Experiment: DAC15 _cps3_0.1MOI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0469 and BT0470 overlap by 1 nucleotides BT0470 and BT0471 are separated by 6 nucleotides
BT0469: BT0469 - hypothetical protein (NCBI ptt file), at 580,260 to 581,522
BT0469
BT0470: BT0470 - hypothetical protein (NCBI ptt file), at 581,522 to 582,751
BT0470
BT0471: BT0471 - glycosyltransferase (NCBI ptt file), at 582,758 to 583,972
BT0471
Position (kb) 581
582
583 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 580.524 kb on - strand, within BT0469 at 580.606 kb on - strand, within BT0469 at 580.639 kb on + strand, within BT0469 at 580.889 kb on - strand, within BT0469 at 580.988 kb on - strand, within BT0469 at 581.052 kb on - strand, within BT0469 at 581.089 kb on - strand, within BT0469 at 581.243 kb on - strand, within BT0469 at 581.258 kb on - strand, within BT0469 at 581.597 kb on + strand at 581.624 kb on - strand at 581.633 kb on - strand at 581.675 kb on - strand, within BT0470 at 581.797 kb on - strand, within BT0470 at 581.966 kb on - strand, within BT0470 at 582.071 kb on - strand, within BT0470 at 582.086 kb on - strand, within BT0470 at 582.100 kb on - strand, within BT0470 at 582.115 kb on - strand, within BT0470 at 582.115 kb on - strand, within BT0470 at 582.125 kb on - strand, within BT0470 at 582.125 kb on - strand, within BT0470 at 582.152 kb on - strand, within BT0470 at 582.257 kb on - strand, within BT0470 at 582.260 kb on - strand, within BT0470 at 582.260 kb on - strand, within BT0470 at 582.303 kb on - strand, within BT0470 at 582.307 kb on - strand, within BT0470 at 582.307 kb on - strand, within BT0470 at 582.391 kb on - strand, within BT0470 at 582.409 kb on - strand, within BT0470 at 582.426 kb on - strand, within BT0470 at 582.449 kb on - strand, within BT0470 at 582.498 kb on - strand, within BT0470 at 582.509 kb on - strand, within BT0470 at 582.667 kb on - strand at 582.667 kb on - strand at 582.835 kb on - strand at 583.013 kb on - strand, within BT0471 at 583.058 kb on - strand, within BT0471 at 583.147 kb on - strand, within BT0471 at 583.257 kb on + strand, within BT0471 at 583.303 kb on - strand, within BT0471 at 583.420 kb on - strand, within BT0471 at 583.424 kb on + strand, within BT0471 at 583.425 kb on - strand, within BT0471 at 583.425 kb on - strand, within BT0471 at 583.427 kb on - strand, within BT0471 at 583.669 kb on + strand, within BT0471 at 583.751 kb on - strand, within BT0471
Per-strain Table
Position Strand Gene LocusTag Fraction DAC15 _cps3_0.1MOI remove 580,524 - BT0469 0.21 +2.0 580,606 - BT0469 0.27 -1.7 580,639 + BT0469 0.30 -0.8 580,889 - BT0469 0.50 +0.7 580,988 - BT0469 0.58 +1.0 581,052 - BT0469 0.63 -0.2 581,089 - BT0469 0.66 -0.4 581,243 - BT0469 0.78 -1.2 581,258 - BT0469 0.79 -0.6 581,597 + +3.0 581,624 - +1.0 581,633 - -0.6 581,675 - BT0470 0.12 -0.0 581,797 - BT0470 0.22 -0.2 581,966 - BT0470 0.36 +1.8 582,071 - BT0470 0.45 +0.7 582,086 - BT0470 0.46 -1.5 582,100 - BT0470 0.47 -1.6 582,115 - BT0470 0.48 +2.0 582,115 - BT0470 0.48 +1.6 582,125 - BT0470 0.49 +0.7 582,125 - BT0470 0.49 +0.3 582,152 - BT0470 0.51 -0.0 582,257 - BT0470 0.60 +0.2 582,260 - BT0470 0.60 +0.8 582,260 - BT0470 0.60 +1.6 582,303 - BT0470 0.63 +0.1 582,307 - BT0470 0.64 -0.2 582,307 - BT0470 0.64 -1.3 582,391 - BT0470 0.71 -1.7 582,409 - BT0470 0.72 -0.3 582,426 - BT0470 0.73 +0.1 582,449 - BT0470 0.75 +1.0 582,498 - BT0470 0.79 -2.2 582,509 - BT0470 0.80 +0.6 582,667 - -0.0 582,667 - +0.6 582,835 - -0.0 583,013 - BT0471 0.21 +1.0 583,058 - BT0471 0.25 +1.6 583,147 - BT0471 0.32 -0.7 583,257 + BT0471 0.41 +0.5 583,303 - BT0471 0.45 +2.5 583,420 - BT0471 0.54 +0.1 583,424 + BT0471 0.55 -0.6 583,425 - BT0471 0.55 -3.0 583,425 - BT0471 0.55 -0.2 583,427 - BT0471 0.55 +1.0 583,669 + BT0471 0.75 -2.3 583,751 - BT0471 0.82 -1.6
Or see this region's nucleotide sequence