Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS04815

Experiment: acetate 30 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate 30 mM (C)
1,076,048	+		PFLU_RS04810	0.16	-2.0
1,076,048	+		PFLU_RS04810	0.16	-0.5
1,076,048	+		PFLU_RS04810	0.16	+0.5
1,076,048	+		PFLU_RS04810	0.16	-3.1
1,076,048	+		PFLU_RS04810	0.16	-3.1
1,076,072	+		PFLU_RS04810	0.19	+1.2
1,076,072	+		PFLU_RS04810	0.19	-1.8
1,076,072	+		PFLU_RS04810	0.19	-1.5
1,076,072	+		PFLU_RS04810	0.19	-3.5
1,076,072	+		PFLU_RS04810	0.19	-1.7
1,076,072	+		PFLU_RS04810	0.19	-1.4
1,076,072	+		PFLU_RS04810	0.19	+0.2
1,076,073	-		PFLU_RS04810	0.19	+1.4
1,076,073	-		PFLU_RS04810	0.19	-2.1
1,076,089	+		PFLU_RS04810	0.20	-0.4
1,076,127	-		PFLU_RS04810	0.24	-2.5
1,076,127	-		PFLU_RS04810	0.24	-0.8
1,076,127	-		PFLU_RS04810	0.24	-2.8
1,076,127	-		PFLU_RS04810	0.24	-2.1
1,076,345	+		PFLU_RS04810	0.47	-2.5
1,076,345	+		PFLU_RS04810	0.47	-2.0
1,076,345	+		PFLU_RS04810	0.47	-1.6
1,076,345	+		PFLU_RS04810	0.47	-2.9
1,076,346	-		PFLU_RS04810	0.47	-3.1
1,076,346	-		PFLU_RS04810	0.47	-0.5
1,076,346	-		PFLU_RS04810	0.47	-0.8
1,076,346	-		PFLU_RS04810	0.47	-1.5
1,076,346	-		PFLU_RS04810	0.47	-1.2
1,076,346	-		PFLU_RS04810	0.47	-1.1
1,076,372	+		PFLU_RS04810	0.50	-0.5
1,076,372	+		PFLU_RS04810	0.50	-3.3
1,076,372	+		PFLU_RS04810	0.50	-2.7
1,076,372	+		PFLU_RS04810	0.50	-3.8
1,076,372	+		PFLU_RS04810	0.50	-2.7
1,076,372	+		PFLU_RS04810	0.50	-1.8
1,076,372	+		PFLU_RS04810	0.50	-2.0
1,076,372	+		PFLU_RS04810	0.50	-2.3
1,076,373	-		PFLU_RS04810	0.50	-1.3
1,076,373	-		PFLU_RS04810	0.50	-2.6
1,076,373	-		PFLU_RS04810	0.50	-0.8
1,076,373	-		PFLU_RS04810	0.50	-1.1
1,076,373	-		PFLU_RS04810	0.50	-1.5
1,076,373	-		PFLU_RS04810	0.50	-2.8
1,076,373	-		PFLU_RS04810	0.50	-2.3
1,076,444	+		PFLU_RS04810	0.57	-2.3
1,076,636	+		PFLU_RS04810	0.77	-2.2
1,076,637	-		PFLU_RS04810	0.77	+0.2
1,076,666	+		PFLU_RS04810	0.80	-2.7
1,076,666	+		PFLU_RS04810	0.80	-0.8
1,076,666	+		PFLU_RS04810	0.80	-2.2
1,076,667	-		PFLU_RS04810	0.80	-2.6
1,076,667	-		PFLU_RS04810	0.80	-2.5
1,076,667	-		PFLU_RS04810	0.80	-1.7
1,076,667	-		PFLU_RS04810	0.80	+0.8
1,076,778	+				+0.4
1,076,879	+				+1.5
1,076,919	+				+3.1
1,076,919	+				+2.6
1,076,919	+				+1.8
1,076,920	-				+0.2
1,076,920	-				+1.7
1,076,930	+				+1.6
1,076,945	-				+0.8
1,076,971	+				-1.0
1,076,971	+				+0.8
1,076,971	+				-2.6
1,076,994	-				-2.0
1,077,091	+				-3.0
1,077,237	+		PFLU_RS04815	0.13	-3.1
1,077,237	+		PFLU_RS04815	0.13	-1.5
1,077,237	+		PFLU_RS04815	0.13	-2.7
1,077,238	-		PFLU_RS04815	0.13	-0.8
1,077,238	-		PFLU_RS04815	0.13	-2.3
1,077,238	-		PFLU_RS04815	0.13	-2.7
1,077,420	+		PFLU_RS04815	0.25	-3.5
1,077,420	+		PFLU_RS04815	0.25	-1.9
1,077,420	+		PFLU_RS04815	0.25	-2.3
1,077,420	+		PFLU_RS04815	0.25	-2.0
1,077,420	+		PFLU_RS04815	0.25	-1.9
1,077,420	+		PFLU_RS04815	0.25	-2.7
1,077,421	-		PFLU_RS04815	0.25	-2.5
1,077,421	-		PFLU_RS04815	0.25	-2.9
1,077,421	-		PFLU_RS04815	0.25	-1.4
1,077,421	-		PFLU_RS04815	0.25	-3.2
1,077,421	-		PFLU_RS04815	0.25	-1.7
1,077,483	+		PFLU_RS04815	0.29	-1.0
1,077,483	+		PFLU_RS04815	0.29	-1.4
1,077,483	+		PFLU_RS04815	0.29	-3.6
1,077,483	+		PFLU_RS04815	0.29	-1.3
1,077,483	+		PFLU_RS04815	0.29	-2.7
1,077,483	+		PFLU_RS04815	0.29	-1.4
1,077,483	+		PFLU_RS04815	0.29	-2.7
1,077,483	+		PFLU_RS04815	0.29	-1.5
1,077,484	-		PFLU_RS04815	0.29	-0.5
1,077,484	-		PFLU_RS04815	0.29	-1.9
1,077,484	-		PFLU_RS04815	0.29	-3.1
1,077,484	-		PFLU_RS04815	0.29	-0.2
1,077,484	-		PFLU_RS04815	0.29	-3.1
1,077,484	-		PFLU_RS04815	0.29	-1.9
1,077,484	-		PFLU_RS04815	0.29	-2.0
1,077,484	-		PFLU_RS04815	0.29	-2.0
1,077,484	-		PFLU_RS04815	0.29	-1.6
1,077,484	-		PFLU_RS04815	0.29	-1.8
1,077,484	-		PFLU_RS04815	0.29	-0.2
1,077,606	+		PFLU_RS04815	0.37	-1.8
1,077,606	+		PFLU_RS04815	0.37	-0.2
1,077,606	+		PFLU_RS04815	0.37	-1.9
1,077,606	+		PFLU_RS04815	0.37	-1.5
1,077,606	+		PFLU_RS04815	0.37	-1.2
1,077,606	+		PFLU_RS04815	0.37	-0.2
1,077,606	+		PFLU_RS04815	0.37	-1.8
1,077,606	+		PFLU_RS04815	0.37	-1.9
1,077,606	+		PFLU_RS04815	0.37	-1.4
1,077,607	-		PFLU_RS04815	0.37	-2.2
1,077,607	-		PFLU_RS04815	0.37	-0.3
1,077,628	-		PFLU_RS04815	0.39	-1.5
1,077,628	-		PFLU_RS04815	0.39	-2.5
1,077,693	-		PFLU_RS04815	0.43	-2.9
1,077,866	+		PFLU_RS04815	0.54	-0.2
1,077,866	+		PFLU_RS04815	0.54	-2.9
1,077,866	+		PFLU_RS04815	0.54	-1.4
1,077,866	+		PFLU_RS04815	0.54	-2.2
1,077,867	-		PFLU_RS04815	0.55	-3.1
1,078,038	+		PFLU_RS04815	0.66	-1.9
1,078,038	+		PFLU_RS04815	0.66	-0.9
1,078,039	-		PFLU_RS04815	0.66	-1.9
1,078,039	-		PFLU_RS04815	0.66	-1.4
1,078,039	-		PFLU_RS04815	0.66	-1.0
1,078,039	-		PFLU_RS04815	0.66	-1.7
1,078,039	-		PFLU_RS04815	0.66	-1.2
1,078,039	-		PFLU_RS04815	0.66	-2.5
1,078,092	+		PFLU_RS04815	0.69	-1.8
1,078,092	+		PFLU_RS04815	0.69	-2.8
1,078,092	+		PFLU_RS04815	0.69	-1.9
1,078,092	+		PFLU_RS04815	0.69	-1.5
1,078,092	+		PFLU_RS04815	0.69	-0.5
1,078,092	+		PFLU_RS04815	0.69	-0.4
1,078,092	+		PFLU_RS04815	0.69	-1.0
1,078,092	+		PFLU_RS04815	0.69	-1.5
1,078,092	+		PFLU_RS04815	0.69	-2.9
1,078,092	+		PFLU_RS04815	0.69	-0.5
1,078,092	+		PFLU_RS04815	0.69	-2.8
1,078,092	+		PFLU_RS04815	0.69	-1.8
1,078,092	+		PFLU_RS04815	0.69	-1.1
1,078,092	+		PFLU_RS04815	0.69	-2.2
1,078,092	+		PFLU_RS04815	0.69	-2.7
1,078,092	+		PFLU_RS04815	0.69	+0.2
1,078,093	-		PFLU_RS04815	0.70	-1.0
1,078,093	-		PFLU_RS04815	0.70	-2.2
1,078,093	-		PFLU_RS04815	0.70	-2.2
1,078,093	-		PFLU_RS04815	0.70	-1.7
1,078,093	-		PFLU_RS04815	0.70	-2.8
1,078,093	-		PFLU_RS04815	0.70	-3.5
1,078,093	-		PFLU_RS04815	0.70	-2.5
1,078,093	-		PFLU_RS04815	0.70	-1.4
1,078,093	-		PFLU_RS04815	0.70	-1.7
1,078,093	-		PFLU_RS04815	0.70	-0.5
1,078,093	-		PFLU_RS04815	0.70	-2.2
1,078,094	+		PFLU_RS04815	0.70	-1.5
1,078,094	+		PFLU_RS04815	0.70	-2.4
1,078,094	+		PFLU_RS04815	0.70	-1.4
1,078,094	+		PFLU_RS04815	0.70	-0.2
1,078,094	+		PFLU_RS04815	0.70	-1.8
1,078,094	+		PFLU_RS04815	0.70	-1.7
1,078,094	+		PFLU_RS04815	0.70	-2.5
1,078,094	+		PFLU_RS04815	0.70	-1.7
1,078,094	+		PFLU_RS04815	0.70	-3.1
1,078,094	+		PFLU_RS04815	0.70	-0.4
1,078,094	+		PFLU_RS04815	0.70	-2.1
1,078,094	+		PFLU_RS04815	0.70	-1.3
1,078,094	+		PFLU_RS04815	0.70	-2.0
1,078,095	-		PFLU_RS04815	0.70	-0.8
1,078,095	-		PFLU_RS04815	0.70	-3.4
1,078,095	-		PFLU_RS04815	0.70	-3.6
1,078,095	-		PFLU_RS04815	0.70	-1.4
1,078,095	-		PFLU_RS04815	0.70	-1.0
1,078,095	-		PFLU_RS04815	0.70	-0.8
1,078,173	+		PFLU_RS04815	0.75	-1.7
1,078,311	+		PFLU_RS04815	0.84	-1.4
1,078,311	+		PFLU_RS04815	0.84	-1.2
1,078,311	+		PFLU_RS04815	0.84	-1.9
1,078,312	-		PFLU_RS04815	0.84	-2.1
1,078,312	-		PFLU_RS04815	0.84	-1.7
1,078,312	-		PFLU_RS04815	0.84	-2.7
1,078,353	+		PFLU_RS04815	0.87	-1.7
1,078,353	+		PFLU_RS04815	0.87	-1.2
1,078,414	+				-1.4
1,078,414	+				-1.8
1,078,414	+				-1.5
1,078,415	-				-1.4
1,078,415	-				-2.2
1,078,415	-				-1.2
1,078,415	-				-2.0
1,078,490	-				-2.1
1,078,555	+				-0.7
1,078,660	+				-1.2
1,078,660	+				+0.2
1,078,660	+				-0.5
1,078,660	+				-2.6
1,078,660	+				-1.8
1,078,660	+				-1.5
1,078,660	+				-1.7
1,078,660	+				-3.0
1,078,660	+				-3.1
1,078,660	+				-2.8
1,078,660	+				-3.4
1,078,660	+				-2.3
1,078,660	+				-2.7
1,078,660	+				-2.2
1,078,660	+				-0.2
1,078,660	+				-1.5
1,078,661	-				-2.5
1,078,661	-				-1.8
1,078,661	-				-3.4
1,078,661	-				-2.6
1,078,661	-				-3.2
1,078,661	-				-1.5
1,078,661	-				-1.0
1,078,661	-				-1.4
1,078,661	-				-2.5
1,078,661	-				-2.5
1,078,661	-				-2.9
1,078,662	+				-2.2
1,078,662	+				-3.9
1,078,662	+				-1.6
1,078,662	+				-2.0
1,078,662	+				-0.6
1,078,662	+				-1.9
1,078,662	+				-2.6
1,078,663	-				-2.3
1,078,663	-				-1.7
1,078,663	-				-1.5
1,078,663	-				-3.8
1,078,663	-				-1.0
1,078,663	-				-1.7
1,078,663	-				-0.4
1,078,663	-				-2.4
1,078,663	-				-0.5
1,078,663	-				-2.6
1,078,663	-				-1.7
1,078,668	+				-0.8
1,078,669	-				-1.0
1,078,755	+				-2.5
1,078,801	+		PFLU_RS04820	0.11	-1.2
1,078,801	+		PFLU_RS04820	0.11	-2.9
1,078,802	-		PFLU_RS04820	0.11	-1.9
1,078,802	-		PFLU_RS04820	0.11	-1.9
1,078,802	-		PFLU_RS04820	0.11	-0.8
1,078,802	-		PFLU_RS04820	0.11	-2.2
1,078,951	+		PFLU_RS04820	0.18	-1.7
1,078,951	+		PFLU_RS04820	0.18	+0.2
1,078,951	+		PFLU_RS04820	0.18	-3.3
1,078,973	-		PFLU_RS04820	0.19	-0.2
1,078,975	-		PFLU_RS04820	0.19	-2.3
1,079,025	+		PFLU_RS04820	0.21	-1.7
1,079,137	+		PFLU_RS04820	0.26	-0.2
1,079,137	+		PFLU_RS04820	0.26	-0.8
1,079,137	+		PFLU_RS04820	0.26	-2.0
1,079,137	+		PFLU_RS04820	0.26	-0.8
1,079,137	+		PFLU_RS04820	0.26	-2.5
1,079,137	+		PFLU_RS04820	0.26	+1.8
1,079,137	+		PFLU_RS04820	0.26	-1.8
1,079,137	+		PFLU_RS04820	0.26	-2.1
1,079,137	+		PFLU_RS04820	0.26	-1.7
1,079,137	+		PFLU_RS04820	0.26	-1.2
1,079,137	+		PFLU_RS04820	0.26	-2.3
1,079,137	+		PFLU_RS04820	0.26	-1.8
1,079,138	-		PFLU_RS04820	0.26	-2.7
1,079,138	-		PFLU_RS04820	0.26	-1.2
1,079,138	-		PFLU_RS04820	0.26	-1.0
1,079,138	-		PFLU_RS04820	0.26	-1.7
1,079,138	-		PFLU_RS04820	0.26	-1.7
1,079,138	-		PFLU_RS04820	0.26	-2.6
1,079,138	-		PFLU_RS04820	0.26	-2.3
1,079,138	-		PFLU_RS04820	0.26	-2.3
1,079,138	-		PFLU_RS04820	0.26	-1.0
1,079,138	-		PFLU_RS04820	0.26	-1.9
1,079,230	-		PFLU_RS04820	0.31	-1.5
1,079,289	+		PFLU_RS04820	0.33	-1.6
1,079,289	+		PFLU_RS04820	0.33	-1.7
1,079,289	+		PFLU_RS04820	0.33	-2.3
1,079,289	+		PFLU_RS04820	0.33	-2.6
1,079,290	-		PFLU_RS04820	0.33	-1.0
1,079,290	-		PFLU_RS04820	0.33	-2.7
1,079,290	-		PFLU_RS04820	0.33	-1.4
1,079,290	-		PFLU_RS04820	0.33	-3.2
1,079,521	+		PFLU_RS04820	0.44	-2.0
1,079,521	+		PFLU_RS04820	0.44	-1.1
1,079,521	+		PFLU_RS04820	0.44	-1.5
1,079,522	-		PFLU_RS04820	0.44	+0.8
1,079,522	-		PFLU_RS04820	0.44	-1.9
1,079,522	-		PFLU_RS04820	0.44	-1.4