Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS26300

Experiment: acetate 30 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate 30 mM (C)
5,881,278	+				-1.3
5,881,279	-				-1.1
5,881,279	-				-2.3
5,881,279	-				-1.7
5,881,279	-				-0.2
5,881,299	+				+1.6
5,881,299	+				+0.6
5,881,299	+				+1.9
5,881,299	+				-1.3
5,881,299	+				-0.7
5,881,299	+				+0.2
5,881,300	-				-1.1
5,881,300	-				-3.0
5,881,300	-				-0.2
5,881,300	-				+1.1
5,881,300	-				-1.8
5,881,300	-				-1.6
5,881,300	-				-1.0
5,881,300	-				-0.9
5,881,300	-				-0.6
5,881,300	-				-0.4
5,881,300	-				-1.7
5,881,383	-				-0.1
5,881,435	+		PFLU_RS26295	0.14	-3.1
5,881,477	+		PFLU_RS26295	0.23	+1.4
5,881,477	+		PFLU_RS26295	0.23	-0.4
5,881,477	+		PFLU_RS26295	0.23	-3.0
5,881,477	+		PFLU_RS26295	0.23	-2.8
5,881,477	+		PFLU_RS26295	0.23	+0.8
5,881,477	+		PFLU_RS26295	0.23	+0.9
5,881,477	+		PFLU_RS26295	0.23	+1.3
5,881,477	+		PFLU_RS26295	0.23	-0.1
5,881,477	+		PFLU_RS26295	0.23	+2.6
5,881,477	+		PFLU_RS26295	0.23	-0.1
5,881,477	+		PFLU_RS26295	0.23	-1.1
5,881,477	+		PFLU_RS26295	0.23	-2.4
5,881,477	+		PFLU_RS26295	0.23	+1.6
5,881,477	+		PFLU_RS26295	0.23	-1.3
5,881,477	+		PFLU_RS26295	0.23	+0.9
5,881,477	+		PFLU_RS26295	0.23	+1.2
5,881,477	+		PFLU_RS26295	0.23	-0.5
5,881,477	+		PFLU_RS26295	0.23	-0.1
5,881,477	+		PFLU_RS26295	0.23	-1.7
5,881,477	+		PFLU_RS26295	0.23	-2.0
5,881,477	+		PFLU_RS26295	0.23	-0.4
5,881,477	+		PFLU_RS26295	0.23	-0.3
5,881,477	+		PFLU_RS26295	0.23	+0.6
5,881,478	-		PFLU_RS26295	0.23	+2.6
5,881,478	-		PFLU_RS26295	0.23	-2.0
5,881,478	-		PFLU_RS26295	0.23	+0.3
5,881,478	-		PFLU_RS26295	0.23	-0.8
5,881,478	-		PFLU_RS26295	0.23	+2.5
5,881,478	-		PFLU_RS26295	0.23	-1.4
5,881,478	-		PFLU_RS26295	0.23	+2.5
5,881,478	-		PFLU_RS26295	0.23	-1.2
5,881,478	-		PFLU_RS26295	0.23	+0.9
5,881,478	-		PFLU_RS26295	0.23	+0.6
5,881,478	-		PFLU_RS26295	0.23	+0.5
5,881,478	-		PFLU_RS26295	0.23	-0.7
5,881,478	-		PFLU_RS26295	0.23	+0.3
5,881,478	-		PFLU_RS26295	0.23	-2.5
5,881,478	-		PFLU_RS26295	0.23	+1.3
5,881,478	-		PFLU_RS26295	0.23	-1.7
5,881,478	-		PFLU_RS26295	0.23	-0.1
5,881,478	-		PFLU_RS26295	0.23	+0.8
5,881,478	-		PFLU_RS26295	0.23	+0.3
5,881,478	-		PFLU_RS26295	0.23	-1.5
5,881,478	-		PFLU_RS26295	0.23	-1.4
5,881,478	-		PFLU_RS26295	0.23	-1.6
5,881,478	-		PFLU_RS26295	0.23	-0.1
5,881,483	+		PFLU_RS26295	0.24	+1.9
5,881,483	+		PFLU_RS26295	0.24	-2.2
5,881,483	+		PFLU_RS26295	0.24	+1.1
5,881,483	+		PFLU_RS26295	0.24	+1.8
5,881,483	+		PFLU_RS26295	0.24	-1.8
5,881,483	+		PFLU_RS26295	0.24	+0.7
5,881,483	+		PFLU_RS26295	0.24	+1.9
5,881,483	+		PFLU_RS26295	0.24	-0.2
5,881,483	+		PFLU_RS26295	0.24	-0.6
5,881,483	+		PFLU_RS26295	0.24	-0.4
5,881,483	+		PFLU_RS26295	0.24	+2.1
5,881,483	+		PFLU_RS26295	0.24	+0.9
5,881,483	+		PFLU_RS26295	0.24	-0.9
5,881,483	+		PFLU_RS26295	0.24	-1.6
5,881,483	+		PFLU_RS26295	0.24	-0.1
5,881,483	+		PFLU_RS26295	0.24	-1.1
5,881,483	+		PFLU_RS26295	0.24	-2.1
5,881,484	-		PFLU_RS26295	0.25	-0.9
5,881,484	-		PFLU_RS26295	0.25	+0.5
5,881,484	-		PFLU_RS26295	0.25	-2.9
5,881,484	-		PFLU_RS26295	0.25	-1.3
5,881,484	-		PFLU_RS26295	0.25	+2.2
5,881,484	-		PFLU_RS26295	0.25	-0.4
5,881,484	-		PFLU_RS26295	0.25	-2.2
5,881,484	-		PFLU_RS26295	0.25	-0.9
5,881,574	+		PFLU_RS26295	0.45	-0.3
5,881,574	+		PFLU_RS26295	0.45	-0.7
5,881,574	+		PFLU_RS26295	0.45	+0.0
5,881,575	-		PFLU_RS26295	0.45	+0.2
5,881,575	-		PFLU_RS26295	0.45	+0.5
5,881,625	+		PFLU_RS26295	0.56	-1.4
5,881,625	+		PFLU_RS26295	0.56	-0.4
5,881,626	-		PFLU_RS26295	0.56	+3.2
5,881,643	+		PFLU_RS26295	0.60	+1.1
5,881,643	+		PFLU_RS26295	0.60	-0.1
5,881,643	+		PFLU_RS26295	0.60	-0.6
5,881,643	+		PFLU_RS26295	0.60	+1.5
5,881,643	+		PFLU_RS26295	0.60	-0.8
5,881,643	+		PFLU_RS26295	0.60	+0.2
5,881,644	-		PFLU_RS26295	0.60	+0.8
5,881,644	-		PFLU_RS26295	0.60	-0.9
5,881,644	-		PFLU_RS26295	0.60	-1.1
5,881,644	-		PFLU_RS26295	0.60	-2.1
5,881,644	-		PFLU_RS26295	0.60	-0.8
5,881,644	-		PFLU_RS26295	0.60	+1.1
5,881,644	-		PFLU_RS26295	0.60	-0.8
5,881,685	+		PFLU_RS26295	0.70	+0.1
5,881,686	-		PFLU_RS26295	0.70	-2.2
5,881,686	-		PFLU_RS26295	0.70	-0.7
5,881,686	-		PFLU_RS26295	0.70	-0.9
5,881,778	+				+2.3
5,881,779	-				-0.3
5,881,779	-				+0.8
5,881,794	+				-2.6
5,881,794	+				-0.1
5,881,794	+				-1.1
5,881,795	-				-1.7
5,881,795	-				+1.6
5,881,795	-				-3.0
5,881,840	+				-1.4
5,881,841	-				-2.2
5,881,855	+				+1.3
5,881,855	+				+2.8
5,881,855	+				+0.2
5,881,855	+				+0.2
5,881,855	+				-0.4
5,881,855	+				-0.5
5,881,855	+				+0.9
5,881,856	-				+0.1
5,881,856	-				+1.0
5,881,856	-				+1.6
5,881,880	+				+1.3
5,881,880	+				-0.4
5,881,880	+				+0.4
5,881,880	+				-0.4
5,881,880	+				+1.7
5,881,880	+				-0.1
5,881,881	-				-0.1
5,881,881	-				+1.6
5,881,881	-				+1.0
5,881,881	-				+1.3
5,881,881	-				+0.9
5,881,948	-				-0.5
5,882,084	+				+0.3
5,882,084	+				-0.1
5,882,084	+				+1.5
5,882,084	+				-0.2
5,882,084	+				+0.6
5,882,084	+				+0.9
5,882,084	+				-0.6
5,882,084	+				+0.1
5,882,084	+				-0.9
5,882,085	-				+3.5
5,882,085	-				+0.5
5,882,085	-				+0.3
5,882,085	-				-0.1
5,882,085	-				+1.9
5,882,085	-				-1.4
5,882,085	-				+0.1
5,882,204	+		PFLU_RS26300	0.16	+2.5
5,882,204	+		PFLU_RS26300	0.16	-0.0
5,882,205	-		PFLU_RS26300	0.16	-1.4
5,882,248	+		PFLU_RS26300	0.20	-0.0
5,882,248	+		PFLU_RS26300	0.20	+1.9
5,882,248	+		PFLU_RS26300	0.20	+2.5
5,882,249	-		PFLU_RS26300	0.20	+0.9
5,882,252	+		PFLU_RS26300	0.20	+2.9
5,882,252	+		PFLU_RS26300	0.20	+2.4
5,882,252	+		PFLU_RS26300	0.20	+0.7
5,882,253	-		PFLU_RS26300	0.20	-0.1
5,882,253	-		PFLU_RS26300	0.20	-1.7
5,882,253	-		PFLU_RS26300	0.20	+1.5
5,882,253	-		PFLU_RS26300	0.20	-1.7
5,882,253	-		PFLU_RS26300	0.20	-2.1
5,882,253	-		PFLU_RS26300	0.20	+1.3
5,882,253	-		PFLU_RS26300	0.20	+0.9
5,882,253	-		PFLU_RS26300	0.20	-0.0
5,882,308	+		PFLU_RS26300	0.24	+2.4
5,882,441	-		PFLU_RS26300	0.34	-0.7
5,882,852	-		PFLU_RS26300	0.66	-0.6
5,882,900	+		PFLU_RS26300	0.70	+0.3
5,882,900	+		PFLU_RS26300	0.70	-2.2
5,882,900	+		PFLU_RS26300	0.70	-0.4
5,882,900	+		PFLU_RS26300	0.70	-1.4
5,882,900	+		PFLU_RS26300	0.70	+1.3
5,882,900	+		PFLU_RS26300	0.70	-0.7
5,882,900	+		PFLU_RS26300	0.70	+1.8
5,882,901	-		PFLU_RS26300	0.70	+3.7
5,882,901	-		PFLU_RS26300	0.70	+2.0
5,882,901	-		PFLU_RS26300	0.70	+1.4
5,882,901	-		PFLU_RS26300	0.70	-0.3
5,882,901	-		PFLU_RS26300	0.70	-0.2
5,882,901	-		PFLU_RS26300	0.70	-2.7
5,882,901	-		PFLU_RS26300	0.70	-0.4
5,883,021	-		PFLU_RS26300	0.79	-0.6
5,883,021	-		PFLU_RS26300	0.79	+2.4
5,883,146	+		PFLU_RS26300	0.89	+2.7
5,883,146	+		PFLU_RS26300	0.89	+1.4
5,883,146	+		PFLU_RS26300	0.89	+2.4
5,883,146	+		PFLU_RS26300	0.89	-0.1
5,883,146	+		PFLU_RS26300	0.89	-2.5
5,883,146	+		PFLU_RS26300	0.89	+0.9
5,883,146	+		PFLU_RS26300	0.89	+1.4
5,883,147	-		PFLU_RS26300	0.89	-1.2
5,883,147	-		PFLU_RS26300	0.89	-0.4
5,883,147	-		PFLU_RS26300	0.89	-2.2
5,883,147	-		PFLU_RS26300	0.89	+1.0
5,883,147	-		PFLU_RS26300	0.89	-0.1
5,883,147	-		PFLU_RS26300	0.89	-1.7
5,883,147	-		PFLU_RS26300	0.89	-0.1
5,883,147	-		PFLU_RS26300	0.89	-1.3
5,883,147	-		PFLU_RS26300	0.89	-1.3
5,883,147	-		PFLU_RS26300	0.89	+0.1
5,883,261	+				+2.1
5,883,261	+				+0.4
5,883,262	-				+0.3
5,883,262	-				-0.1
5,883,262	-				+1.1
5,883,262	-				-0.6
5,883,262	-				-2.6
5,883,262	-				-1.9
5,883,307	+				-2.6
5,883,307	+				-0.9
5,883,307	+				+1.3
5,883,307	+				-0.1
5,883,308	-				+3.1
5,883,308	-				-1.3
5,883,457	+		PFLU_RS26305	0.16	-1.1
5,883,649	+		PFLU_RS26305	0.34	-0.6
5,883,649	+		PFLU_RS26305	0.34	-0.8
5,883,650	-		PFLU_RS26305	0.34	-2.4
5,883,650	-		PFLU_RS26305	0.34	-0.1
5,883,650	-		PFLU_RS26305	0.34	-0.6
5,883,650	-		PFLU_RS26305	0.34	+1.9
5,883,650	-		PFLU_RS26305	0.34	+0.5
5,883,690	+		PFLU_RS26305	0.37	-0.9
5,883,691	-		PFLU_RS26305	0.38	-0.8
5,883,763	+		PFLU_RS26305	0.44	+0.6
5,883,763	+		PFLU_RS26305	0.44	+1.0
5,883,763	+		PFLU_RS26305	0.44	+0.7
5,883,763	+		PFLU_RS26305	0.44	-2.6
5,883,763	+		PFLU_RS26305	0.44	-2.0
5,883,763	+		PFLU_RS26305	0.44	+0.3
5,883,763	+		PFLU_RS26305	0.44	+0.4
5,883,763	+		PFLU_RS26305	0.44	+0.6
5,883,763	+		PFLU_RS26305	0.44	-0.5
5,883,763	+		PFLU_RS26305	0.44	-0.3
5,883,763	+		PFLU_RS26305	0.44	+1.7
5,883,763	+		PFLU_RS26305	0.44	+0.0
5,883,763	+		PFLU_RS26305	0.44	+0.4
5,883,763	+		PFLU_RS26305	0.44	+1.2
5,883,763	+		PFLU_RS26305	0.44	+1.9
5,883,763	+		PFLU_RS26305	0.44	+3.8
5,883,763	+		PFLU_RS26305	0.44	-2.4
5,883,763	+		PFLU_RS26305	0.44	-0.4
5,883,763	+		PFLU_RS26305	0.44	+1.3
5,883,763	+		PFLU_RS26305	0.44	-0.7
5,883,764	-		PFLU_RS26305	0.44	+1.5
5,883,764	-		PFLU_RS26305	0.44	+1.1
5,883,764	-		PFLU_RS26305	0.44	+1.0
5,883,764	-		PFLU_RS26305	0.44	+0.7
5,883,764	-		PFLU_RS26305	0.44	+0.6
5,883,764	-		PFLU_RS26305	0.44	+1.1
5,883,764	-		PFLU_RS26305	0.44	-2.4
5,883,764	-		PFLU_RS26305	0.44	-0.9
5,883,764	-		PFLU_RS26305	0.44	-0.4
5,883,764	-		PFLU_RS26305	0.44	-0.9
5,883,764	-		PFLU_RS26305	0.44	+1.5
5,883,764	-		PFLU_RS26305	0.44	-0.7
5,883,764	-		PFLU_RS26305	0.44	+2.1
5,883,764	-		PFLU_RS26305	0.44	+0.2
5,883,764	-		PFLU_RS26305	0.44	-0.4
5,883,764	-		PFLU_RS26305	0.44	+0.8
5,883,764	-		PFLU_RS26305	0.44	+2.5
5,883,806	-		PFLU_RS26305	0.48	-1.0
5,883,874	+		PFLU_RS26305	0.54	+0.1
5,883,874	+		PFLU_RS26305	0.54	+0.9
5,883,875	-		PFLU_RS26305	0.55	-0.9
5,883,875	-		PFLU_RS26305	0.55	-3.6
5,883,916	+		PFLU_RS26305	0.58	+0.7
5,883,916	+		PFLU_RS26305	0.58	-1.1
5,883,916	+		PFLU_RS26305	0.58	+0.1
5,883,916	+		PFLU_RS26305	0.58	+1.0
5,883,917	-		PFLU_RS26305	0.58	+0.3
5,883,917	-		PFLU_RS26305	0.58	-1.7
5,883,917	-		PFLU_RS26305	0.58	+1.3
5,883,917	-		PFLU_RS26305	0.58	+1.3
5,883,917	-		PFLU_RS26305	0.58	-1.6
5,883,917	-		PFLU_RS26305	0.58	-0.1
5,883,917	-		PFLU_RS26305	0.58	+0.3
5,883,917	-		PFLU_RS26305	0.58	-0.6
5,883,917	-		PFLU_RS26305	0.58	+0.4
5,883,959	+		PFLU_RS26305	0.62	+2.6
5,883,959	+		PFLU_RS26305	0.62	-0.4
5,883,959	+		PFLU_RS26305	0.62	-0.7
5,883,959	+		PFLU_RS26305	0.62	+1.5
5,883,959	+		PFLU_RS26305	0.62	+1.7
5,883,960	-		PFLU_RS26305	0.62	-1.6
5,883,960	-		PFLU_RS26305	0.62	+1.0
5,883,960	-		PFLU_RS26305	0.62	+0.5
5,883,960	-		PFLU_RS26305	0.62	-0.6
5,883,960	-		PFLU_RS26305	0.62	+0.3
5,883,960	-		PFLU_RS26305	0.62	-1.1
5,883,960	-		PFLU_RS26305	0.62	-2.1
5,883,960	-		PFLU_RS26305	0.62	-2.0
5,883,960	-		PFLU_RS26305	0.62	+0.6
5,883,960	-		PFLU_RS26305	0.62	-0.6
5,884,135	+		PFLU_RS26305	0.79	-1.9
5,884,135	+		PFLU_RS26305	0.79	-0.1
5,884,135	+		PFLU_RS26305	0.79	+2.5
5,884,135	+		PFLU_RS26305	0.79	+0.0
5,884,136	-		PFLU_RS26305	0.79	+0.5
5,884,136	-		PFLU_RS26305	0.79	-1.8
5,884,136	-		PFLU_RS26305	0.79	-2.6
5,884,136	-		PFLU_RS26305	0.79	-1.1
5,884,225	+		PFLU_RS26305	0.87	-0.9
5,884,225	+		PFLU_RS26305	0.87	+2.3
5,884,225	+		PFLU_RS26305	0.87	-0.4
5,884,225	+		PFLU_RS26305	0.87	+0.3
5,884,225	+		PFLU_RS26305	0.87	+0.1
5,884,226	-		PFLU_RS26305	0.87	+1.9
5,884,226	-		PFLU_RS26305	0.87	-1.4
5,884,226	-		PFLU_RS26305	0.87	+0.8