Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2893

Experiment: DAC16_cps7_0.1MOI

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	DAC16_cps7_0.1MOI
3,612,724	-		BT2892	0.46	-0.9
3,612,734	-		BT2892	0.47	-0.9
3,612,734	-		BT2892	0.47	+1.8
3,612,837	-		BT2892	0.53	+1.7
3,612,837	-		BT2892	0.53	+1.5
3,612,844	-		BT2892	0.53	-0.1
3,612,844	-		BT2892	0.53	-0.7
3,612,850	+		BT2892	0.53	+0.7
3,612,863	+		BT2892	0.54	-0.1
3,612,915	-		BT2892	0.57	-1.0
3,612,919	-		BT2892	0.58	-0.6
3,612,980	+		BT2892	0.61	-1.5
3,612,980	+		BT2892	0.61	-0.1
3,613,032	-		BT2892	0.64	-0.4
3,613,032	-		BT2892	0.64	-1.9
3,613,032	-		BT2892	0.64	-1.4
3,613,032	-		BT2892	0.64	-1.1
3,613,032	-		BT2892	0.64	-1.4
3,613,034	-		BT2892	0.64	-2.7
3,613,047	-		BT2892	0.65	+1.9
3,613,054	+		BT2892	0.65	-1.7
3,613,132	+		BT2892	0.70	+1.1
3,613,137	-		BT2892	0.70	+0.8
3,613,172	+		BT2892	0.72	-0.3
3,613,173	-		BT2892	0.72	-1.1
3,613,173	-		BT2892	0.72	+1.5
3,613,175	+		BT2892	0.72	+0.3
3,613,190	+		BT2892	0.73	+0.6
3,613,204	-		BT2892	0.74	+0.6
3,613,226	-		BT2892	0.75	+1.7
3,613,229	+		BT2892	0.76	-0.9
3,613,229	+		BT2892	0.76	+1.0
3,613,277	+		BT2892	0.78	-0.5
3,613,319	+		BT2892	0.81	+0.1
3,613,319	+		BT2892	0.81	+0.9
3,613,319	+		BT2892	0.81	-0.4
3,613,355	+		BT2892	0.83	-1.0
3,613,359	-		BT2892	0.83	-0.1
3,613,370	+		BT2892	0.84	-1.7
3,613,394	+		BT2892	0.85	-0.7
3,613,395	-		BT2892	0.85	-1.7
3,613,400	-		BT2892	0.86	-0.7
3,613,409	-		BT2892	0.86	-1.5
3,613,424	+		BT2892	0.87	-1.2
3,613,424	+		BT2892	0.87	+1.0
3,613,424	+		BT2892	0.87	+1.3
3,613,540	+				+3.3
3,613,540	+				-0.7
3,613,541	-				-0.9
3,613,596	-				-1.2
3,613,651	+				+0.1
3,613,652	-				-1.4
3,613,652	-				-0.8
3,613,652	-				+1.2
3,613,664	-				+0.3
3,613,665	+				-0.1
3,613,694	+				-0.7
3,613,702	+				-0.1
3,613,722	-				-0.7
3,613,745	+				-0.2
3,613,783	+				-0.6
3,613,845	+				-1.0
3,613,846	-				-1.5
3,613,850	+				-1.1
3,613,851	-				-2.1
3,613,855	+				-0.1
3,613,856	-				-1.0
3,613,862	-				-0.9
3,613,868	+				+0.4
3,613,871	-				+0.9
3,613,871	-				+0.9
3,613,886	-				-0.9
3,613,887	+				+0.2
3,613,984	+		BT2893	0.14	-0.7
3,613,999	+		BT2893	0.15	-1.1
3,613,999	+		BT2893	0.15	-0.7
3,614,058	-		BT2893	0.18	+1.2
3,614,062	-		BT2893	0.18	+3.7
3,614,067	+		BT2893	0.18	+0.2
3,614,067	+		BT2893	0.18	-0.9
3,614,067	+		BT2893	0.18	-2.1
3,614,067	+		BT2893	0.18	-0.6
3,614,067	+		BT2893	0.18	-2.5
3,614,068	-		BT2893	0.18	-1.0
3,614,068	-		BT2893	0.18	-0.0
3,614,068	-		BT2893	0.18	+0.6
3,614,069	+		BT2893	0.18	+0.3
3,614,070	-		BT2893	0.18	-0.1
3,614,070	-		BT2893	0.18	+0.3
3,614,070	-		BT2893	0.18	-0.3
3,614,070	-		BT2893	0.18	-0.4
3,614,177	-		BT2893	0.24	-0.3
3,614,186	+		BT2893	0.25	-2.4
3,614,187	-		BT2893	0.25	-0.7
3,614,187	-		BT2893	0.25	+1.3
3,614,213	+		BT2893	0.26	-2.4
3,614,217	+		BT2893	0.26	-1.9
3,614,252	-		BT2893	0.28	-0.1
3,614,254	+		BT2893	0.28	-0.1
3,614,254	+		BT2893	0.28	+0.6
3,614,328	+		BT2893	0.32	-1.2
3,614,352	+		BT2893	0.33	-0.1
3,614,356	+		BT2893	0.34	-0.7
3,614,359	+		BT2893	0.34	+1.3
3,614,361	+		BT2893	0.34	-0.9
3,614,362	-		BT2893	0.34	-1.1
3,614,435	+		BT2893	0.38	+0.6
3,614,437	+		BT2893	0.38	+0.8
3,614,455	+		BT2893	0.39	-0.4
3,614,455	+		BT2893	0.39	+1.5
3,614,456	-		BT2893	0.39	-0.6
3,614,456	-		BT2893	0.39	-0.7
3,614,543	-		BT2893	0.44	+0.9
3,614,575	+		BT2893	0.45	+1.9
3,614,586	+		BT2893	0.46	-1.4
3,614,586	+		BT2893	0.46	+0.1
3,614,587	-		BT2893	0.46	+0.4
3,614,614	+		BT2893	0.47	-0.6
3,614,648	+		BT2893	0.49	+0.6
3,614,648	+		BT2893	0.49	-0.7
3,614,657	-		BT2893	0.50	+0.1
3,614,658	+		BT2893	0.50	-1.2
3,614,659	-		BT2893	0.50	-0.1
3,614,721	-		BT2893	0.53	-1.7
3,614,725	+		BT2893	0.53	-0.9
3,614,726	-		BT2893	0.53	+0.9
3,614,768	-		BT2893	0.56	-1.1
3,614,798	-		BT2893	0.57	-0.1
3,614,798	-		BT2893	0.57	+0.5
3,614,798	-		BT2893	0.57	-0.4
3,614,824	-		BT2893	0.59	+0.6
3,614,859	+		BT2893	0.61	-0.3
3,614,914	-		BT2893	0.63	+1.5
3,614,914	-		BT2893	0.63	-0.1
3,614,947	+		BT2893	0.65	+1.6
3,614,949	+		BT2893	0.65	+1.5
3,615,022	+		BT2893	0.69	+0.7
3,615,036	+		BT2893	0.70	+0.2
3,615,064	+		BT2893	0.71	-2.8
3,615,076	+		BT2893	0.72	-1.6
3,615,082	+		BT2893	0.72	-0.7
3,615,143	+		BT2893	0.76	+1.3
3,615,179	+		BT2893	0.78	-2.4
3,615,179	+		BT2893	0.78	-1.7
3,615,180	-		BT2893	0.78	+0.4
3,615,180	-		BT2893	0.78	-1.3
3,615,180	-		BT2893	0.78	-2.4
3,615,185	+		BT2893	0.78	-1.0
3,615,188	-		BT2893	0.78	-0.4
3,615,206	-		BT2893	0.79	-1.1
3,615,218	-		BT2893	0.80	-0.2
3,615,225	+		BT2893	0.80	+0.3
3,615,246	+		BT2893	0.81	+0.7
3,615,247	-		BT2893	0.81	+0.9
3,615,283	+		BT2893	0.83	+0.8
3,615,283	+		BT2893	0.83	+1.5
3,615,283	+		BT2893	0.83	+0.7
3,615,325	-		BT2893	0.85	+2.4
3,615,381	+		BT2893	0.88	-0.3
3,615,394	+		BT2893	0.89	+1.5
3,615,395	-		BT2893	0.89	-0.7
3,615,395	-		BT2893	0.89	-1.6
3,615,396	+		BT2893	0.89	-0.9
3,615,396	+		BT2893	0.89	+0.4
3,615,397	-		BT2893	0.89	-0.8
3,615,397	-		BT2893	0.89	+0.8
3,615,397	-		BT2893	0.89	-2.1
3,615,401	-		BT2893	0.89	+0.9
3,615,401	-		BT2893	0.89	-1.4
3,615,477	-				-1.5
3,615,524	-				-1.2
3,615,524	-				-1.7
3,615,604	+				-0.6
3,615,605	-				+0.3
3,615,636	+				+0.8
3,615,660	+				+0.8
3,615,664	+				-2.4
3,615,664	+				+0.5
3,615,665	-				+1.9
3,615,665	-				+1.0
3,615,688	+				-1.1
3,615,730	-				-1.6
3,615,748	-				-1.9
3,615,753	+				-2.1
3,615,786	+				+0.1
3,615,787	-				-0.1
3,615,787	-				-3.5
3,615,789	-				-0.5
3,615,818	+				-0.7
3,615,828	+				+0.9
3,615,835	-				-1.0
3,615,837	-				+1.7
3,615,837	-				-0.4
3,615,858	+				-1.0
3,615,864	-				-0.3
3,615,867	+				+0.7
3,615,868	-				-1.4
3,615,871	-				+0.3
3,615,885	+				-2.0
3,615,890	+				+0.5
3,615,901	-				-0.1
3,615,901	-				+0.5
3,615,928	-				+2.5
3,616,053	+		BT2894	0.15	-0.1
3,616,095	+		BT2894	0.16	+0.5
3,616,110	+		BT2894	0.16	-1.1
3,616,115	-		BT2894	0.17	-0.9
3,616,151	-		BT2894	0.18	+0.9
3,616,185	+		BT2894	0.19	-1.3
3,616,302	-		BT2894	0.23	+0.5
3,616,330	-		BT2894	0.24	-1.4
3,616,335	+		BT2894	0.24	-1.1
3,616,363	+		BT2894	0.25	-1.4
3,616,364	-		BT2894	0.25	-0.1
3,616,376	-		BT2894	0.25	+1.9
3,616,419	+		BT2894	0.27	+0.6
3,616,458	+		BT2894	0.28	+0.9
3,616,483	+		BT2894	0.29	-0.5
3,616,512	+		BT2894	0.30	+0.3
3,616,534	+		BT2894	0.30	-2.1
3,616,535	-		BT2894	0.30	+0.9
3,616,568	-		BT2894	0.31	-0.7