Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS15925

Experiment: 4-hydroxyphenylacetic 2 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-hydroxyphenylacetic 2 mM (C)
3,618,625	+				-1.7
3,618,626	-				-3.0
3,618,646	+				-3.7
3,618,646	+				-0.9
3,618,647	-				-1.2
3,618,647	-				+1.1
3,618,723	-				+1.1
3,618,814	+				-1.9
3,618,941	+				+0.8
3,618,941	+				-2.9
3,618,942	-				-1.7
3,619,163	+		PFLU_RS15920	0.42	-3.2
3,619,164	-		PFLU_RS15920	0.42	-2.9
3,619,164	-		PFLU_RS15920	0.42	-0.9
3,619,214	+		PFLU_RS15920	0.49	-0.4
3,619,214	+		PFLU_RS15920	0.49	-2.0
3,619,214	+		PFLU_RS15920	0.49	-1.2
3,619,214	+		PFLU_RS15920	0.49	-2.3
3,619,215	-		PFLU_RS15920	0.49	-2.6
3,619,215	-		PFLU_RS15920	0.49	-1.9
3,619,215	-		PFLU_RS15920	0.49	-3.7
3,619,215	-		PFLU_RS15920	0.49	-3.5
3,619,215	-		PFLU_RS15920	0.49	-2.3
3,619,215	-		PFLU_RS15920	0.49	-3.7
3,619,215	-		PFLU_RS15920	0.49	-0.4
3,619,215	-		PFLU_RS15920	0.49	-0.4
3,619,215	-		PFLU_RS15920	0.49	-2.4
3,619,217	+		PFLU_RS15920	0.50	-1.2
3,619,218	-		PFLU_RS15920	0.50	-2.6
3,619,325	+		PFLU_RS15920	0.66	-2.2
3,619,326	-		PFLU_RS15920	0.66	-1.4
3,619,326	-		PFLU_RS15920	0.66	-4.2
3,619,705	+		PFLU_RS15925	0.20	-1.7
3,619,705	+		PFLU_RS15925	0.20	-0.9
3,619,780	+		PFLU_RS15925	0.30	-2.0
3,619,825	+		PFLU_RS15925	0.36	-1.4
3,619,825	+		PFLU_RS15925	0.36	-1.9
3,619,825	+		PFLU_RS15925	0.36	-2.4
3,619,825	+		PFLU_RS15925	0.36	-1.4
3,619,825	+		PFLU_RS15925	0.36	-1.4
3,619,826	-		PFLU_RS15925	0.36	-1.9
3,619,826	-		PFLU_RS15925	0.36	-1.4
3,619,826	-		PFLU_RS15925	0.36	-2.0
3,619,826	-		PFLU_RS15925	0.36	-3.4
3,619,834	+		PFLU_RS15925	0.37	-0.9
3,619,835	-		PFLU_RS15925	0.37	-2.7
3,619,835	-		PFLU_RS15925	0.37	-1.2
3,619,903	+		PFLU_RS15925	0.46	-3.4
3,619,903	+		PFLU_RS15925	0.46	-3.0
3,619,916	-		PFLU_RS15925	0.48	-2.2
3,619,933	+		PFLU_RS15925	0.50	-3.5
3,619,934	-		PFLU_RS15925	0.50	-3.3
3,620,030	+		PFLU_RS15925	0.62	-2.3
3,620,031	-		PFLU_RS15925	0.63	-2.6
3,620,031	-		PFLU_RS15925	0.63	-2.6
3,620,144	-		PFLU_RS15925	0.77	-2.7
3,620,144	-		PFLU_RS15925	0.77	-3.7
3,620,219	+		PFLU_RS15925	0.87	-1.9
3,620,220	-		PFLU_RS15925	0.87	-1.7
3,620,220	-		PFLU_RS15925	0.87	-3.3
3,620,307	+				-2.3
3,620,382	+				-3.3
3,620,382	+				-2.9
3,620,712	+		PFLU_RS15930	0.26	-3.1
3,620,712	+		PFLU_RS15930	0.26	-3.3
3,620,712	+		PFLU_RS15930	0.26	-0.4
3,620,713	-		PFLU_RS15930	0.27	-2.4
3,620,713	-		PFLU_RS15930	0.27	-1.7
3,620,713	-		PFLU_RS15930	0.27	-2.6
3,620,713	-		PFLU_RS15930	0.27	-1.4
3,620,713	-		PFLU_RS15930	0.27	-2.6
3,620,713	-		PFLU_RS15930	0.27	-1.2
3,620,721	+		PFLU_RS15930	0.27	-2.7
3,620,985	-		PFLU_RS15930	0.45	-2.2
3,621,189	+		PFLU_RS15930	0.59	-1.1
3,621,281	+		PFLU_RS15930	0.65	-3.3
3,621,294	+		PFLU_RS15930	0.66	-1.2
3,621,312	+		PFLU_RS15930	0.68	-2.2
3,621,312	+		PFLU_RS15930	0.68	-1.4
3,621,312	+		PFLU_RS15930	0.68	-2.3
3,621,313	-		PFLU_RS15930	0.68	-2.0
3,621,313	-		PFLU_RS15930	0.68	-3.0