1,965,122	+				-1.9
1,965,122	+				-2.4
1,965,122	+				-1.1
1,965,123	-				+0.6
1,965,123	-				-2.5
1,965,123	-				-1.5
1,965,123	-				+1.5
1,965,123	-				+2.4
1,965,123	-				-1.1
1,965,123	-				+2.2
1,965,125	+				-0.6
1,965,125	+				+0.1
1,965,125	+				+0.1
1,965,125	+				-2.7
1,965,126	-				+1.8
1,965,126	-				-2.8
1,965,126	-				+0.1
1,965,126	-				+2.1
1,965,126	-				-1.5
1,965,126	-				-1.9
1,965,179	+				+2.0
1,965,187	+				+1.1
1,965,187	+				-0.2
1,965,187	+				+1.5
1,965,188	-				+0.9
1,965,188	-				+0.4
1,965,251	+				+1.8
1,965,251	+				-1.1
1,965,251	+				+0.1
1,965,251	+				+1.4
1,965,251	+				-0.3
1,965,252	-				+0.6
1,965,252	-				-1.7
1,965,252	-				-0.0
1,965,262	-				-1.7
1,965,311	+				+1.1
1,965,311	+				-1.7
1,965,312	-				+1.4
1,965,312	-				+0.5
1,965,312	-				+0.1
1,965,371	+		PFLU_RS08865	0.15	-1.3
1,965,371	+		PFLU_RS08865	0.15	+0.1
1,965,371	+		PFLU_RS08865	0.15	+2.1
1,965,372	-		PFLU_RS08865	0.16	+1.0
1,965,494	+		PFLU_RS08865	0.31	+1.7
1,965,494	+		PFLU_RS08865	0.31	+2.0
1,965,494	+		PFLU_RS08865	0.31	-2.2
1,965,494	+		PFLU_RS08865	0.31	-1.9
1,965,494	+		PFLU_RS08865	0.31	+1.9
1,965,494	+		PFLU_RS08865	0.31	+1.8
1,965,494	+		PFLU_RS08865	0.31	-0.3
1,965,494	+		PFLU_RS08865	0.31	+0.3
1,965,494	+		PFLU_RS08865	0.31	+0.4
1,965,494	+		PFLU_RS08865	0.31	+0.7
1,965,494	+		PFLU_RS08865	0.31	-1.1
1,965,494	+		PFLU_RS08865	0.31	+1.5
1,965,494	+		PFLU_RS08865	0.31	-0.1
1,965,494	+		PFLU_RS08865	0.31	+2.2
1,965,494	+		PFLU_RS08865	0.31	+0.2
1,965,494	+		PFLU_RS08865	0.31	-1.5
1,965,494	+		PFLU_RS08865	0.31	+0.2
1,965,494	+		PFLU_RS08865	0.31	+0.3
1,965,494	+		PFLU_RS08865	0.31	+1.7
1,965,494	+		PFLU_RS08865	0.31	+1.8
1,965,494	+		PFLU_RS08865	0.31	-0.3
1,965,494	+		PFLU_RS08865	0.31	+1.7
1,965,494	+		PFLU_RS08865	0.31	-2.0
1,965,494	+		PFLU_RS08865	0.31	+1.5
1,965,495	-		PFLU_RS08865	0.31	-1.3
1,965,495	-		PFLU_RS08865	0.31	+0.5
1,965,495	-		PFLU_RS08865	0.31	-0.8
1,965,495	-		PFLU_RS08865	0.31	-0.9
1,965,495	-		PFLU_RS08865	0.31	+0.7
1,965,495	-		PFLU_RS08865	0.31	+2.4
1,965,495	-		PFLU_RS08865	0.31	+1.1
1,965,495	-		PFLU_RS08865	0.31	-2.0
1,965,495	-		PFLU_RS08865	0.31	+2.1
1,965,495	-		PFLU_RS08865	0.31	+0.8
1,965,495	-		PFLU_RS08865	0.31	+1.1
1,965,503	+		PFLU_RS08865	0.32	+2.0
1,965,504	-		PFLU_RS08865	0.32	+1.3
1,965,504	-		PFLU_RS08865	0.32	+1.9
1,965,504	-		PFLU_RS08865	0.32	+1.0
1,965,572	+		PFLU_RS08865	0.41	-1.9
1,965,572	+		PFLU_RS08865	0.41	-0.7
1,965,573	-		PFLU_RS08865	0.41	+0.5
1,965,573	-		PFLU_RS08865	0.41	-0.7
1,965,573	-		PFLU_RS08865	0.41	-1.4
1,965,573	-		PFLU_RS08865	0.41	+0.2
1,965,573	-		PFLU_RS08865	0.41	+0.5
1,965,650	+		PFLU_RS08865	0.51	-0.7
1,965,650	+		PFLU_RS08865	0.51	-1.3
1,965,650	+		PFLU_RS08865	0.51	-0.8
1,965,650	+		PFLU_RS08865	0.51	+1.2
1,965,651	-		PFLU_RS08865	0.51	+1.7
1,965,651	-		PFLU_RS08865	0.51	-1.3
1,965,696	+		PFLU_RS08865	0.57	+1.7
1,965,696	+		PFLU_RS08865	0.57	-2.3
1,965,696	+		PFLU_RS08865	0.57	+1.7
1,965,696	+		PFLU_RS08865	0.57	-1.7
1,965,696	+		PFLU_RS08865	0.57	-1.7
1,965,696	+		PFLU_RS08865	0.57	+2.7
1,965,697	-		PFLU_RS08865	0.57	+1.7
1,965,697	-		PFLU_RS08865	0.57	+0.7
1,965,697	-		PFLU_RS08865	0.57	+1.7
1,965,697	-		PFLU_RS08865	0.57	+2.0
1,965,697	-		PFLU_RS08865	0.57	-2.3
1,965,697	-		PFLU_RS08865	0.57	+1.4
1,965,697	-		PFLU_RS08865	0.57	-1.9
1,965,697	-		PFLU_RS08865	0.57	-1.5
1,965,697	-		PFLU_RS08865	0.57	-0.2
1,965,697	-		PFLU_RS08865	0.57	-1.8
1,965,697	-		PFLU_RS08865	0.57	-1.9
1,965,697	-		PFLU_RS08865	0.57	+3.2
1,965,932	+		PFLU_RS08865	0.87	+0.3
1,965,932	+		PFLU_RS08865	0.87	-1.9
1,965,932	+		PFLU_RS08865	0.87	+2.5
1,965,933	-		PFLU_RS08865	0.87	-1.1
1,965,933	-		PFLU_RS08865	0.87	-2.2
1,965,933	-		PFLU_RS08865	0.87	-1.5
1,966,032	+				+0.0
1,966,032	+				-1.3
1,966,032	+				+0.7
1,966,033	-				-1.3
1,966,033	-				-0.8
1,966,033	-				+0.8
1,966,044	+				-2.2