Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS21855 and BPHYT_RS21860 are separated by 778 nucleotides BPHYT_RS21860 and BPHYT_RS21865 are separated by 350 nucleotides
BPHYT_RS21855: BPHYT_RS21855 - hypothetical protein, at 456,949 to 457,716
_RS21855
BPHYT_RS21860: BPHYT_RS21860 - hypothetical protein, at 458,495 to 458,953
_RS21860
BPHYT_RS21865: BPHYT_RS21865 - chemotaxis protein, at 459,304 to 459,729
_RS21865
Position (kb)
458
459 Strain fitness (log2 ratio)
-1
0
1 at 457.559 kb on + strand, within BPHYT_RS21855 at 457.560 kb on - strand, within BPHYT_RS21855 at 457.560 kb on - strand at 457.560 kb on - strand, within BPHYT_RS21855 at 457.787 kb on + strand at 457.788 kb on - strand at 457.879 kb on - strand at 457.914 kb on + strand at 458.069 kb on + strand at 458.074 kb on - strand at 458.199 kb on - strand at 458.203 kb on + strand at 458.203 kb on + strand at 458.204 kb on - strand at 458.323 kb on + strand at 458.324 kb on - strand at 458.444 kb on + strand at 458.445 kb on - strand at 458.497 kb on - strand at 458.653 kb on - strand, within BPHYT_RS21860 at 459.012 kb on + strand at 459.059 kb on - strand at 459.253 kb on - strand at 459.278 kb on + strand at 459.699 kb on + strand at 459.800 kb on - strand at 459.871 kb on - strand at 459.881 kb on - strand at 459.929 kb on + strand at 459.930 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 457,559 + BPHYT_RS21855 0.79 +0.4 457,560 - BPHYT_RS21855 0.80 +1.0 457,560 - -1.2 457,560 - BPHYT_RS21855 0.80 -0.5 457,787 + -0.5 457,788 - -0.0 457,879 - +0.8 457,914 + -0.1 458,069 + -0.3 458,074 - +0.7 458,199 - -0.1 458,203 + +0.5 458,203 + -1.6 458,204 - +0.2 458,323 + -0.3 458,324 - +0.9 458,444 + -0.1 458,445 - -0.0 458,497 - -1.2 458,653 - BPHYT_RS21860 0.34 -0.8 459,012 + -0.7 459,059 - -0.3 459,253 - +0.5 459,278 + +0.1 459,699 + -1.3 459,800 - -0.1 459,871 - -0.2 459,881 - -1.0 459,929 + +0.0 459,930 - -0.3
Or see this region's nucleotide sequence