Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS22510

Experiment: acetate 30 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate 30 mM (C)
5,064,645	+		PFLU_RS22505	0.70	-1.7
5,064,645	+		PFLU_RS22505	0.70	-1.3
5,064,645	+		PFLU_RS22505	0.70	+1.3
5,064,645	+		PFLU_RS22505	0.70	-2.1
5,064,738	+		PFLU_RS22505	0.74	-1.0
5,064,739	-		PFLU_RS22505	0.74	+0.6
5,064,739	-		PFLU_RS22505	0.74	+0.2
5,064,739	-		PFLU_RS22505	0.74	-0.1
5,064,774	+		PFLU_RS22505	0.76	-1.7
5,064,774	+		PFLU_RS22505	0.76	-1.1
5,064,774	+		PFLU_RS22505	0.76	-0.2
5,064,774	+		PFLU_RS22505	0.76	+0.4
5,064,774	+		PFLU_RS22505	0.76	-1.7
5,064,774	+		PFLU_RS22505	0.76	+0.0
5,064,775	-		PFLU_RS22505	0.76	-1.2
5,064,775	-		PFLU_RS22505	0.76	-0.4
5,064,775	-		PFLU_RS22505	0.76	+0.2
5,064,775	-		PFLU_RS22505	0.76	-0.1
5,064,775	-		PFLU_RS22505	0.76	-1.2
5,064,795	+		PFLU_RS22505	0.77	+0.6
5,064,795	+		PFLU_RS22505	0.77	+1.6
5,064,795	+		PFLU_RS22505	0.77	+1.0
5,064,795	+		PFLU_RS22505	0.77	-1.6
5,064,796	-		PFLU_RS22505	0.77	-1.2
5,064,828	+		PFLU_RS22505	0.78	-1.1
5,064,828	+		PFLU_RS22505	0.78	-0.7
5,064,828	+		PFLU_RS22505	0.78	-0.1
5,064,828	+		PFLU_RS22505	0.78	+0.7
5,064,828	+		PFLU_RS22505	0.78	-0.1
5,064,828	+		PFLU_RS22505	0.78	-1.3
5,064,828	+		PFLU_RS22505	0.78	-1.2
5,064,828	+		PFLU_RS22505	0.78	-1.0
5,064,828	+		PFLU_RS22505	0.78	+0.4
5,064,828	+		PFLU_RS22505	0.78	-1.4
5,064,828	+		PFLU_RS22505	0.78	-2.2
5,064,828	+		PFLU_RS22505	0.78	-2.7
5,064,828	+		PFLU_RS22505	0.78	+2.0
5,064,829	-		PFLU_RS22505	0.78	+1.1
5,064,829	-		PFLU_RS22505	0.78	+0.3
5,064,829	-		PFLU_RS22505	0.78	+0.0
5,064,829	-		PFLU_RS22505	0.78	-0.7
5,064,829	-		PFLU_RS22505	0.78	+0.0
5,064,829	-		PFLU_RS22505	0.78	-2.8
5,064,829	-		PFLU_RS22505	0.78	-0.4
5,064,829	-		PFLU_RS22505	0.78	+1.1
5,064,829	-		PFLU_RS22505	0.78	+0.0
5,064,829	-		PFLU_RS22505	0.78	-0.3
5,064,829	-		PFLU_RS22505	0.78	-2.6
5,064,829	-		PFLU_RS22505	0.78	+0.3
5,064,831	+		PFLU_RS22505	0.78	-1.3
5,064,831	+		PFLU_RS22505	0.78	+0.0
5,064,831	+		PFLU_RS22505	0.78	+3.0
5,064,831	+		PFLU_RS22505	0.78	-0.3
5,064,831	+		PFLU_RS22505	0.78	-1.9
5,064,831	+		PFLU_RS22505	0.78	-0.1
5,064,831	+		PFLU_RS22505	0.78	+3.6
5,064,831	+		PFLU_RS22505	0.78	+2.8
5,064,831	+		PFLU_RS22505	0.78	-1.4
5,064,831	+		PFLU_RS22505	0.78	+0.0
5,064,831	+		PFLU_RS22505	0.78	-1.7
5,064,832	-		PFLU_RS22505	0.78	-2.3
5,064,832	-		PFLU_RS22505	0.78	-2.2
5,064,832	-		PFLU_RS22505	0.78	-0.4
5,064,834	+		PFLU_RS22505	0.78	-2.2
5,064,834	+		PFLU_RS22505	0.78	+1.0
5,064,835	-		PFLU_RS22505	0.78	-1.6
5,064,835	-		PFLU_RS22505	0.78	-2.3
5,064,888	+		PFLU_RS22505	0.81	-0.4
5,064,888	+		PFLU_RS22505	0.81	-1.6
5,064,888	+		PFLU_RS22505	0.81	-2.4
5,064,889	-		PFLU_RS22505	0.81	+0.6
5,064,889	-		PFLU_RS22505	0.81	-0.4
5,064,889	-		PFLU_RS22505	0.81	+0.9
5,064,889	-		PFLU_RS22505	0.81	-0.5
5,065,056	+		PFLU_RS22505	0.88	-1.2
5,065,056	+		PFLU_RS22505	0.88	+0.3
5,065,056	+		PFLU_RS22505	0.88	-1.6
5,065,056	+		PFLU_RS22505	0.88	+0.6
5,065,056	+		PFLU_RS22505	0.88	-2.2
5,065,056	+		PFLU_RS22505	0.88	-0.9
5,065,056	+		PFLU_RS22505	0.88	-1.6
5,065,057	-		PFLU_RS22505	0.88	+0.0
5,065,057	-		PFLU_RS22505	0.88	+0.4
5,065,057	-		PFLU_RS22505	0.88	+1.6
5,065,057	-		PFLU_RS22505	0.88	+1.5
5,065,057	-		PFLU_RS22505	0.88	-1.1
5,065,353	+				-0.6
5,065,353	+				-0.7
5,065,354	-				+2.8
5,065,402	+				-2.3
5,065,403	-				-2.2
5,065,414	+				-1.0
5,065,414	+				+1.4
5,065,414	+				+0.8
5,065,414	+				+2.5
5,065,414	+				+3.2
5,065,414	+				+0.6
5,065,414	+				+2.0
5,065,414	+				+1.6
5,065,415	-				-0.4
5,065,415	-				+0.7
5,065,415	-				+0.4
5,065,415	-				+1.1
5,065,415	-				+0.8
5,065,415	-				+3.2
5,065,415	-				+1.1
5,065,473	+				-1.5
5,065,473	+				+1.6
5,065,473	+				-1.0
5,065,474	-				-0.9
5,065,585	+		PFLU_RS22510	0.12	-2.3
5,065,585	+		PFLU_RS22510	0.12	-0.9
5,065,585	+		PFLU_RS22510	0.12	+1.6
5,065,585	+		PFLU_RS22510	0.12	-1.7
5,065,585	+		PFLU_RS22510	0.12	+1.6
5,065,585	+		PFLU_RS22510	0.12	-2.2
5,065,585	+		PFLU_RS22510	0.12	-3.2
5,065,585	+		PFLU_RS22510	0.12	+0.7
5,065,586	-		PFLU_RS22510	0.13	+0.2
5,065,586	-		PFLU_RS22510	0.13	+2.6
5,065,586	-		PFLU_RS22510	0.13	-0.3
5,065,586	-		PFLU_RS22510	0.13	-1.6
5,065,586	-		PFLU_RS22510	0.13	+0.4
5,065,586	-		PFLU_RS22510	0.13	+1.3
5,065,586	-		PFLU_RS22510	0.13	-2.2
5,065,586	-		PFLU_RS22510	0.13	+3.3
5,065,586	-		PFLU_RS22510	0.13	-1.0
5,065,586	-		PFLU_RS22510	0.13	-2.9
5,065,643	+		PFLU_RS22510	0.19	+1.0
5,065,643	+		PFLU_RS22510	0.19	-0.7
5,065,643	+		PFLU_RS22510	0.19	-0.9
5,065,643	+		PFLU_RS22510	0.19	-0.4
5,065,643	+		PFLU_RS22510	0.19	+2.3
5,065,643	+		PFLU_RS22510	0.19	+1.7
5,065,644	-		PFLU_RS22510	0.19	+1.3
5,065,644	-		PFLU_RS22510	0.19	+0.0
5,065,644	-		PFLU_RS22510	0.19	+0.6
5,065,644	-		PFLU_RS22510	0.19	-0.4
5,065,644	-		PFLU_RS22510	0.19	-1.9
5,065,644	-		PFLU_RS22510	0.19	-2.0
5,065,903	+		PFLU_RS22510	0.50	+2.0
5,065,903	+		PFLU_RS22510	0.50	-0.7
5,065,903	+		PFLU_RS22510	0.50	-2.9
5,065,903	+		PFLU_RS22510	0.50	-0.4
5,065,904	-		PFLU_RS22510	0.50	+0.0
5,065,904	-		PFLU_RS22510	0.50	-1.6
5,065,904	-		PFLU_RS22510	0.50	-2.4
5,065,904	-		PFLU_RS22510	0.50	+1.0
5,065,921	+		PFLU_RS22510	0.52	+0.7
5,065,922	-		PFLU_RS22510	0.52	-0.6
5,065,976	+		PFLU_RS22510	0.58	-2.0
5,065,976	+		PFLU_RS22510	0.58	-1.0
5,065,976	+		PFLU_RS22510	0.58	-1.0
5,065,976	+		PFLU_RS22510	0.58	-0.5
5,065,977	-		PFLU_RS22510	0.58	-1.7
5,065,977	-		PFLU_RS22510	0.58	-2.1
5,065,977	-		PFLU_RS22510	0.58	-1.6
5,065,977	-		PFLU_RS22510	0.58	-1.3
5,065,977	-		PFLU_RS22510	0.58	-1.9
5,065,977	-		PFLU_RS22510	0.58	+0.5
5,065,977	-		PFLU_RS22510	0.58	-2.3
5,065,977	-		PFLU_RS22510	0.58	-1.4
5,065,977	-		PFLU_RS22510	0.58	-1.6
5,066,054	+		PFLU_RS22510	0.67	-0.7
5,066,054	+		PFLU_RS22510	0.67	+0.9
5,066,054	+		PFLU_RS22510	0.67	-0.4
5,066,054	+		PFLU_RS22510	0.67	-2.4
5,066,055	-		PFLU_RS22510	0.67	-2.6
5,066,055	-		PFLU_RS22510	0.67	-0.7
5,066,231	+		PFLU_RS22510	0.88	-1.8
5,066,231	+		PFLU_RS22510	0.88	-1.0
5,066,231	+		PFLU_RS22510	0.88	-2.9
5,066,231	+		PFLU_RS22510	0.88	+0.0
5,066,231	+		PFLU_RS22510	0.88	-2.7
5,066,231	+		PFLU_RS22510	0.88	-0.6
5,066,231	+		PFLU_RS22510	0.88	-1.0
5,066,231	+		PFLU_RS22510	0.88	-1.4
5,066,231	+		PFLU_RS22510	0.88	-1.6
5,066,231	+		PFLU_RS22510	0.88	-0.9
5,066,231	+		PFLU_RS22510	0.88	-2.6
5,066,231	+		PFLU_RS22510	0.88	-2.2
5,066,231	+		PFLU_RS22510	0.88	-2.8
5,066,231	+		PFLU_RS22510	0.88	-0.2
5,066,232	-		PFLU_RS22510	0.88	+0.5
5,066,232	-		PFLU_RS22510	0.88	-2.5
5,066,232	-		PFLU_RS22510	0.88	+1.3
5,066,232	-		PFLU_RS22510	0.88	+0.6
5,066,232	-		PFLU_RS22510	0.88	+1.0
5,066,232	-		PFLU_RS22510	0.88	+1.6
5,066,232	-		PFLU_RS22510	0.88	-2.0
5,066,232	-		PFLU_RS22510	0.88	+1.6
5,066,232	-		PFLU_RS22510	0.88	-0.8
5,066,232	-		PFLU_RS22510	0.88	+0.6
5,066,232	-		PFLU_RS22510	0.88	-0.2
5,066,233	+		PFLU_RS22510	0.88	+0.1
5,066,234	-		PFLU_RS22510	0.88	+0.8
5,066,234	-		PFLU_RS22510	0.88	+0.1
5,066,234	-		PFLU_RS22510	0.88	-1.5
5,066,424	+				+0.4
5,066,424	+				-0.7
5,066,424	+				-2.2
5,066,424	+				-1.4
5,066,424	+				-1.3
5,066,424	+				-0.7
5,066,425	-				-0.1
5,066,425	-				-2.2
5,066,425	-				+0.7
5,066,425	-				+0.2
5,066,425	-				-1.4
5,066,525	+		PFLU_RS22515	0.14	-2.1
5,066,525	+		PFLU_RS22515	0.14	+1.1
5,066,610	+		PFLU_RS22515	0.20	-1.6
5,066,610	+		PFLU_RS22515	0.20	-0.6
5,066,611	-		PFLU_RS22515	0.21	-0.6
5,066,643	+		PFLU_RS22515	0.23	-0.7
5,066,643	+		PFLU_RS22515	0.23	+0.4
5,066,643	+		PFLU_RS22515	0.23	+0.0
5,066,643	+		PFLU_RS22515	0.23	-2.3
5,066,643	+		PFLU_RS22515	0.23	+0.0
5,066,643	+		PFLU_RS22515	0.23	-0.7
5,066,643	+		PFLU_RS22515	0.23	-0.1
5,066,643	+		PFLU_RS22515	0.23	-0.7
5,066,643	+		PFLU_RS22515	0.23	-0.8
5,066,644	-		PFLU_RS22515	0.23	+1.6
5,066,644	-		PFLU_RS22515	0.23	-1.0
5,066,644	-		PFLU_RS22515	0.23	-2.2
5,066,644	-		PFLU_RS22515	0.23	-2.4
5,066,644	-		PFLU_RS22515	0.23	+1.6
5,066,644	-		PFLU_RS22515	0.23	-1.2
5,066,644	-		PFLU_RS22515	0.23	-0.6
5,066,644	-		PFLU_RS22515	0.23	-2.2
5,066,644	-		PFLU_RS22515	0.23	+0.8
5,066,644	-		PFLU_RS22515	0.23	-0.9
5,066,644	-		PFLU_RS22515	0.23	+0.6
5,066,644	-		PFLU_RS22515	0.23	+1.9
5,066,644	-		PFLU_RS22515	0.23	+1.0
5,066,644	-		PFLU_RS22515	0.23	-0.7
5,066,644	-		PFLU_RS22515	0.23	-2.0
5,066,644	-		PFLU_RS22515	0.23	+1.6
5,066,644	-		PFLU_RS22515	0.23	+1.6
5,066,644	-		PFLU_RS22515	0.23	+1.4
5,066,644	-		PFLU_RS22515	0.23	-1.2
5,066,749	+		PFLU_RS22515	0.31	+1.2
5,066,750	-		PFLU_RS22515	0.31	-1.0
5,066,750	-		PFLU_RS22515	0.31	+0.4
5,066,750	-		PFLU_RS22515	0.31	-0.8
5,066,859	+		PFLU_RS22515	0.40	+0.0
5,066,859	+		PFLU_RS22515	0.40	+2.8
5,066,859	+		PFLU_RS22515	0.40	-0.7
5,066,860	-		PFLU_RS22515	0.40	-0.6
5,066,860	-		PFLU_RS22515	0.40	+0.9
5,066,860	-		PFLU_RS22515	0.40	-1.0
5,066,860	-		PFLU_RS22515	0.40	-0.7
5,066,860	-		PFLU_RS22515	0.40	+0.8
5,066,937	+		PFLU_RS22515	0.46	-1.6
5,066,937	+		PFLU_RS22515	0.46	+1.1
5,066,937	+		PFLU_RS22515	0.46	-3.1
5,066,937	+		PFLU_RS22515	0.46	+0.0
5,066,937	+		PFLU_RS22515	0.46	-0.4
5,066,938	-		PFLU_RS22515	0.46	-0.2
5,066,938	-		PFLU_RS22515	0.46	+2.0
5,066,938	-		PFLU_RS22515	0.46	-0.2
5,066,938	-		PFLU_RS22515	0.46	+1.0
5,066,938	-		PFLU_RS22515	0.46	-0.5
5,066,938	-		PFLU_RS22515	0.46	-1.6
5,066,938	-		PFLU_RS22515	0.46	-1.4
5,066,938	-		PFLU_RS22515	0.46	-0.7
5,066,938	-		PFLU_RS22515	0.46	-1.2
5,066,938	-		PFLU_RS22515	0.46	+1.6
5,066,938	-		PFLU_RS22515	0.46	+0.0
5,066,940	+		PFLU_RS22515	0.46	-0.3
5,066,940	+		PFLU_RS22515	0.46	-1.3
5,066,940	+		PFLU_RS22515	0.46	-0.4
5,066,941	-		PFLU_RS22515	0.46	+0.6
5,066,941	-		PFLU_RS22515	0.46	-0.3
5,066,941	-		PFLU_RS22515	0.46	+1.0
5,067,027	+		PFLU_RS22515	0.52	+0.6
5,067,027	+		PFLU_RS22515	0.52	-1.5
5,067,027	+		PFLU_RS22515	0.52	+1.9
5,067,027	+		PFLU_RS22515	0.52	-1.4
5,067,027	+		PFLU_RS22515	0.52	-1.6
5,067,027	+		PFLU_RS22515	0.52	+1.3
5,067,027	+		PFLU_RS22515	0.52	+1.5
5,067,027	+		PFLU_RS22515	0.52	+0.1
5,067,027	+		PFLU_RS22515	0.52	-1.9
5,067,027	+		PFLU_RS22515	0.52	-1.0
5,067,027	+		PFLU_RS22515	0.52	-1.5
5,067,027	+		PFLU_RS22515	0.52	-1.7
5,067,028	-		PFLU_RS22515	0.52	-1.4
5,067,028	-		PFLU_RS22515	0.52	+0.1
5,067,028	-		PFLU_RS22515	0.52	-0.3
5,067,028	-		PFLU_RS22515	0.52	-1.2
5,067,028	-		PFLU_RS22515	0.52	-0.3
5,067,028	-		PFLU_RS22515	0.52	+0.5
5,067,028	-		PFLU_RS22515	0.52	-1.2
5,067,028	-		PFLU_RS22515	0.52	-0.7
5,067,028	-		PFLU_RS22515	0.52	-0.7
5,067,028	-		PFLU_RS22515	0.52	+0.3
5,067,028	-		PFLU_RS22515	0.52	-2.2
5,067,028	-		PFLU_RS22515	0.52	-0.9
5,067,028	-		PFLU_RS22515	0.52	+1.6
5,067,028	-		PFLU_RS22515	0.52	-0.4
5,067,028	-		PFLU_RS22515	0.52	-0.4
5,067,028	-		PFLU_RS22515	0.52	-2.2
5,067,028	-		PFLU_RS22515	0.52	-0.4
5,067,114	+		PFLU_RS22515	0.59	-2.1
5,067,114	+		PFLU_RS22515	0.59	+2.4
5,067,114	+		PFLU_RS22515	0.59	-0.9
5,067,114	+		PFLU_RS22515	0.59	+2.9
5,067,114	+		PFLU_RS22515	0.59	+2.9
5,067,114	+		PFLU_RS22515	0.59	-1.5
5,067,115	-		PFLU_RS22515	0.59	-1.0
5,067,115	-		PFLU_RS22515	0.59	+0.0
5,067,115	-		PFLU_RS22515	0.59	-1.9
5,067,115	-		PFLU_RS22515	0.59	-1.2
5,067,123	+		PFLU_RS22515	0.60	+0.0
5,067,123	+		PFLU_RS22515	0.60	+1.8