Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS10320

Experiment: sn-glycero-3-phosphocholine 10 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	sn-glycero-3-phosphocholine 10 mM (C)
2,274,645	+		PFLU_RS10315	0.35	-0.5
2,274,645	+		PFLU_RS10315	0.35	-1.2
2,274,645	+		PFLU_RS10315	0.35	-1.7
2,274,833	+		PFLU_RS10315	0.52	-1.1
2,274,833	+		PFLU_RS10315	0.52	-0.9
2,274,834	-		PFLU_RS10315	0.52	-1.3
2,274,834	-		PFLU_RS10315	0.52	-3.0
2,274,834	-		PFLU_RS10315	0.52	-1.9
2,274,834	-		PFLU_RS10315	0.52	-0.7
2,274,845	+		PFLU_RS10315	0.53	+1.9
2,274,845	+		PFLU_RS10315	0.53	-0.1
2,274,845	+		PFLU_RS10315	0.53	-0.2
2,274,845	+		PFLU_RS10315	0.53	-1.2
2,274,845	+		PFLU_RS10315	0.53	-0.0
2,274,845	+		PFLU_RS10315	0.53	-0.9
2,274,846	-		PFLU_RS10315	0.53	-1.5
2,274,846	-		PFLU_RS10315	0.53	-1.2
2,274,846	-		PFLU_RS10315	0.53	-1.0
2,274,846	-		PFLU_RS10315	0.53	-3.8
2,274,846	-		PFLU_RS10315	0.53	-0.5
2,274,846	-		PFLU_RS10315	0.53	-2.7
2,274,857	+		PFLU_RS10315	0.54	+0.9
2,274,857	+		PFLU_RS10315	0.54	+0.5
2,274,857	+		PFLU_RS10315	0.54	-0.3
2,274,858	-		PFLU_RS10315	0.54	-2.0
2,274,858	-		PFLU_RS10315	0.54	-2.9
2,274,858	-		PFLU_RS10315	0.54	-1.5
2,274,905	+		PFLU_RS10315	0.58	-0.9
2,274,905	+		PFLU_RS10315	0.58	-1.5
2,274,905	+		PFLU_RS10315	0.58	+0.8
2,274,905	+		PFLU_RS10315	0.58	-3.0
2,274,905	+		PFLU_RS10315	0.58	+0.1
2,274,905	+		PFLU_RS10315	0.58	-0.1
2,274,905	+		PFLU_RS10315	0.58	-0.7
2,274,906	-		PFLU_RS10315	0.58	-1.2
2,274,906	-		PFLU_RS10315	0.58	-4.1
2,274,906	-		PFLU_RS10315	0.58	-4.4
2,274,961	+		PFLU_RS10315	0.63	+2.1
2,275,244	+		PFLU_RS10315	0.88	+1.6
2,275,244	+		PFLU_RS10315	0.88	-1.4
2,275,244	+		PFLU_RS10315	0.88	+0.5
2,275,244	+		PFLU_RS10315	0.88	+1.8
2,275,244	+		PFLU_RS10315	0.88	+1.1
2,275,244	+		PFLU_RS10315	0.88	-0.6
2,275,244	+		PFLU_RS10315	0.88	-2.2
2,275,245	-		PFLU_RS10315	0.88	-0.5
2,275,245	-		PFLU_RS10315	0.88	-1.7
2,275,245	-		PFLU_RS10315	0.88	-3.1
2,275,245	-		PFLU_RS10315	0.88	-0.1
2,275,245	-		PFLU_RS10315	0.88	-0.0
2,275,286	+				-0.9
2,275,287	-				-0.5
2,275,332	-				+1.1
2,275,349	+				+0.5
2,275,349	+				-0.1
2,275,349	+				-3.0
2,275,350	-				-0.8
2,275,350	-				-3.5
2,275,350	-				+0.3
2,275,350	-				-2.3
2,275,376	+				-2.8
2,275,376	+				-0.5
2,275,376	+				+0.5
2,275,376	+				-0.9
2,275,377	-				-1.3
2,275,377	-				+0.1
2,275,377	-				-0.9
2,275,377	-				-3.2
2,275,377	-				-0.9
2,275,377	-				-0.2
2,275,377	-				+0.5
2,275,406	+				-0.5
2,275,407	-				-1.7
2,275,407	-				-3.5
2,275,407	-				-2.0
2,275,407	-				-2.9
2,275,428	+				+0.9
2,275,428	+				-1.7
2,275,428	+				-0.3
2,275,429	-				-1.7
2,275,429	-				-4.4
2,275,429	-				-3.7
2,275,429	-				-2.8
2,275,429	-				-2.7
2,275,637	+		PFLU_RS10320	0.33	-1.5
2,275,637	+		PFLU_RS10320	0.33	-0.2
2,275,637	+		PFLU_RS10320	0.33	-0.1
2,275,637	+		PFLU_RS10320	0.33	-1.9
2,275,638	-		PFLU_RS10320	0.33	-0.5
2,275,638	-		PFLU_RS10320	0.33	-0.9
2,275,911	+		PFLU_RS10320	0.68	-2.3
2,275,911	+		PFLU_RS10320	0.68	+1.3
2,275,911	+		PFLU_RS10320	0.68	-2.0
2,275,911	+		PFLU_RS10320	0.68	-1.5
2,275,911	+		PFLU_RS10320	0.68	-1.9
2,275,912	-		PFLU_RS10320	0.68	-1.6
2,275,912	-		PFLU_RS10320	0.68	-2.0
2,275,912	-		PFLU_RS10320	0.68	-3.1
2,275,912	-		PFLU_RS10320	0.68	-1.8
2,275,912	-		PFLU_RS10320	0.68	-0.9
2,275,912	-		PFLU_RS10320	0.68	-2.1
2,275,912	-		PFLU_RS10320	0.68	-2.8
2,275,912	-		PFLU_RS10320	0.68	-3.5
2,275,914	+		PFLU_RS10320	0.68	-0.6
2,275,914	+		PFLU_RS10320	0.68	-0.7
2,275,914	+		PFLU_RS10320	0.68	-1.4
2,275,914	+		PFLU_RS10320	0.68	-0.5
2,275,914	+		PFLU_RS10320	0.68	+0.4
2,275,914	+		PFLU_RS10320	0.68	-0.9
2,275,914	+		PFLU_RS10320	0.68	-0.5
2,275,915	-		PFLU_RS10320	0.69	-3.0
2,275,915	-		PFLU_RS10320	0.69	-0.7
2,275,915	-		PFLU_RS10320	0.69	-2.5
2,275,915	-		PFLU_RS10320	0.69	-1.9
2,275,915	-		PFLU_RS10320	0.69	-2.0
2,275,915	-		PFLU_RS10320	0.69	-3.2
2,275,915	-		PFLU_RS10320	0.69	+1.1
2,275,917	+		PFLU_RS10320	0.69	-1.7
2,275,918	-		PFLU_RS10320	0.69	-1.7
2,275,918	-		PFLU_RS10320	0.69	-1.5
2,275,918	-		PFLU_RS10320	0.69	-0.5
2,275,918	-		PFLU_RS10320	0.69	-0.8
2,275,918	-		PFLU_RS10320	0.69	-0.5
2,275,918	-		PFLU_RS10320	0.69	-0.5
2,275,980	+		PFLU_RS10320	0.77	-2.2
2,275,980	+		PFLU_RS10320	0.77	+0.8
2,275,980	+		PFLU_RS10320	0.77	-0.1
2,275,980	+		PFLU_RS10320	0.77	-3.7
2,275,980	+		PFLU_RS10320	0.77	-0.1
2,275,981	-		PFLU_RS10320	0.77	-2.7
2,275,981	-		PFLU_RS10320	0.77	-0.2
2,275,981	-		PFLU_RS10320	0.77	-2.0
2,275,981	-		PFLU_RS10320	0.77	-2.6
2,276,004	+		PFLU_RS10320	0.80	-0.9
2,276,004	+		PFLU_RS10320	0.80	+0.8
2,276,004	+		PFLU_RS10320	0.80	+0.8
2,276,005	-		PFLU_RS10320	0.80	-2.2
2,276,085	+				-0.9
2,276,085	+				-1.1
2,276,085	+				+0.1
2,276,085	+				+1.8
2,276,085	+				+0.7
2,276,086	-				-2.2
2,276,086	-				-2.2
2,276,106	+				+0.5
2,276,106	+				+0.0
2,276,106	+				-0.3
2,276,179	+				-2.2
2,276,179	+				-2.2
2,276,179	+				-1.2
2,276,179	+				-0.3
2,276,179	+				-0.1
2,276,179	+				-0.1
2,276,180	-				-2.5
2,276,180	-				-0.5
2,276,246	+				-3.3
2,276,246	+				-1.3
2,276,246	+				-0.7
2,276,246	+				-1.9
2,276,246	+				-0.5
2,276,246	+				-0.3
2,276,247	-				-2.3
2,276,247	-				-0.7
2,276,247	-				-3.3
2,276,247	-				-1.5
2,276,247	-				-3.3
2,276,247	-				-0.3
2,276,247	-				-1.9
2,276,250	+				-2.3
2,276,250	+				-2.6
2,276,250	+				-3.5
2,276,251	-				-0.9
2,276,251	-				-0.6
2,276,251	-				-1.2
2,276,251	-				-2.0
2,276,266	-				-1.9
2,276,316	+		PFLU_RS10325	0.12	-0.9
2,276,317	-		PFLU_RS10325	0.12	-1.2
2,276,317	-		PFLU_RS10325	0.12	-2.0
2,276,532	+		PFLU_RS10325	0.30	-2.3
2,276,532	+		PFLU_RS10325	0.30	-1.7
2,276,532	+		PFLU_RS10325	0.30	-0.4
2,276,532	+		PFLU_RS10325	0.30	+0.1
2,276,532	+		PFLU_RS10325	0.30	-1.9
2,276,532	+		PFLU_RS10325	0.30	-1.5
2,276,533	-		PFLU_RS10325	0.30	-0.5
2,276,533	-		PFLU_RS10325	0.30	-2.7
2,276,533	-		PFLU_RS10325	0.30	-2.5
2,276,533	-		PFLU_RS10325	0.30	-2.7
2,276,533	-		PFLU_RS10325	0.30	+0.1
2,276,533	-		PFLU_RS10325	0.30	-2.6
2,276,620	-		PFLU_RS10325	0.37	-3.5
2,276,620	-		PFLU_RS10325	0.37	-1.6
2,276,620	-		PFLU_RS10325	0.37	-1.2
2,276,631	-		PFLU_RS10325	0.38	-1.7
2,276,890	-		PFLU_RS10325	0.59	+1.1
2,276,890	-		PFLU_RS10325	0.59	-2.0
2,276,890	-		PFLU_RS10325	0.59	-3.4
2,277,102	+		PFLU_RS10325	0.76	-0.7
2,277,102	+		PFLU_RS10325	0.76	-1.5
2,277,102	+		PFLU_RS10325	0.76	-1.9
2,277,102	+		PFLU_RS10325	0.76	-1.7
2,277,103	-		PFLU_RS10325	0.76	-0.9
2,277,135	+		PFLU_RS10325	0.79	-1.9
2,277,135	+		PFLU_RS10325	0.79	-0.5
2,277,136	-		PFLU_RS10325	0.79	-0.2