Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS08260

Experiment: Choline chloride 10 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline chloride 10 mM (C)
1,846,823	+		PFLU_RS08250	0.59	+0.7
1,846,824	-		PFLU_RS08250	0.59	+0.1
1,846,824	-		PFLU_RS08250	0.59	-1.5
1,846,824	-		PFLU_RS08250	0.59	+1.9
1,846,927	+		PFLU_RS08250	0.69	-1.5
1,846,927	+		PFLU_RS08250	0.69	+0.4
1,846,927	+		PFLU_RS08250	0.69	-2.6
1,846,928	-		PFLU_RS08250	0.69	+1.1
1,846,928	-		PFLU_RS08250	0.69	+1.1
1,847,050	+		PFLU_RS08250	0.81	+0.5
1,847,050	+		PFLU_RS08250	0.81	+1.2
1,847,050	+		PFLU_RS08250	0.81	-0.2
1,847,050	+		PFLU_RS08250	0.81	+1.0
1,847,051	-		PFLU_RS08250	0.81	-1.5
1,847,101	+		PFLU_RS08250	0.86	-1.5
1,847,101	+		PFLU_RS08250	0.86	-0.6
1,847,101	+		PFLU_RS08250	0.86	+2.6
1,847,102	-		PFLU_RS08250	0.86	+0.7
1,847,102	-		PFLU_RS08250	0.86	-2.9
1,847,141	+		PFLU_RS08250	0.90	+2.6
1,847,155	+				+0.7
1,847,156	-				+2.5
1,847,240	+				-1.6
1,847,240	+				+1.1
1,847,240	+				-0.6
1,847,241	-				+1.3
1,847,241	-				+0.1
1,847,241	-				+1.4
1,847,241	-				+1.3
1,847,241	-				-1.5
1,847,354	+				+1.7
1,847,355	-				-0.4
1,847,364	+				-3.2
1,847,365	-				+2.7
1,847,375	+				-0.9
1,847,376	-				-2.1
1,847,386	+				-1.5
1,847,387	-				+2.0
1,847,387	-				+2.7
1,847,388	+				-0.7
1,847,388	+				+0.3
1,847,388	+				-1.5
1,847,388	+				+2.0
1,847,388	+				-0.2
1,847,388	+				+3.0
1,847,388	+				+1.7
1,847,388	+				+0.5
1,847,388	+				+0.7
1,847,388	+				-1.7
1,847,388	+				-2.0
1,847,388	+				-3.0
1,847,388	+				-0.9
1,847,388	+				-2.6
1,847,388	+				+1.0
1,847,389	-				+0.6
1,847,389	-				-2.0
1,847,389	-				-0.1
1,847,389	-				-0.4
1,847,389	-				-2.0
1,847,389	-				-2.4
1,847,389	-				+2.4
1,847,389	-				-2.3
1,847,389	-				+0.1
1,847,389	-				-0.3
1,847,389	-				-1.1
1,847,389	-				+1.3
1,847,389	-				+2.7
1,847,389	-				+2.4
1,847,389	-				+1.6
1,847,389	-				-2.5
1,847,389	-				-2.5
1,847,392	+				+0.3
1,847,392	+				-1.6
1,847,392	+				-1.1
1,847,392	+				-0.7
1,847,392	+				+0.7
1,847,392	+				-3.2
1,847,392	+				+0.9
1,847,392	+				-1.1
1,847,392	+				-0.9
1,847,392	+				-2.5
1,847,392	+				-2.6
1,847,392	+				+1.1
1,847,392	+				-2.2
1,847,392	+				-1.3
1,847,392	+				+0.3
1,847,392	+				-2.3
1,847,392	+				-1.1
1,847,392	+				-0.9
1,847,392	+				+1.3
1,847,392	+				+1.4
1,847,392	+				+1.1
1,847,392	+				+1.5
1,847,393	-				-0.6
1,847,393	-				+2.0
1,847,393	-				-0.2
1,847,393	-				-1.9
1,847,393	-				-2.2
1,847,393	-				+0.7
1,847,393	-				-2.5
1,847,393	-				+0.2
1,847,393	-				+0.1
1,847,393	-				+0.5
1,847,393	-				-2.5
1,847,393	-				-0.2
1,847,393	-				-0.9
1,847,393	-				-0.8
1,847,393	-				-0.6
1,847,393	-				+1.5
1,847,393	-				-0.1
1,847,393	-				-0.3
1,847,393	-				-1.5
1,847,393	-				-0.3
1,847,393	-				+0.3
1,847,393	-				+0.8
1,847,393	-				-1.9
1,847,393	-				-0.6
1,847,393	-				+1.4
1,847,393	-				-1.7
1,847,393	-				+1.7
1,847,396	-				-1.1
1,847,431	+				-0.9
1,847,431	+				+2.2
1,847,431	+				+2.5
1,847,431	+				+1.5
1,847,431	+				-2.9
1,847,432	-				+0.6
1,847,432	-				-1.6
1,847,432	-				+2.1
1,847,432	-				+0.6
1,847,432	-				+0.8
1,847,432	-				+0.1
1,847,432	-				+1.0
1,847,432	-				-1.1
1,847,432	-				-1.3
1,847,432	-				-0.9
1,847,432	-				+0.6
1,847,432	-				-0.3
1,847,432	-				+1.1
1,847,432	-				+1.7
1,847,442	+				+1.7
1,847,442	+				-0.3
1,847,443	-				+0.4
1,847,443	-				+0.2
1,847,443	-				+0.9
1,847,443	-				+0.7
1,847,443	-				-2.2
1,847,449	+				-2.2
1,847,449	+				-3.5
1,847,449	+				+2.0
1,847,449	+				+1.0
1,847,449	+				-2.0
1,847,450	-				+1.8
1,847,450	-				-3.3
1,847,450	-				+1.4
1,847,450	-				+1.0
1,847,450	-				+1.3
1,847,466	+				+0.3
1,847,637	+		PFLU_RS08255	0.55	+0.7
1,847,733	+		PFLU_RS08255	0.89	+1.4
1,847,733	+		PFLU_RS08255	0.89	-1.9
1,847,733	+		PFLU_RS08255	0.89	+1.6
1,847,733	+		PFLU_RS08255	0.89	-1.1
1,847,733	+		PFLU_RS08255	0.89	-1.6
1,847,733	+		PFLU_RS08255	0.89	-1.1
1,847,734	-		PFLU_RS08255	0.90	-2.1
1,847,734	-		PFLU_RS08255	0.90	-1.1
1,847,734	-		PFLU_RS08255	0.90	+1.1
1,847,734	-		PFLU_RS08255	0.90	+1.7
1,847,734	-		PFLU_RS08255	0.90	-0.3
1,847,734	-		PFLU_RS08255	0.90	+1.5
1,847,734	-		PFLU_RS08255	0.90	+0.9
1,847,734	-		PFLU_RS08255	0.90	-1.7
1,847,734	-		PFLU_RS08255	0.90	+0.5
1,847,735	+				+0.6
1,847,774	+				+0.2
1,847,775	-				+2.0
1,847,775	-				-3.0
1,847,792	-				+3.6
1,847,792	-				-1.1
1,847,826	+				-0.2
1,847,826	+				+2.3
1,847,826	+				-0.9
1,847,827	-				-1.0
1,847,827	-				-1.3
1,847,827	-				-0.6
1,847,827	-				-1.5
1,847,827	-				-2.3
1,847,827	-				-1.9
1,847,853	+				-1.6
1,847,853	+				-0.3
1,847,853	+				+0.4
1,847,853	+				-0.3
1,847,853	+				+0.6
1,847,853	+				-1.1
1,847,853	+				-1.6
1,847,854	-				+0.9
1,847,854	-				-1.9
1,847,854	-				+1.2
1,847,854	-				-0.9
1,847,854	-				+0.1
1,847,854	-				+2.9
1,847,860	-				-2.7
1,848,001	+		PFLU_RS08260	0.26	+0.1
1,848,002	-		PFLU_RS08260	0.26	-0.9
1,848,053	+		PFLU_RS08260	0.33	+1.3
1,848,053	+		PFLU_RS08260	0.33	+1.1
1,848,054	-		PFLU_RS08260	0.33	+0.7
1,848,054	-		PFLU_RS08260	0.33	+1.5
1,848,054	-		PFLU_RS08260	0.33	-1.3
1,848,057	+		PFLU_RS08260	0.33	+0.7
1,848,057	+		PFLU_RS08260	0.33	+1.3
1,848,058	-		PFLU_RS08260	0.33	+2.1
1,848,058	-		PFLU_RS08260	0.33	+1.3
1,848,578	+				+2.8
1,848,578	+				-2.0
1,848,579	-				+2.1
1,848,579	-				-0.4
1,848,590	-				+0.1
1,848,598	+				+1.2
1,848,618	+				-1.4
1,848,618	+				-1.7
1,848,619	-				-2.5
1,848,619	-				+0.0
1,848,664	+				+1.7
1,848,664	+				-2.3
1,848,664	+				+1.3
1,848,771	-		PFLU_RS08265	0.14	+0.7
1,848,771	-		PFLU_RS08265	0.14	-2.2
1,848,771	-		PFLU_RS08265	0.14	+0.9
1,848,844	-		PFLU_RS08265	0.24	-1.6
1,848,866	+		PFLU_RS08265	0.26	+1.5
1,848,866	+		PFLU_RS08265	0.26	+1.3
1,848,866	+		PFLU_RS08265	0.26	-1.1
1,848,866	+		PFLU_RS08265	0.26	+1.1
1,848,867	-		PFLU_RS08265	0.26	-0.2
1,848,867	-		PFLU_RS08265	0.26	-1.3
1,848,951	+		PFLU_RS08265	0.37	-0.0
1,848,951	+		PFLU_RS08265	0.37	+1.7
1,848,951	+		PFLU_RS08265	0.37	-0.8
1,848,951	+		PFLU_RS08265	0.37	-2.2
1,848,951	+		PFLU_RS08265	0.37	-1.3
1,848,951	+		PFLU_RS08265	0.37	+0.8
1,848,951	+		PFLU_RS08265	0.37	-0.4
1,848,951	+		PFLU_RS08265	0.37	-2.9
1,848,951	+		PFLU_RS08265	0.37	+2.4
1,848,951	+		PFLU_RS08265	0.37	+0.9
1,848,951	+		PFLU_RS08265	0.37	-1.6
1,848,951	+		PFLU_RS08265	0.37	-2.2
1,848,951	+		PFLU_RS08265	0.37	+2.4
1,848,952	-		PFLU_RS08265	0.37	-2.4
1,848,952	-		PFLU_RS08265	0.37	+1.4
1,848,952	-		PFLU_RS08265	0.37	+1.5
1,848,952	-		PFLU_RS08265	0.37	+2.0
1,848,952	-		PFLU_RS08265	0.37	+0.8
1,848,952	-		PFLU_RS08265	0.37	+0.4
1,848,952	-		PFLU_RS08265	0.37	-0.3
1,848,952	-		PFLU_RS08265	0.37	+0.3
1,848,952	-		PFLU_RS08265	0.37	+0.7
1,848,952	-		PFLU_RS08265	0.37	+2.0
1,849,049	+		PFLU_RS08265	0.49	+1.0
1,849,049	+		PFLU_RS08265	0.49	+0.4
1,849,049	+		PFLU_RS08265	0.49	-1.5
1,849,049	+		PFLU_RS08265	0.49	-1.5
1,849,049	+		PFLU_RS08265	0.49	+1.9
1,849,049	+		PFLU_RS08265	0.49	+0.6
1,849,050	-		PFLU_RS08265	0.49	+2.5
1,849,050	-		PFLU_RS08265	0.49	+2.0
1,849,050	-		PFLU_RS08265	0.49	-2.5
1,849,050	-		PFLU_RS08265	0.49	-0.3
1,849,050	-		PFLU_RS08265	0.49	+1.2
1,849,050	-		PFLU_RS08265	0.49	-2.8
1,849,050	-		PFLU_RS08265	0.49	+0.1
1,849,050	-		PFLU_RS08265	0.49	-0.6
1,849,051	+		PFLU_RS08265	0.49	+1.0
1,849,051	+		PFLU_RS08265	0.49	-0.8
1,849,051	+		PFLU_RS08265	0.49	-0.6
1,849,051	+		PFLU_RS08265	0.49	-1.3
1,849,052	-		PFLU_RS08265	0.50	-1.1
1,849,052	-		PFLU_RS08265	0.50	-2.5
1,849,201	+		PFLU_RS08265	0.68	+0.4
1,849,201	+		PFLU_RS08265	0.68	+0.3
1,849,201	+		PFLU_RS08265	0.68	-2.5
1,849,201	+		PFLU_RS08265	0.68	-2.3
1,849,201	+		PFLU_RS08265	0.68	-2.1
1,849,201	+		PFLU_RS08265	0.68	-0.3
1,849,201	+		PFLU_RS08265	0.68	-0.5
1,849,201	+		PFLU_RS08265	0.68	-2.7
1,849,201	+		PFLU_RS08265	0.68	+1.2
1,849,201	+		PFLU_RS08265	0.68	-1.9
1,849,201	+		PFLU_RS08265	0.68	-1.1
1,849,201	+		PFLU_RS08265	0.68	-0.9
1,849,201	+		PFLU_RS08265	0.68	+1.1
1,849,201	+		PFLU_RS08265	0.68	+0.4
1,849,201	+		PFLU_RS08265	0.68	+1.2
1,849,201	+		PFLU_RS08265	0.68	+1.1
1,849,201	+		PFLU_RS08265	0.68	+0.3
1,849,201	+		PFLU_RS08265	0.68	-1.5
1,849,201	+		PFLU_RS08265	0.68	+1.0
1,849,201	+		PFLU_RS08265	0.68	-2.3
1,849,201	+		PFLU_RS08265	0.68	-1.6
1,849,201	+		PFLU_RS08265	0.68	-2.3
1,849,201	+		PFLU_RS08265	0.68	-2.1
1,849,201	+		PFLU_RS08265	0.68	+0.7
1,849,201	+		PFLU_RS08265	0.68	+2.0
1,849,201	+		PFLU_RS08265	0.68	-1.5
1,849,201	+		PFLU_RS08265	0.68	-0.1
1,849,201	+		PFLU_RS08265	0.68	-0.3
1,849,201	+		PFLU_RS08265	0.68	+1.0
1,849,201	+		PFLU_RS08265	0.68	-2.3
1,849,201	+		PFLU_RS08265	0.68	-2.9
1,849,201	+		PFLU_RS08265	0.68	-1.6
1,849,201	+		PFLU_RS08265	0.68	-1.1
1,849,201	+		PFLU_RS08265	0.68	-2.1
1,849,202	-		PFLU_RS08265	0.68	+0.7
1,849,202	-		PFLU_RS08265	0.68	-0.1
1,849,202	-		PFLU_RS08265	0.68	-1.3
1,849,202	-		PFLU_RS08265	0.68	-1.7
1,849,202	-		PFLU_RS08265	0.68	-1.4
1,849,202	-		PFLU_RS08265	0.68	-1.8
1,849,202	-		PFLU_RS08265	0.68	-0.6
1,849,202	-		PFLU_RS08265	0.68	-1.5
1,849,202	-		PFLU_RS08265	0.68	-0.5
1,849,202	-		PFLU_RS08265	0.68	+0.5
1,849,202	-		PFLU_RS08265	0.68	-2.4
1,849,202	-		PFLU_RS08265	0.68	-0.9
1,849,202	-		PFLU_RS08265	0.68	-1.5
1,849,202	-		PFLU_RS08265	0.68	-1.8
1,849,202	-		PFLU_RS08265	0.68	+0.9
1,849,202	-		PFLU_RS08265	0.68	-0.4
1,849,202	-		PFLU_RS08265	0.68	+0.1
1,849,202	-		PFLU_RS08265	0.68	+1.5
1,849,202	-		PFLU_RS08265	0.68	+1.5
1,849,202	-		PFLU_RS08265	0.68	-2.1
1,849,202	-		PFLU_RS08265	0.68	-0.9
1,849,202	-		PFLU_RS08265	0.68	+2.4
1,849,202	-		PFLU_RS08265	0.68	-0.0
1,849,202	-		PFLU_RS08265	0.68	-0.6
1,849,202	-		PFLU_RS08265	0.68	-2.5
1,849,202	-		PFLU_RS08265	0.68	+0.7
1,849,202	-		PFLU_RS08265	0.68	-0.2
1,849,202	-		PFLU_RS08265	0.68	+1.0
1,849,202	-		PFLU_RS08265	0.68	-0.6
1,849,202	-		PFLU_RS08265	0.68	+0.7
1,849,202	-		PFLU_RS08265	0.68	-0.6
1,849,202	-		PFLU_RS08265	0.68	+1.4
1,849,202	-		PFLU_RS08265	0.68	-2.4
1,849,202	-		PFLU_RS08265	0.68	-1.8
1,849,202	-		PFLU_RS08265	0.68	-1.3
1,849,202	-		PFLU_RS08265	0.68	+0.7
1,849,202	-		PFLU_RS08265	0.68	+0.3
1,849,202	-		PFLU_RS08265	0.68	+0.0
1,849,203	+		PFLU_RS08265	0.69	-0.9
1,849,203	+		PFLU_RS08265	0.69	+1.3
1,849,203	+		PFLU_RS08265	0.69	+0.4
1,849,203	+		PFLU_RS08265	0.69	-1.5
1,849,203	+		PFLU_RS08265	0.69	+0.1
1,849,203	+		PFLU_RS08265	0.69	+2.4
1,849,203	+		PFLU_RS08265	0.69	-2.5
1,849,203	+		PFLU_RS08265	0.69	+1.0
1,849,203	+		PFLU_RS08265	0.69	-1.3
1,849,203	+		PFLU_RS08265	0.69	+0.6
1,849,203	+		PFLU_RS08265	0.69	+1.0
1,849,203	+		PFLU_RS08265	0.69	-0.2
1,849,204	-		PFLU_RS08265	0.69	+1.1
1,849,204	-		PFLU_RS08265	0.69	+1.9
1,849,204	-		PFLU_RS08265	0.69	-2.1
1,849,204	-		PFLU_RS08265	0.69	+0.2
1,849,204	-		PFLU_RS08265	0.69	-3.4
1,849,204	-		PFLU_RS08265	0.69	+1.2
1,849,204	-		PFLU_RS08265	0.69	+0.7
1,849,204	-		PFLU_RS08265	0.69	-0.8
1,849,204	-		PFLU_RS08265	0.69	-0.9
1,849,204	-		PFLU_RS08265	0.69	-1.3
1,849,204	-		PFLU_RS08265	0.69	-1.5
1,849,204	-		PFLU_RS08265	0.69	+1.6
1,849,204	-		PFLU_RS08265	0.69	+1.2
1,849,204	-		PFLU_RS08265	0.69	-3.2
1,849,204	-		PFLU_RS08265	0.69	-2.3
1,849,204	-		PFLU_RS08265	0.69	+0.6
1,849,213	-		PFLU_RS08265	0.70	+1.9
1,849,337	+		PFLU_RS08265	0.85	-0.3
1,849,337	+		PFLU_RS08265	0.85	+1.1
1,849,337	+		PFLU_RS08265	0.85	-2.9
1,849,337	+		PFLU_RS08265	0.85	-1.8
1,849,338	-		PFLU_RS08265	0.85	+0.8
1,849,340	+		PFLU_RS08265	0.86	+0.8
1,849,340	+		PFLU_RS08265	0.86	+2.6
1,849,340	+		PFLU_RS08265	0.86	-1.0
1,849,340	+		PFLU_RS08265	0.86	+0.1
1,849,340	+		PFLU_RS08265	0.86	+1.7
1,849,340	+		PFLU_RS08265	0.86	+0.6
1,849,340	+		PFLU_RS08265	0.86	+0.2
1,849,340	+		PFLU_RS08265	0.86	+1.0
1,849,340	+		PFLU_RS08265	0.86	+0.3
1,849,340	+		PFLU_RS08265	0.86	-0.3
1,849,340	+		PFLU_RS08265	0.86	+0.6
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1,849,341	-		PFLU_RS08265	0.86	+1.0
1,849,341	-		PFLU_RS08265	0.86	-0.7
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1,849,341	-		PFLU_RS08265	0.86	+0.8
1,849,341	-		PFLU_RS08265	0.86	-0.6
1,849,341	-		PFLU_RS08265	0.86	+0.6
1,849,341	-		PFLU_RS08265	0.86	+0.2
1,849,341	-		PFLU_RS08265	0.86	+1.2
1,849,341	-		PFLU_RS08265	0.86	+1.5
1,849,341	-		PFLU_RS08265	0.86	+2.9
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1,849,341	-		PFLU_RS08265	0.86	+1.7
1,849,341	-		PFLU_RS08265	0.86	+0.8
1,849,341	-		PFLU_RS08265	0.86	+0.2
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1,849,341	-		PFLU_RS08265	0.86	-2.0
1,849,341	-		PFLU_RS08265	0.86	-0.1
1,849,393	-				-2.8
1,849,549	+		PFLU_RS08270	0.26	-1.6
1,849,549	+		PFLU_RS08270	0.26	+0.5
1,849,550	-		PFLU_RS08270	0.26	+0.3
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1,849,560	+		PFLU_RS08270	0.29	+1.5
1,849,561	-		PFLU_RS08270	0.29	+1.2