Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS28600

Experiment: acetate 30 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate 30 mM (C)
6,362,250	+				-0.5
6,362,324	+		PFLU_RS28595	0.11	-0.8
6,362,325	-		PFLU_RS28595	0.11	-2.1
6,362,393	+		PFLU_RS28595	0.18	-1.1
6,362,393	+		PFLU_RS28595	0.18	+1.1
6,362,393	+		PFLU_RS28595	0.18	+0.5
6,362,393	+		PFLU_RS28595	0.18	-1.1
6,362,393	+		PFLU_RS28595	0.18	-1.6
6,362,393	+		PFLU_RS28595	0.18	+1.5
6,362,393	+		PFLU_RS28595	0.18	-0.3
6,362,393	+		PFLU_RS28595	0.18	-1.2
6,362,393	+		PFLU_RS28595	0.18	-0.1
6,362,393	+		PFLU_RS28595	0.18	+0.9
6,362,393	+		PFLU_RS28595	0.18	+0.4
6,362,394	-		PFLU_RS28595	0.18	-0.1
6,362,394	-		PFLU_RS28595	0.18	+0.4
6,362,394	-		PFLU_RS28595	0.18	+0.1
6,362,394	-		PFLU_RS28595	0.18	-0.2
6,362,394	-		PFLU_RS28595	0.18	+1.7
6,362,394	-		PFLU_RS28595	0.18	-1.5
6,362,394	-		PFLU_RS28595	0.18	+1.4
6,362,394	-		PFLU_RS28595	0.18	+0.4
6,362,394	-		PFLU_RS28595	0.18	+0.1
6,362,394	-		PFLU_RS28595	0.18	+2.3
6,362,394	-		PFLU_RS28595	0.18	+0.6
6,362,633	+		PFLU_RS28595	0.41	-1.9
6,362,633	+		PFLU_RS28595	0.41	-1.8
6,362,633	+		PFLU_RS28595	0.41	+1.9
6,362,633	+		PFLU_RS28595	0.41	-0.9
6,362,634	-		PFLU_RS28595	0.42	-0.1
6,362,634	-		PFLU_RS28595	0.42	+1.4
6,362,666	+		PFLU_RS28595	0.45	+0.1
6,362,666	+		PFLU_RS28595	0.45	-2.3
6,362,666	+		PFLU_RS28595	0.45	+0.6
6,362,666	+		PFLU_RS28595	0.45	+1.8
6,362,666	+		PFLU_RS28595	0.45	-0.4
6,362,666	+		PFLU_RS28595	0.45	+1.9
6,362,666	+		PFLU_RS28595	0.45	-0.1
6,362,667	-		PFLU_RS28595	0.45	-1.9
6,362,667	-		PFLU_RS28595	0.45	-2.8
6,362,667	-		PFLU_RS28595	0.45	-0.1
6,362,667	-		PFLU_RS28595	0.45	-0.2
6,362,667	-		PFLU_RS28595	0.45	+1.6
6,362,667	-		PFLU_RS28595	0.45	-0.6
6,362,667	-		PFLU_RS28595	0.45	+0.1
6,362,667	-		PFLU_RS28595	0.45	-1.6
6,362,667	-		PFLU_RS28595	0.45	-0.6
6,362,746	-		PFLU_RS28595	0.52	-0.9
6,362,768	+		PFLU_RS28595	0.55	-0.6
6,362,768	+		PFLU_RS28595	0.55	+1.3
6,362,768	+		PFLU_RS28595	0.55	-1.6
6,362,768	+		PFLU_RS28595	0.55	-1.8
6,362,769	-		PFLU_RS28595	0.55	+0.9
6,362,903	+		PFLU_RS28595	0.68	-0.9
6,362,903	+		PFLU_RS28595	0.68	-0.8
6,362,904	-		PFLU_RS28595	0.68	+1.8
6,362,904	-		PFLU_RS28595	0.68	+0.1
6,362,904	-		PFLU_RS28595	0.68	-1.6
6,362,939	+		PFLU_RS28595	0.71	+1.1
6,362,939	+		PFLU_RS28595	0.71	-2.1
6,362,939	+		PFLU_RS28595	0.71	-1.1
6,362,939	+		PFLU_RS28595	0.71	-1.0
6,362,939	+		PFLU_RS28595	0.71	-1.4
6,362,939	+		PFLU_RS28595	0.71	+0.9
6,362,939	+		PFLU_RS28595	0.71	-1.9
6,362,939	+		PFLU_RS28595	0.71	-2.8
6,362,939	+		PFLU_RS28595	0.71	-1.9
6,362,939	+		PFLU_RS28595	0.71	+1.4
6,362,939	+		PFLU_RS28595	0.71	-0.1
6,362,939	+		PFLU_RS28595	0.71	+1.3
6,362,939	+		PFLU_RS28595	0.71	-0.6
6,362,939	+		PFLU_RS28595	0.71	+2.7
6,362,939	+		PFLU_RS28595	0.71	+0.6
6,362,940	-		PFLU_RS28595	0.71	-1.1
6,362,940	-		PFLU_RS28595	0.71	+0.4
6,362,940	-		PFLU_RS28595	0.71	+1.5
6,362,940	-		PFLU_RS28595	0.71	-1.6
6,362,940	-		PFLU_RS28595	0.71	+0.8
6,362,940	-		PFLU_RS28595	0.71	-1.1
6,362,940	-		PFLU_RS28595	0.71	-0.7
6,362,940	-		PFLU_RS28595	0.71	+0.3
6,362,940	-		PFLU_RS28595	0.71	-2.8
6,362,940	-		PFLU_RS28595	0.71	-2.2
6,362,940	-		PFLU_RS28595	0.71	+0.9
6,362,940	-		PFLU_RS28595	0.71	-0.4
6,362,940	-		PFLU_RS28595	0.71	-0.3
6,362,940	-		PFLU_RS28595	0.71	-0.8
6,362,940	-		PFLU_RS28595	0.71	+0.2
6,362,940	-		PFLU_RS28595	0.71	-1.7
6,362,940	-		PFLU_RS28595	0.71	+1.8
6,362,940	-		PFLU_RS28595	0.71	-0.6
6,362,940	-		PFLU_RS28595	0.71	+1.8
6,362,940	-		PFLU_RS28595	0.71	+5.1
6,363,114	+		PFLU_RS28595	0.88	-0.5
6,363,114	+		PFLU_RS28595	0.88	-0.6
6,363,114	+		PFLU_RS28595	0.88	+0.7
6,363,114	+		PFLU_RS28595	0.88	-0.8
6,363,114	+		PFLU_RS28595	0.88	+0.6
6,363,114	+		PFLU_RS28595	0.88	+1.4
6,363,114	+		PFLU_RS28595	0.88	+0.7
6,363,114	+		PFLU_RS28595	0.88	-1.0
6,363,115	-		PFLU_RS28595	0.89	-0.6
6,363,115	-		PFLU_RS28595	0.89	-2.1
6,363,115	-		PFLU_RS28595	0.89	-1.8
6,363,115	-		PFLU_RS28595	0.89	+1.3
6,363,115	-		PFLU_RS28595	0.89	-1.2
6,363,115	-		PFLU_RS28595	0.89	-1.8
6,363,116	+		PFLU_RS28595	0.89	+2.6
6,363,116	+		PFLU_RS28595	0.89	-0.5
6,363,116	+		PFLU_RS28595	0.89	-1.7
6,363,116	+		PFLU_RS28595	0.89	+0.8
6,363,116	+		PFLU_RS28595	0.89	-1.8
6,363,116	+		PFLU_RS28595	0.89	+1.4
6,363,116	+		PFLU_RS28595	0.89	+0.8
6,363,116	+		PFLU_RS28595	0.89	-2.0
6,363,116	+		PFLU_RS28595	0.89	+2.4
6,363,116	+		PFLU_RS28595	0.89	-1.6
6,363,117	-		PFLU_RS28595	0.89	-0.8
6,363,117	-		PFLU_RS28595	0.89	-0.5
6,363,117	-		PFLU_RS28595	0.89	-0.3
6,363,117	-		PFLU_RS28595	0.89	-0.9
6,363,117	-		PFLU_RS28595	0.89	-1.8
6,363,117	-		PFLU_RS28595	0.89	-0.8
6,363,117	-		PFLU_RS28595	0.89	+1.8
6,363,117	-		PFLU_RS28595	0.89	-0.6
6,363,117	-		PFLU_RS28595	0.89	+1.0
6,363,117	-		PFLU_RS28595	0.89	-2.1
6,363,117	-		PFLU_RS28595	0.89	-1.4
6,363,117	-		PFLU_RS28595	0.89	+1.2
6,363,117	-		PFLU_RS28595	0.89	+1.3
6,363,117	-		PFLU_RS28595	0.89	+0.3
6,363,117	-		PFLU_RS28595	0.89	+1.5
6,363,117	-		PFLU_RS28595	0.89	+0.7
6,363,117	-		PFLU_RS28595	0.89	-0.1
6,363,117	-		PFLU_RS28595	0.89	-2.1
6,363,117	-		PFLU_RS28595	0.89	-0.4
6,363,117	-		PFLU_RS28595	0.89	+0.8
6,363,117	-		PFLU_RS28595	0.89	-1.2
6,363,117	-		PFLU_RS28595	0.89	-0.9
6,363,117	-		PFLU_RS28595	0.89	-0.6
6,363,149	+				-0.1
6,363,149	+				-0.5
6,363,149	+				+0.7
6,363,149	+				-1.9
6,363,150	-				+1.9
6,363,150	-				-0.2
6,363,150	-				+1.6
6,363,150	-				-1.6
6,363,199	+				-1.9
6,363,199	+				-2.4
6,363,199	+				-0.2
6,363,199	+				-1.1
6,363,251	+				+0.6
6,363,400	-				+1.3
6,363,440	+		PFLU_RS28600	0.11	+2.7
6,363,440	+		PFLU_RS28600	0.11	-1.0
6,363,440	+		PFLU_RS28600	0.11	-0.6
6,363,440	+		PFLU_RS28600	0.11	-0.1
6,363,440	+		PFLU_RS28600	0.11	-1.0
6,363,441	-		PFLU_RS28600	0.11	-0.4
6,363,441	-		PFLU_RS28600	0.11	+0.4
6,363,441	-		PFLU_RS28600	0.11	-0.1
6,363,488	+		PFLU_RS28600	0.14	-0.9
6,363,488	+		PFLU_RS28600	0.14	+0.9
6,363,489	-		PFLU_RS28600	0.14	-1.5
6,363,542	+		PFLU_RS28600	0.17	-0.5
6,363,542	+		PFLU_RS28600	0.17	+3.1
6,363,543	-		PFLU_RS28600	0.17	+1.7
6,363,543	-		PFLU_RS28600	0.17	-2.1
6,363,543	-		PFLU_RS28600	0.17	+1.3
6,363,543	-		PFLU_RS28600	0.17	-1.6
6,363,644	+		PFLU_RS28600	0.23	+0.6
6,363,644	+		PFLU_RS28600	0.23	+1.2
6,363,644	+		PFLU_RS28600	0.23	-0.5
6,363,644	+		PFLU_RS28600	0.23	-0.0
6,363,645	-		PFLU_RS28600	0.23	+1.6
6,363,645	-		PFLU_RS28600	0.23	-1.8
6,363,687	-		PFLU_RS28600	0.26	-0.4
6,363,731	+		PFLU_RS28600	0.28	+1.9
6,363,731	+		PFLU_RS28600	0.28	-0.0
6,363,731	+		PFLU_RS28600	0.28	-1.0
6,363,731	+		PFLU_RS28600	0.28	-1.6
6,363,731	+		PFLU_RS28600	0.28	-0.9
6,363,731	+		PFLU_RS28600	0.28	+0.9
6,363,731	+		PFLU_RS28600	0.28	+0.9
6,363,731	+		PFLU_RS28600	0.28	+0.9
6,363,731	+		PFLU_RS28600	0.28	+1.4
6,363,732	-		PFLU_RS28600	0.28	-0.2
6,363,833	+		PFLU_RS28600	0.34	-0.5
6,363,833	+		PFLU_RS28600	0.34	-2.6
6,363,834	-		PFLU_RS28600	0.34	-2.1
6,363,834	-		PFLU_RS28600	0.34	-0.1
6,363,834	-		PFLU_RS28600	0.34	-0.9
6,363,903	-		PFLU_RS28600	0.38	-3.0
6,363,941	+		PFLU_RS28600	0.40	-0.8
6,363,941	+		PFLU_RS28600	0.40	+1.9
6,363,941	+		PFLU_RS28600	0.40	-0.9
6,363,942	-		PFLU_RS28600	0.41	-1.1
6,363,968	+		PFLU_RS28600	0.42	+1.7
6,363,968	+		PFLU_RS28600	0.42	-2.5
6,363,968	+		PFLU_RS28600	0.42	-0.3
6,363,968	+		PFLU_RS28600	0.42	+2.6
6,363,968	+		PFLU_RS28600	0.42	+0.6
6,363,969	-		PFLU_RS28600	0.42	+1.7
6,363,969	-		PFLU_RS28600	0.42	+1.8
6,363,969	-		PFLU_RS28600	0.42	+1.4
6,363,969	-		PFLU_RS28600	0.42	-0.9
6,363,969	-		PFLU_RS28600	0.42	-0.9
6,363,995	+		PFLU_RS28600	0.44	-0.8
6,363,995	+		PFLU_RS28600	0.44	-0.3
6,363,995	+		PFLU_RS28600	0.44	+0.5
6,363,995	+		PFLU_RS28600	0.44	+1.4
6,363,995	+		PFLU_RS28600	0.44	+1.9
6,363,996	-		PFLU_RS28600	0.44	+0.9
6,363,996	-		PFLU_RS28600	0.44	+0.9
6,364,047	+		PFLU_RS28600	0.47	-3.0
6,364,055	+		PFLU_RS28600	0.47	-1.7
6,364,056	-		PFLU_RS28600	0.47	+0.2
6,364,056	-		PFLU_RS28600	0.47	+0.8
6,364,056	-		PFLU_RS28600	0.47	+0.1
6,364,056	-		PFLU_RS28600	0.47	+4.0
6,364,235	+		PFLU_RS28600	0.58	+0.2
6,364,236	-		PFLU_RS28600	0.58	+1.3
6,364,260	-		PFLU_RS28600	0.59	-1.6
6,364,308	+		PFLU_RS28600	0.62	-2.0
6,364,362	+		PFLU_RS28600	0.65	-1.0
6,364,362	+		PFLU_RS28600	0.65	-0.9
6,364,363	-		PFLU_RS28600	0.65	-1.2
6,364,363	-		PFLU_RS28600	0.65	-0.2
6,364,363	-		PFLU_RS28600	0.65	-0.8
6,364,475	+		PFLU_RS28600	0.72	+1.9
6,364,475	+		PFLU_RS28600	0.72	-0.3
6,364,475	+		PFLU_RS28600	0.72	-0.4
6,364,475	+		PFLU_RS28600	0.72	-0.6
6,364,475	+		PFLU_RS28600	0.72	-0.2
6,364,475	+		PFLU_RS28600	0.72	-0.3
6,364,475	+		PFLU_RS28600	0.72	+0.1
6,364,476	-		PFLU_RS28600	0.72	+0.1
6,364,476	-		PFLU_RS28600	0.72	-2.5
6,364,476	-		PFLU_RS28600	0.72	-0.6
6,364,476	-		PFLU_RS28600	0.72	+1.4
6,364,476	-		PFLU_RS28600	0.72	+0.0
6,364,476	-		PFLU_RS28600	0.72	-1.0
6,364,476	-		PFLU_RS28600	0.72	-0.3
6,364,476	-		PFLU_RS28600	0.72	+0.5
6,364,476	-		PFLU_RS28600	0.72	+1.2
6,364,476	-		PFLU_RS28600	0.72	-0.7
6,364,476	-		PFLU_RS28600	0.72	+1.2
6,364,511	+		PFLU_RS28600	0.74	-2.1
6,364,511	+		PFLU_RS28600	0.74	-1.8
6,364,511	+		PFLU_RS28600	0.74	-0.9
6,364,511	+		PFLU_RS28600	0.74	+0.1
6,364,511	+		PFLU_RS28600	0.74	-0.4
6,364,511	+		PFLU_RS28600	0.74	-0.1
6,364,511	+		PFLU_RS28600	0.74	+1.0
6,364,512	-		PFLU_RS28600	0.74	+1.5
6,364,512	-		PFLU_RS28600	0.74	-0.1
6,364,512	-		PFLU_RS28600	0.74	+0.8
6,364,512	-		PFLU_RS28600	0.74	-2.0
6,364,512	-		PFLU_RS28600	0.74	-1.5
6,364,512	-		PFLU_RS28600	0.74	+2.4
6,364,515	+		PFLU_RS28600	0.74	-2.7
6,364,515	+		PFLU_RS28600	0.74	+2.2
6,364,515	+		PFLU_RS28600	0.74	-1.0
6,364,515	+		PFLU_RS28600	0.74	-0.5
6,364,515	+		PFLU_RS28600	0.74	-2.2
6,364,515	+		PFLU_RS28600	0.74	+2.0
6,364,515	+		PFLU_RS28600	0.74	-0.6
6,364,515	+		PFLU_RS28600	0.74	-1.0
6,364,515	+		PFLU_RS28600	0.74	+1.9
6,364,515	+		PFLU_RS28600	0.74	+0.8
6,364,515	+		PFLU_RS28600	0.74	-2.4
6,364,515	+		PFLU_RS28600	0.74	+0.4
6,364,516	-		PFLU_RS28600	0.74	-0.1
6,364,516	-		PFLU_RS28600	0.74	+0.9
6,364,516	-		PFLU_RS28600	0.74	-1.8
6,364,516	-		PFLU_RS28600	0.74	-0.9
6,364,516	-		PFLU_RS28600	0.74	-2.8
6,364,516	-		PFLU_RS28600	0.74	-1.6
6,364,516	-		PFLU_RS28600	0.74	-1.0
6,364,516	-		PFLU_RS28600	0.74	-1.0
6,364,516	-		PFLU_RS28600	0.74	-2.1
6,364,516	-		PFLU_RS28600	0.74	-0.6
6,364,516	-		PFLU_RS28600	0.74	-0.6
6,364,516	-		PFLU_RS28600	0.74	-0.8
6,364,562	+		PFLU_RS28600	0.77	-1.5
6,364,563	-		PFLU_RS28600	0.77	+2.5
6,364,563	-		PFLU_RS28600	0.77	+0.8
6,364,563	-		PFLU_RS28600	0.77	-0.1
6,364,563	-		PFLU_RS28600	0.77	+0.5
6,364,563	-		PFLU_RS28600	0.77	-2.7
6,364,563	-		PFLU_RS28600	0.77	+0.7
6,364,563	-		PFLU_RS28600	0.77	-2.1
6,364,650	+		PFLU_RS28600	0.82	-1.5
6,364,650	+		PFLU_RS28600	0.82	+0.6
6,364,650	+		PFLU_RS28600	0.82	-2.1
6,364,650	+		PFLU_RS28600	0.82	+2.6
6,364,650	+		PFLU_RS28600	0.82	-0.4
6,364,650	+		PFLU_RS28600	0.82	-1.6
6,364,650	+		PFLU_RS28600	0.82	+1.5
6,364,650	+		PFLU_RS28600	0.82	-0.6
6,364,650	+		PFLU_RS28600	0.82	+1.0
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6,364,665	-		PFLU_RS28600	0.83	+1.0
6,364,676	+		PFLU_RS28600	0.84	+1.2
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6,364,900	-				+0.0
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6,365,676	-		PFLU_RS28605	0.67	-0.1
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6,365,818	-		PFLU_RS28605	0.81	-0.4
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6,365,951	-				+1.1