Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS06155

Experiment: caffeic 2 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	caffeic 2 mM (C)
1,375,766	+		PFLU_RS06145	0.77	-0.5
1,375,766	+		PFLU_RS06145	0.77	-0.5
1,375,766	+		PFLU_RS06145	0.77	+0.3
1,375,766	+		PFLU_RS06145	0.77	-0.7
1,375,767	-		PFLU_RS06145	0.78	-0.5
1,375,767	-		PFLU_RS06145	0.78	-2.2
1,375,843	+				+2.8
1,375,843	+				+0.8
1,375,843	+				-0.0
1,375,844	-				-0.7
1,375,846	+				-1.9
1,375,846	+				+3.0
1,375,846	+				-2.3
1,375,846	+				-2.3
1,375,846	+				+2.7
1,375,846	+				+1.9
1,375,846	+				+1.1
1,375,846	+				+2.5
1,375,847	-				-1.1
1,375,847	-				+1.8
1,375,847	-				+1.1
1,375,847	-				-2.0
1,375,847	-				+1.1
1,375,847	-				+1.1
1,375,847	-				+3.1
1,375,847	-				-0.1
1,375,847	-				-0.0
1,375,847	-				-0.5
1,375,847	-				+2.2
1,375,888	+				+1.6
1,375,888	+				-2.4
1,375,889	-				+0.2
1,375,894	+				-0.7
1,375,921	+		PFLU_RS06150	0.10	+0.2
1,375,921	+		PFLU_RS06150	0.10	-1.9
1,375,922	-		PFLU_RS06150	0.11	+2.5
1,375,933	+		PFLU_RS06150	0.12	+2.3
1,375,934	-		PFLU_RS06150	0.12	+1.8
1,375,934	-		PFLU_RS06150	0.12	+2.0
1,375,934	-		PFLU_RS06150	0.12	+0.3
1,375,934	-		PFLU_RS06150	0.12	+2.5
1,375,975	+		PFLU_RS06150	0.17	+2.6
1,375,975	+		PFLU_RS06150	0.17	+2.1
1,375,975	+		PFLU_RS06150	0.17	-2.6
1,375,975	+		PFLU_RS06150	0.17	-2.6
1,375,976	-		PFLU_RS06150	0.17	-1.2
1,375,976	-		PFLU_RS06150	0.17	+0.9
1,375,976	-		PFLU_RS06150	0.17	-1.5
1,375,976	-		PFLU_RS06150	0.17	-2.3
1,375,976	-		PFLU_RS06150	0.17	+0.1
1,376,240	+		PFLU_RS06150	0.48	-1.1
1,376,240	+		PFLU_RS06150	0.48	+2.0
1,376,240	+		PFLU_RS06150	0.48	-0.7
1,376,241	-		PFLU_RS06150	0.48	-2.4
1,376,246	+		PFLU_RS06150	0.48	+0.9
1,376,246	+		PFLU_RS06150	0.48	+1.9
1,376,246	+		PFLU_RS06150	0.48	+1.1
1,376,246	+		PFLU_RS06150	0.48	+0.1
1,376,247	-		PFLU_RS06150	0.48	+1.1
1,376,247	-		PFLU_RS06150	0.48	-2.2
1,376,247	-		PFLU_RS06150	0.48	+1.1
1,376,247	-		PFLU_RS06150	0.48	-0.5
1,376,247	-		PFLU_RS06150	0.48	-1.5
1,376,247	-		PFLU_RS06150	0.48	-0.5
1,376,247	-		PFLU_RS06150	0.48	-2.0
1,376,454	+		PFLU_RS06150	0.72	-0.9
1,376,455	-		PFLU_RS06150	0.72	+0.2
1,376,455	-		PFLU_RS06150	0.72	+2.7
1,376,545	+		PFLU_RS06150	0.83	+0.9
1,376,545	+		PFLU_RS06150	0.83	-0.1
1,376,545	+		PFLU_RS06150	0.83	-2.3
1,376,545	+		PFLU_RS06150	0.83	-0.9
1,376,545	+		PFLU_RS06150	0.83	-2.1
1,376,545	+		PFLU_RS06150	0.83	+0.5
1,376,545	+		PFLU_RS06150	0.83	-0.9
1,376,545	+		PFLU_RS06150	0.83	+1.4
1,376,545	+		PFLU_RS06150	0.83	+2.1
1,376,545	+		PFLU_RS06150	0.83	-0.3
1,376,545	+		PFLU_RS06150	0.83	-3.0
1,376,545	+		PFLU_RS06150	0.83	+1.3
1,376,545	+		PFLU_RS06150	0.83	-1.6
1,376,545	+		PFLU_RS06150	0.83	+1.3
1,376,545	+		PFLU_RS06150	0.83	+2.0
1,376,545	+		PFLU_RS06150	0.83	-2.0
1,376,545	+		PFLU_RS06150	0.83	-0.4
1,376,545	+		PFLU_RS06150	0.83	+0.5
1,376,545	+		PFLU_RS06150	0.83	-0.2
1,376,546	-		PFLU_RS06150	0.83	-0.9
1,376,546	-		PFLU_RS06150	0.83	+2.2
1,376,546	-		PFLU_RS06150	0.83	+1.6
1,376,546	-		PFLU_RS06150	0.83	+0.6
1,376,546	-		PFLU_RS06150	0.83	-2.8
1,376,546	-		PFLU_RS06150	0.83	+2.1
1,376,546	-		PFLU_RS06150	0.83	+0.5
1,376,546	-		PFLU_RS06150	0.83	+0.9
1,376,546	-		PFLU_RS06150	0.83	+0.8
1,376,546	-		PFLU_RS06150	0.83	+0.1
1,376,546	-		PFLU_RS06150	0.83	-0.9
1,376,546	-		PFLU_RS06150	0.83	-1.2
1,376,546	-		PFLU_RS06150	0.83	-0.2
1,376,624	+				+1.0
1,376,625	-				-0.2
1,376,685	-				+2.1
1,376,685	-				+1.5
1,376,689	+				-0.2
1,376,689	+				-0.9
1,376,690	-				+0.2
1,376,690	-				+2.1
1,376,690	-				+1.1
1,376,690	-				-1.4
1,376,690	-				+0.3
1,376,783	+				+0.5
1,376,867	-		PFLU_RS06155	0.18	+0.1
1,377,097	+		PFLU_RS06155	0.46	-0.2
1,377,098	-		PFLU_RS06155	0.46	-1.8
1,377,098	-		PFLU_RS06155	0.46	-0.4
1,377,098	-		PFLU_RS06155	0.46	-1.6
1,377,116	+		PFLU_RS06155	0.48	+1.0
1,377,116	+		PFLU_RS06155	0.48	-1.5
1,377,116	+		PFLU_RS06155	0.48	-2.0
1,377,117	-		PFLU_RS06155	0.48	+2.8
1,377,245	-		PFLU_RS06155	0.64	+3.7
1,377,245	-		PFLU_RS06155	0.64	+3.5
1,377,245	-		PFLU_RS06155	0.64	-0.2
1,377,271	+		PFLU_RS06155	0.67	-2.2
1,377,272	-		PFLU_RS06155	0.67	+0.2
1,377,272	-		PFLU_RS06155	0.67	+2.8
1,377,272	-		PFLU_RS06155	0.67	+2.3
1,377,272	-		PFLU_RS06155	0.67	-1.5
1,377,272	-		PFLU_RS06155	0.67	+0.2
1,377,272	-		PFLU_RS06155	0.67	+3.9
1,377,272	-		PFLU_RS06155	0.67	-1.4
1,377,272	-		PFLU_RS06155	0.67	+2.2
1,377,439	+		PFLU_RS06155	0.87	-0.1
1,377,451	+		PFLU_RS06155	0.88	-3.2
1,377,451	+		PFLU_RS06155	0.88	-2.4
1,377,451	+		PFLU_RS06155	0.88	+1.8
1,377,451	+		PFLU_RS06155	0.88	-1.0
1,377,451	+		PFLU_RS06155	0.88	+0.1
1,377,451	+		PFLU_RS06155	0.88	-2.4
1,377,451	+		PFLU_RS06155	0.88	+1.4
1,377,452	-		PFLU_RS06155	0.89	+2.7
1,377,452	-		PFLU_RS06155	0.89	+0.8
1,377,452	-		PFLU_RS06155	0.89	+0.3
1,377,452	-		PFLU_RS06155	0.89	+0.6
1,377,452	-		PFLU_RS06155	0.89	-2.2
1,377,452	-		PFLU_RS06155	0.89	+2.9
1,377,452	-		PFLU_RS06155	0.89	+2.2
1,377,452	-		PFLU_RS06155	0.89	+3.2
1,377,452	-		PFLU_RS06155	0.89	-2.1
1,377,472	+				+0.8
1,377,472	+				-0.9
1,377,472	+				+0.3
1,377,472	+				-1.7
1,377,472	+				-0.9
1,377,472	+				-0.2
1,377,472	+				+0.9
1,377,472	+				-0.2
1,377,472	+				+0.8
1,377,472	+				-0.9
1,377,473	-				+2.8
1,377,473	-				+2.5
1,377,473	-				-2.1
1,377,473	-				+1.2
1,377,473	-				-1.2
1,377,473	-				+2.3
1,377,473	-				+1.1
1,377,473	-				-1.8
1,377,473	-				+0.5
1,377,544	+				-0.6
1,377,544	+				+2.2
1,377,544	+				-1.2
1,377,544	+				+0.5
1,377,545	-				+0.5
1,377,545	-				-1.6
1,377,545	-				+0.3
1,377,545	-				-2.5
1,377,668	+		PFLU_RS06160	0.17	-0.7
1,377,668	+		PFLU_RS06160	0.17	-0.9
1,377,668	+		PFLU_RS06160	0.17	+1.5
1,377,668	+		PFLU_RS06160	0.17	+2.5
1,377,668	+		PFLU_RS06160	0.17	-2.0
1,377,668	+		PFLU_RS06160	0.17	-0.1
1,377,668	+		PFLU_RS06160	0.17	-1.5
1,377,668	+		PFLU_RS06160	0.17	+0.4
1,377,668	+		PFLU_RS06160	0.17	-0.2
1,377,668	+		PFLU_RS06160	0.17	+3.2
1,377,668	+		PFLU_RS06160	0.17	+3.1
1,377,669	-		PFLU_RS06160	0.17	+0.2
1,377,669	-		PFLU_RS06160	0.17	+0.5
1,377,669	-		PFLU_RS06160	0.17	-1.8
1,377,669	-		PFLU_RS06160	0.17	+0.5
1,377,669	-		PFLU_RS06160	0.17	+1.1
1,377,669	-		PFLU_RS06160	0.17	+0.7
1,377,697	+		PFLU_RS06160	0.21	+1.9
1,377,698	-		PFLU_RS06160	0.21	-1.6
1,377,813	+		PFLU_RS06160	0.38	-0.2
1,377,813	+		PFLU_RS06160	0.38	-2.2
1,377,813	+		PFLU_RS06160	0.38	+0.8
1,377,814	-		PFLU_RS06160	0.38	+0.5
1,377,814	-		PFLU_RS06160	0.38	+2.7
1,377,814	-		PFLU_RS06160	0.38	+1.1
1,377,814	-		PFLU_RS06160	0.38	+1.8
1,377,814	-		PFLU_RS06160	0.38	+0.1
1,377,814	-		PFLU_RS06160	0.38	-1.0
1,377,814	-		PFLU_RS06160	0.38	-3.0
1,377,816	+		PFLU_RS06160	0.38	+0.1
1,377,816	+		PFLU_RS06160	0.38	-1.7
1,377,816	+		PFLU_RS06160	0.38	+0.6
1,377,816	+		PFLU_RS06160	0.38	-1.2
1,377,816	+		PFLU_RS06160	0.38	+1.6
1,377,816	+		PFLU_RS06160	0.38	+1.6
1,377,817	-		PFLU_RS06160	0.38	-2.2
1,377,817	-		PFLU_RS06160	0.38	-0.2
1,377,817	-		PFLU_RS06160	0.38	+1.1
1,377,817	-		PFLU_RS06160	0.38	+2.0
1,377,817	-		PFLU_RS06160	0.38	-1.6
1,377,817	-		PFLU_RS06160	0.38	-0.1
1,377,817	-		PFLU_RS06160	0.38	+0.9
1,377,817	-		PFLU_RS06160	0.38	-1.0
1,377,817	-		PFLU_RS06160	0.38	+0.2
1,377,817	-		PFLU_RS06160	0.38	-2.4
1,377,990	+		PFLU_RS06160	0.63	-1.4
1,377,990	+		PFLU_RS06160	0.63	+1.1
1,377,990	+		PFLU_RS06160	0.63	-0.9
1,377,990	+		PFLU_RS06160	0.63	-1.1
1,377,990	+		PFLU_RS06160	0.63	-0.6
1,377,990	+		PFLU_RS06160	0.63	+0.8
1,377,990	+		PFLU_RS06160	0.63	-1.3
1,377,990	+		PFLU_RS06160	0.63	+1.2
1,377,990	+		PFLU_RS06160	0.63	+3.1
1,377,990	+		PFLU_RS06160	0.63	-1.4
1,377,990	+		PFLU_RS06160	0.63	+2.8
1,377,990	+		PFLU_RS06160	0.63	-0.7
1,377,990	+		PFLU_RS06160	0.63	-1.5
1,377,990	+		PFLU_RS06160	0.63	-0.5
1,377,990	+		PFLU_RS06160	0.63	-0.7
1,377,990	+		PFLU_RS06160	0.63	+0.4
1,377,990	+		PFLU_RS06160	0.63	-1.1
1,377,990	+		PFLU_RS06160	0.63	-0.6
1,377,991	-		PFLU_RS06160	0.63	-2.0
1,377,991	-		PFLU_RS06160	0.63	-1.1
1,377,991	-		PFLU_RS06160	0.63	+2.1
1,377,991	-		PFLU_RS06160	0.63	+1.4
1,377,991	-		PFLU_RS06160	0.63	-1.8
1,377,991	-		PFLU_RS06160	0.63	-1.8
1,377,991	-		PFLU_RS06160	0.63	+1.3
1,377,991	-		PFLU_RS06160	0.63	-0.2
1,377,991	-		PFLU_RS06160	0.63	+4.4
1,377,991	-		PFLU_RS06160	0.63	+2.1
1,377,991	-		PFLU_RS06160	0.63	+0.1
1,377,991	-		PFLU_RS06160	0.63	-0.9
1,377,991	-		PFLU_RS06160	0.63	-1.6
1,377,991	-		PFLU_RS06160	0.63	-0.9
1,377,991	-		PFLU_RS06160	0.63	-0.4
1,377,991	-		PFLU_RS06160	0.63	-0.0
1,377,994	+		PFLU_RS06160	0.64	+0.3
1,377,994	+		PFLU_RS06160	0.64	-1.4
1,377,994	+		PFLU_RS06160	0.64	-1.1
1,377,994	+		PFLU_RS06160	0.64	-1.1
1,377,994	+		PFLU_RS06160	0.64	-0.2
1,377,994	+		PFLU_RS06160	0.64	+0.1
1,377,994	+		PFLU_RS06160	0.64	+0.1
1,377,994	+		PFLU_RS06160	0.64	+1.8
1,377,994	+		PFLU_RS06160	0.64	+1.1
1,377,994	+		PFLU_RS06160	0.64	-1.4
1,377,994	+		PFLU_RS06160	0.64	-0.4
1,377,994	+		PFLU_RS06160	0.64	-0.2
1,377,994	+		PFLU_RS06160	0.64	+1.4
1,377,994	+		PFLU_RS06160	0.64	-0.9
1,377,994	+		PFLU_RS06160	0.64	-0.4
1,377,994	+		PFLU_RS06160	0.64	-0.9
1,377,994	+		PFLU_RS06160	0.64	+0.8
1,377,994	+		PFLU_RS06160	0.64	+1.7
1,377,994	+		PFLU_RS06160	0.64	+0.6
1,377,994	+		PFLU_RS06160	0.64	-1.9
1,377,994	+		PFLU_RS06160	0.64	-0.3
1,377,994	+		PFLU_RS06160	0.64	-0.5
1,377,994	+		PFLU_RS06160	0.64	+0.5
1,377,994	+		PFLU_RS06160	0.64	+1.8
1,377,994	+		PFLU_RS06160	0.64	+1.9
1,377,994	+		PFLU_RS06160	0.64	-0.2
1,377,994	+		PFLU_RS06160	0.64	+2.6
1,377,994	+		PFLU_RS06160	0.64	-1.9
1,377,994	+		PFLU_RS06160	0.64	+1.5
1,377,994	+		PFLU_RS06160	0.64	-1.8
1,377,994	+		PFLU_RS06160	0.64	+0.7
1,377,994	+		PFLU_RS06160	0.64	+1.5
1,377,994	+		PFLU_RS06160	0.64	+1.7
1,377,994	+		PFLU_RS06160	0.64	+1.0
1,377,994	+		PFLU_RS06160	0.64	-0.9
1,377,994	+		PFLU_RS06160	0.64	-2.4
1,377,994	+		PFLU_RS06160	0.64	+0.2
1,377,994	+		PFLU_RS06160	0.64	-0.7
1,377,994	+		PFLU_RS06160	0.64	-3.3
1,377,994	+		PFLU_RS06160	0.64	+2.2
1,377,994	+		PFLU_RS06160	0.64	-1.1
1,377,994	+		PFLU_RS06160	0.64	+0.2
1,377,994	+		PFLU_RS06160	0.64	+0.9
1,377,994	+		PFLU_RS06160	0.64	+0.5
1,377,994	+		PFLU_RS06160	0.64	+0.1
1,377,994	+		PFLU_RS06160	0.64	-1.7
1,377,994	+		PFLU_RS06160	0.64	-1.6
1,377,995	-		PFLU_RS06160	0.64	-1.2
1,377,995	-		PFLU_RS06160	0.64	+0.5
1,377,995	-		PFLU_RS06160	0.64	+1.3
1,377,995	-		PFLU_RS06160	0.64	+1.6
1,377,995	-		PFLU_RS06160	0.64	-1.4
1,377,995	-		PFLU_RS06160	0.64	+2.3
1,377,995	-		PFLU_RS06160	0.64	+0.5
1,377,995	-		PFLU_RS06160	0.64	+1.3
1,377,995	-		PFLU_RS06160	0.64	+1.2
1,377,995	-		PFLU_RS06160	0.64	-2.2
1,377,995	-		PFLU_RS06160	0.64	+1.2
1,377,995	-		PFLU_RS06160	0.64	+0.0
1,377,995	-		PFLU_RS06160	0.64	+0.0
1,377,995	-		PFLU_RS06160	0.64	+0.4
1,377,995	-		PFLU_RS06160	0.64	-2.7
1,377,995	-		PFLU_RS06160	0.64	+2.6
1,377,995	-		PFLU_RS06160	0.64	+2.3
1,377,995	-		PFLU_RS06160	0.64	+1.8
1,377,995	-		PFLU_RS06160	0.64	-0.7
1,377,995	-		PFLU_RS06160	0.64	-1.1
1,377,995	-		PFLU_RS06160	0.64	+0.6
1,377,995	-		PFLU_RS06160	0.64	-1.8
1,377,995	-		PFLU_RS06160	0.64	-0.2
1,377,995	-		PFLU_RS06160	0.64	-1.9
1,377,995	-		PFLU_RS06160	0.64	-1.9
1,377,995	-		PFLU_RS06160	0.64	+0.7
1,377,995	-		PFLU_RS06160	0.64	-0.5
1,377,995	-		PFLU_RS06160	0.64	-1.4
1,377,995	-		PFLU_RS06160	0.64	+0.5
1,377,995	-		PFLU_RS06160	0.64	+1.9
1,377,995	-		PFLU_RS06160	0.64	-0.2
1,377,995	-		PFLU_RS06160	0.64	+1.3
1,377,995	-		PFLU_RS06160	0.64	-1.8
1,377,995	-		PFLU_RS06160	0.64	+0.5
1,377,995	-		PFLU_RS06160	0.64	+1.9
1,377,995	-		PFLU_RS06160	0.64	+1.7
1,377,995	-		PFLU_RS06160	0.64	-0.5
1,377,995	-		PFLU_RS06160	0.64	-0.1
1,377,995	-		PFLU_RS06160	0.64	+2.1
1,377,995	-		PFLU_RS06160	0.64	+1.8
1,377,995	-		PFLU_RS06160	0.64	-2.1
1,377,995	-		PFLU_RS06160	0.64	-0.5
1,377,995	-		PFLU_RS06160	0.64	-1.1
1,377,995	-		PFLU_RS06160	0.64	+0.3
1,377,995	-		PFLU_RS06160	0.64	+0.5
1,377,995	-		PFLU_RS06160	0.64	-0.9
1,377,995	-		PFLU_RS06160	0.64	+2.1
1,377,995	-		PFLU_RS06160	0.64	+1.1
1,377,995	-		PFLU_RS06160	0.64	-0.6
1,377,995	-		PFLU_RS06160	0.64	+1.9
1,377,995	-		PFLU_RS06160	0.64	-0.4
1,377,995	-		PFLU_RS06160	0.64	-0.6
1,377,995	-		PFLU_RS06160	0.64	-2.0
1,377,995	-		PFLU_RS06160	0.64	+1.8
1,377,995	-		PFLU_RS06160	0.64	+0.5
1,377,995	-		PFLU_RS06160	0.64	-1.6
1,377,995	-		PFLU_RS06160	0.64	-1.4
1,377,995	-		PFLU_RS06160	0.64	-0.2
1,377,995	-		PFLU_RS06160	0.64	+0.1
1,377,995	-		PFLU_RS06160	0.64	-0.5
1,377,995	-		PFLU_RS06160	0.64	+2.6
1,377,995	-		PFLU_RS06160	0.64	-2.4
1,377,995	-		PFLU_RS06160	0.64	-1.6
1,377,995	-		PFLU_RS06160	0.64	-1.3
1,377,995	-		PFLU_RS06160	0.64	-2.4
1,377,995	-		PFLU_RS06160	0.64	-2.1
1,377,996	+		PFLU_RS06160	0.64	+0.1
1,377,996	+		PFLU_RS06160	0.64	+0.1
1,377,996	+		PFLU_RS06160	0.64	+0.2
1,377,996	+		PFLU_RS06160	0.64	+1.7
1,377,996	+		PFLU_RS06160	0.64	+1.8
1,377,997	-		PFLU_RS06160	0.64	+0.6
1,377,997	-		PFLU_RS06160	0.64	-0.5
1,377,997	-		PFLU_RS06160	0.64	-0.9
1,378,080	+		PFLU_RS06160	0.76	-2.0
1,378,081	-		PFLU_RS06160	0.76	-2.2
1,378,081	-		PFLU_RS06160	0.76	-2.4
1,378,081	-		PFLU_RS06160	0.76	-0.2
1,378,117	-		PFLU_RS06160	0.81	+2.6
1,378,139	+		PFLU_RS06160	0.84	+1.6
1,378,186	+				-0.7
1,378,186	+				+1.4
1,378,187	-				-2.1
1,378,187	-				+1.5
1,378,187	-				-1.7
1,378,187	-				-0.2
1,378,221	+				-0.7
1,378,221	+				-0.2
1,378,298	+				-0.0
1,378,298	+				+2.1
1,378,298	+				+1.4
1,378,299	-				-0.6
1,378,299	-				+3.2
1,378,299	-				-1.6
1,378,299	-				-0.9
1,378,301	+				+2.9
1,378,301	+				+4.2
1,378,302	-				+1.0
1,378,302	-				+0.1
1,378,302	-				-1.7
1,378,462	+		PFLU_RS06165	0.34	+1.3
1,378,463	-		PFLU_RS06165	0.34	+1.1
1,378,463	-		PFLU_RS06165	0.34	+1.9
1,378,463	-		PFLU_RS06165	0.34	-1.2
1,378,463	-		PFLU_RS06165	0.34	-2.6