Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS21960

Experiment: p-Coumaric 2 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric 2 mM (C)
4,943,669	-				-0.4
4,943,669	-				-1.4
4,943,757	-		PFLU_RS31030	0.11	+0.4
4,943,888	-		PFLU_RS31030	0.44	+0.4
4,943,888	-		PFLU_RS31030	0.44	-0.5
4,943,888	-		PFLU_RS31030	0.44	+2.6
4,943,972	+		PFLU_RS31030	0.66	+0.6
4,943,972	+		PFLU_RS31030	0.66	+0.8
4,943,972	+		PFLU_RS31030	0.66	-2.4
4,943,972	+		PFLU_RS31030	0.66	-1.7
4,943,972	+		PFLU_RS31030	0.66	+2.3
4,943,972	+		PFLU_RS31030	0.66	-1.0
4,943,972	+		PFLU_RS31030	0.66	-0.8
4,943,972	+		PFLU_RS31030	0.66	+0.4
4,943,972	+		PFLU_RS31030	0.66	-1.7
4,943,972	+		PFLU_RS31030	0.66	-1.8
4,943,972	+		PFLU_RS31030	0.66	+0.4
4,943,972	+		PFLU_RS31030	0.66	-0.6
4,943,973	-		PFLU_RS31030	0.66	+3.6
4,943,973	-		PFLU_RS31030	0.66	-0.6
4,943,973	-		PFLU_RS31030	0.66	+1.2
4,943,973	-		PFLU_RS31030	0.66	+0.6
4,943,973	-		PFLU_RS31030	0.66	+3.0
4,943,973	-		PFLU_RS31030	0.66	+0.7
4,943,973	-		PFLU_RS31030	0.66	+1.2
4,943,973	-		PFLU_RS31030	0.66	+0.4
4,943,973	-		PFLU_RS31030	0.66	-0.8
4,943,973	-		PFLU_RS31030	0.66	+2.5
4,943,973	-		PFLU_RS31030	0.66	+1.0
4,943,973	-		PFLU_RS31030	0.66	-0.8
4,943,973	-		PFLU_RS31030	0.66	-0.0
4,943,973	-		PFLU_RS31030	0.66	+1.0
4,943,976	+		PFLU_RS31030	0.67	+1.7
4,943,976	+		PFLU_RS31030	0.67	-0.4
4,943,976	+		PFLU_RS31030	0.67	-1.6
4,943,976	+		PFLU_RS31030	0.67	-2.7
4,943,976	+		PFLU_RS31030	0.67	-0.9
4,943,976	+		PFLU_RS31030	0.67	+1.0
4,943,976	+		PFLU_RS31030	0.67	-1.8
4,943,976	+		PFLU_RS31030	0.67	+0.1
4,943,976	+		PFLU_RS31030	0.67	-2.1
4,943,976	+		PFLU_RS31030	0.67	-2.0
4,943,976	+		PFLU_RS31030	0.67	-2.4
4,943,976	+		PFLU_RS31030	0.67	+0.4
4,943,976	+		PFLU_RS31030	0.67	-2.5
4,943,976	+		PFLU_RS31030	0.67	-0.4
4,943,976	+		PFLU_RS31030	0.67	-1.2
4,943,977	-		PFLU_RS31030	0.67	+2.0
4,943,977	-		PFLU_RS31030	0.67	+2.5
4,943,977	-		PFLU_RS31030	0.67	-0.3
4,943,977	-		PFLU_RS31030	0.67	-2.4
4,943,977	-		PFLU_RS31030	0.67	+1.0
4,943,977	-		PFLU_RS31030	0.67	-1.6
4,943,977	-		PFLU_RS31030	0.67	+2.6
4,943,977	-		PFLU_RS31030	0.67	+0.4
4,943,977	-		PFLU_RS31030	0.67	-1.2
4,943,977	-		PFLU_RS31030	0.67	+0.3
4,943,977	-		PFLU_RS31030	0.67	+3.2
4,943,980	+		PFLU_RS31030	0.68	-1.2
4,943,980	+		PFLU_RS31030	0.68	-1.0
4,943,980	+		PFLU_RS31030	0.68	-0.4
4,943,980	+		PFLU_RS31030	0.68	-0.8
4,943,980	+		PFLU_RS31030	0.68	-0.6
4,943,981	-		PFLU_RS31030	0.68	-0.2
4,943,981	-		PFLU_RS31030	0.68	+0.7
4,944,007	+		PFLU_RS31030	0.74	-0.2
4,944,007	+		PFLU_RS31030	0.74	-0.7
4,944,007	+		PFLU_RS31030	0.74	+2.6
4,944,007	+		PFLU_RS31030	0.74	-1.5
4,944,007	+		PFLU_RS31030	0.74	-0.6
4,944,007	+		PFLU_RS31030	0.74	-2.4
4,944,007	+		PFLU_RS31030	0.74	-0.4
4,944,007	+		PFLU_RS31030	0.74	+1.1
4,944,007	+		PFLU_RS31030	0.74	-0.5
4,944,008	-		PFLU_RS31030	0.75	+1.3
4,944,008	-		PFLU_RS31030	0.75	+0.4
4,944,008	-		PFLU_RS31030	0.75	-0.6
4,944,008	-		PFLU_RS31030	0.75	+0.6
4,944,008	-		PFLU_RS31030	0.75	+3.6
4,944,010	+		PFLU_RS31030	0.75	+2.0
4,944,011	-		PFLU_RS31030	0.76	-0.8
4,944,087	+				+1.4
4,944,087	+				-1.1
4,944,087	+				-2.0
4,944,087	+				-3.0
4,944,088	-				+0.2
4,944,088	-				-1.9
4,944,119	+				-1.5
4,944,119	+				-1.2
4,944,120	-				+0.4
4,944,120	-				-0.0
4,944,120	-				+1.4
4,944,120	-				+2.2
4,944,120	-				+0.1
4,944,131	+				+0.2
4,944,131	+				+1.0
4,944,131	+				-2.4
4,944,131	+				-0.1
4,944,131	+				+1.0
4,944,131	+				+2.6
4,944,131	+				-1.8
4,944,131	+				-0.6
4,944,131	+				+0.8
4,944,131	+				+1.1
4,944,132	-				-1.2
4,944,132	-				+1.4
4,944,132	-				+3.0
4,944,132	-				+0.4
4,944,132	-				+2.0
4,944,134	+				+2.2
4,944,134	+				+0.8
4,944,134	+				-0.8
4,944,134	+				-2.6
4,944,134	+				+1.0
4,944,134	+				-2.1
4,944,134	+				+0.4
4,944,134	+				+1.6
4,944,134	+				-1.9
4,944,134	+				-0.8
4,944,134	+				-2.2
4,944,134	+				-2.8
4,944,134	+				-0.8
4,944,134	+				-0.4
4,944,134	+				+1.0
4,944,134	+				+2.2
4,944,134	+				-0.6
4,944,134	+				-0.0
4,944,134	+				+2.0
4,944,134	+				-1.2
4,944,135	-				-0.4
4,944,135	-				-1.2
4,944,135	-				-0.0
4,944,135	-				+2.0
4,944,135	-				+0.7
4,944,135	-				-1.2
4,944,135	-				-0.0
4,944,135	-				+0.9
4,944,135	-				-0.5
4,944,135	-				-0.0
4,944,135	-				+0.1
4,944,135	-				+0.4
4,944,135	-				-1.6
4,944,135	-				-0.8
4,944,135	-				-0.4
4,944,135	-				+0.6
4,944,135	-				+5.1
4,944,135	-				+0.6
4,944,135	-				+3.6
4,944,135	-				+1.4
4,944,135	-				+5.3
4,944,135	-				+1.6
4,944,135	-				+0.6
4,944,135	-				+0.1
4,944,135	-				+1.1
4,944,135	-				+0.4
4,944,135	-				+0.8
4,944,135	-				-1.8
4,944,135	-				-0.3
4,944,135	-				+2.2
4,944,135	-				-1.0
4,944,143	+				+1.1
4,944,283	-		PFLU_RS21955	0.67	-0.6
4,944,294	+		PFLU_RS21955	0.72	-1.8
4,944,294	+		PFLU_RS21955	0.72	+2.0
4,944,294	+		PFLU_RS21955	0.72	-2.4
4,944,294	+		PFLU_RS21955	0.72	+1.1
4,944,294	+		PFLU_RS21955	0.72	-1.0
4,944,295	-		PFLU_RS21955	0.72	+2.5
4,944,332	+		PFLU_RS21955	0.89	-0.4
4,944,332	+		PFLU_RS21955	0.89	-2.3
4,944,333	-		PFLU_RS21955	0.89	-1.2
4,944,333	-		PFLU_RS21955	0.89	-1.7
4,944,333	-		PFLU_RS21955	0.89	+0.6
4,944,333	-		PFLU_RS21955	0.89	+2.6
4,944,333	-		PFLU_RS21955	0.89	-0.8
4,944,378	+				-1.7
4,944,424	+				-0.1
4,944,424	+				+3.5
4,944,424	+				+2.9
4,944,424	+				-2.1
4,944,424	+				+1.0
4,944,424	+				-0.0
4,944,424	+				-0.4
4,944,424	+				-0.2
4,944,425	-				+1.0
4,944,425	-				+2.0
4,944,425	-				-2.8
4,944,425	-				+1.0
4,944,425	-				-0.4
4,944,443	+				-0.4
4,944,443	+				-0.6
4,944,444	-				+1.2
4,944,444	-				+0.8
4,944,453	+				-0.6
4,944,454	-				-1.9
4,944,459	+				-0.4
4,944,459	+				+2.5
4,944,459	+				+1.4
4,944,480	+				-0.8
4,944,504	+				+1.0
4,944,516	-				+1.1
4,944,516	-				+0.3
4,944,516	-				+1.3
4,944,524	-				+2.7
4,944,524	-				+0.3
4,944,524	-				-0.0
4,944,634	+				+1.6
4,944,634	+				+2.6
4,944,635	-				-1.4
4,944,635	-				-1.7
4,944,665	+				+2.2
4,944,665	+				+2.6
4,944,665	+				+1.7
4,944,665	+				+1.6
4,944,665	+				+2.0
4,944,666	-				+0.2
4,944,666	-				+1.6
4,944,666	-				-3.0
4,944,684	+		PFLU_RS21960	0.10	+2.3
4,944,684	+		PFLU_RS21960	0.10	+1.8
4,944,684	+		PFLU_RS21960	0.10	+1.2
4,944,684	+		PFLU_RS21960	0.10	+2.2
4,944,684	+		PFLU_RS21960	0.10	+1.6
4,944,684	+		PFLU_RS21960	0.10	-0.3
4,944,684	+		PFLU_RS21960	0.10	+1.8
4,944,684	+		PFLU_RS21960	0.10	+2.3
4,944,684	+		PFLU_RS21960	0.10	+1.9
4,944,684	+		PFLU_RS21960	0.10	+1.7
4,944,685	-		PFLU_RS21960	0.10	-1.1
4,944,685	-		PFLU_RS21960	0.10	+0.8
4,944,685	-		PFLU_RS21960	0.10	-0.4
4,944,685	-		PFLU_RS21960	0.10	+1.2
4,944,689	+		PFLU_RS21960	0.11	+0.7
4,944,689	+		PFLU_RS21960	0.11	+0.6
4,944,689	+		PFLU_RS21960	0.11	+1.9
4,944,689	+		PFLU_RS21960	0.11	+1.1
4,944,689	+		PFLU_RS21960	0.11	+1.4
4,944,690	-		PFLU_RS21960	0.11	-0.4
4,944,690	-		PFLU_RS21960	0.11	+1.0
4,944,690	-		PFLU_RS21960	0.11	+0.6
4,944,690	-		PFLU_RS21960	0.11	+0.6
4,944,690	-		PFLU_RS21960	0.11	+0.9
4,944,690	-		PFLU_RS21960	0.11	-0.0
4,944,690	-		PFLU_RS21960	0.11	-0.7
4,944,794	+		PFLU_RS21960	0.33	+1.7
4,944,794	+		PFLU_RS21960	0.33	+2.5
4,944,794	+		PFLU_RS21960	0.33	+2.2
4,944,794	+		PFLU_RS21960	0.33	+1.3
4,944,794	+		PFLU_RS21960	0.33	+4.6
4,944,795	-		PFLU_RS21960	0.33	+1.0
4,944,795	-		PFLU_RS21960	0.33	+1.2
4,944,795	-		PFLU_RS21960	0.33	-0.8
4,944,825	+		PFLU_RS21960	0.39	+3.7
4,944,826	-		PFLU_RS21960	0.40	-1.3
4,944,826	-		PFLU_RS21960	0.40	+2.1
4,944,836	+		PFLU_RS21960	0.42	+3.2
4,944,836	+		PFLU_RS21960	0.42	+3.0
4,944,836	+		PFLU_RS21960	0.42	+2.1
4,944,836	+		PFLU_RS21960	0.42	+2.9
4,944,836	+		PFLU_RS21960	0.42	+3.5
4,944,836	+		PFLU_RS21960	0.42	+2.8
4,944,836	+		PFLU_RS21960	0.42	+2.2
4,944,836	+		PFLU_RS21960	0.42	+3.2
4,944,836	+		PFLU_RS21960	0.42	+3.4
4,944,836	+		PFLU_RS21960	0.42	+0.3
4,944,836	+		PFLU_RS21960	0.42	+3.7
4,944,837	-		PFLU_RS21960	0.42	+1.1
4,944,837	-		PFLU_RS21960	0.42	+1.6
4,944,837	-		PFLU_RS21960	0.42	+0.7
4,944,837	-		PFLU_RS21960	0.42	-0.8
4,944,837	-		PFLU_RS21960	0.42	+0.7
4,944,837	-		PFLU_RS21960	0.42	+0.0
4,944,837	-		PFLU_RS21960	0.42	+2.1
4,944,837	-		PFLU_RS21960	0.42	+2.6
4,944,837	-		PFLU_RS21960	0.42	+0.6
4,944,837	-		PFLU_RS21960	0.42	-1.0
4,944,837	-		PFLU_RS21960	0.42	+0.1
4,944,837	-		PFLU_RS21960	0.42	-1.5
4,944,928	-		PFLU_RS21960	0.61	-0.6
4,945,022	-		PFLU_RS21960	0.80	+1.3
4,945,022	-		PFLU_RS21960	0.80	+2.2
4,945,022	-		PFLU_RS21960	0.80	+1.3
4,945,035	+		PFLU_RS21960	0.83	+2.6
4,945,035	+		PFLU_RS21960	0.83	+4.4
4,945,183	+				+4.3
4,945,184	-				+2.9
4,945,192	+				+4.3
4,945,192	+				+4.2
4,945,193	-				+2.0
4,945,193	-				-0.5
4,945,195	+				+4.2
4,945,195	+				+4.6
4,945,195	+				+3.9
4,945,195	+				+3.8
4,945,195	+				+4.5
4,945,195	+				+3.6
4,945,195	+				+4.3
4,945,195	+				+4.1
4,945,196	-				+2.6
4,945,196	-				+0.8
4,945,196	-				+1.5
4,945,196	-				+2.3
4,945,196	-				+3.8
4,945,196	-				+1.6
4,945,196	-				+2.0
4,945,196	-				+1.1
4,945,202	+				+4.4
4,945,202	+				+3.6
4,945,202	+				+4.0
4,945,202	+				+3.8
4,945,202	+				+3.9
4,945,203	-				-0.6
4,945,203	-				-1.4
4,945,203	-				-1.4
4,945,203	-				-0.4
4,945,203	-				-1.0
4,945,204	+				+3.0
4,945,205	-				-0.8
4,945,221	+				+3.6
4,945,221	+				+3.4
4,945,221	+				+4.4
4,945,221	+				+2.8
4,945,221	+				+3.0
4,945,221	+				+2.5
4,945,221	+				+2.4
4,945,221	+				+2.2
4,945,227	+				-0.3
4,945,227	+				+2.8
4,945,228	-				-1.4
4,945,228	-				-0.4
4,945,259	+				+0.8
4,945,259	+				-2.4
4,945,259	+				+3.3
4,945,259	+				+0.4
4,945,259	+				-0.9
4,945,259	+				+2.6
4,945,259	+				+3.3
4,945,259	+				+3.0
4,945,260	-				+1.4
4,945,260	-				-2.6
4,945,260	-				-1.2
4,945,260	-				+0.8
4,945,260	-				-1.2
4,945,260	-				-1.9
4,945,260	-				-2.4
4,945,260	-				-1.0
4,945,260	-				-1.7
4,945,260	-				-0.0
4,945,260	-				-0.8
4,945,260	-				-1.5
4,945,260	-				-1.6
4,945,262	+				+1.0
4,945,262	+				+0.2
4,945,263	-				-2.0
4,945,274	+				+2.0
4,945,275	-				-2.4
4,945,275	-				-0.4
4,945,275	-				+0.4
4,945,293	+				-0.0
4,945,293	+				+0.6
4,945,293	+				-0.4
4,945,293	+				-1.5
4,945,293	+				-1.0
4,945,293	+				-1.0
4,945,294	-				+0.6
4,945,294	-				-2.2
4,945,294	-				-0.0
4,945,294	-				-2.4
4,945,294	-				-1.2
4,945,294	-				-2.1
4,945,416	+		PFLU_RS21965	0.12	-1.0
4,945,416	+		PFLU_RS21965	0.12	-1.3
4,945,416	+		PFLU_RS21965	0.12	-1.6
4,945,416	+		PFLU_RS21965	0.12	-2.1
4,945,416	+		PFLU_RS21965	0.12	-2.9
4,945,416	+		PFLU_RS21965	0.12	-1.9
4,945,416	+		PFLU_RS21965	0.12	-0.8
4,945,416	+		PFLU_RS21965	0.12	+0.4
4,945,416	+		PFLU_RS21965	0.12	-2.3
4,945,416	+		PFLU_RS21965	0.12	-1.9
4,945,416	+		PFLU_RS21965	0.12	-0.6
4,945,416	+		PFLU_RS21965	0.12	+0.6
4,945,417	-		PFLU_RS21965	0.12	-0.8
4,945,417	-		PFLU_RS21965	0.12	+1.5
4,945,417	-		PFLU_RS21965	0.12	+0.7
4,945,417	-		PFLU_RS21965	0.12	-0.6
4,945,417	-		PFLU_RS21965	0.12	+1.0
4,945,423	+		PFLU_RS21965	0.12	+2.7
4,945,588	+		PFLU_RS21965	0.25	+1.6
4,945,588	+		PFLU_RS21965	0.25	+0.7
4,945,588	+		PFLU_RS21965	0.25	-0.3
4,945,588	+		PFLU_RS21965	0.25	-2.5
4,945,588	+		PFLU_RS21965	0.25	+0.6
4,945,589	-		PFLU_RS21965	0.25	-0.6
4,945,633	+		PFLU_RS21965	0.28	-0.0
4,945,633	+		PFLU_RS21965	0.28	+0.6
4,945,633	+		PFLU_RS21965	0.28	-1.2
4,945,634	-		PFLU_RS21965	0.29	-1.7
4,945,634	-		PFLU_RS21965	0.29	-1.2
4,945,634	-		PFLU_RS21965	0.29	-1.0
4,945,634	-		PFLU_RS21965	0.29	-1.2
4,945,634	-		PFLU_RS21965	0.29	-0.8
4,945,634	-		PFLU_RS21965	0.29	-1.3
4,945,634	-		PFLU_RS21965	0.29	-0.8
4,945,634	-		PFLU_RS21965	0.29	-2.3
4,945,634	-		PFLU_RS21965	0.29	-2.1
4,945,634	-		PFLU_RS21965	0.29	-0.6
4,945,738	+		PFLU_RS21965	0.37	+0.7
4,945,738	+		PFLU_RS21965	0.37	-1.3
4,945,738	+		PFLU_RS21965	0.37	-1.5
4,945,738	+		PFLU_RS21965	0.37	-0.6
4,945,738	+		PFLU_RS21965	0.37	-1.3
4,945,738	+		PFLU_RS21965	0.37	-2.8
4,945,738	+		PFLU_RS21965	0.37	-1.3
4,945,738	+		PFLU_RS21965	0.37	-1.2
4,945,739	-		PFLU_RS21965	0.37	-2.1
4,945,739	-		PFLU_RS21965	0.37	-0.6
4,945,739	-		PFLU_RS21965	0.37	-0.8
4,945,739	-		PFLU_RS21965	0.37	-0.0
4,945,739	-		PFLU_RS21965	0.37	-1.5
4,945,739	-		PFLU_RS21965	0.37	-1.6
4,945,739	-		PFLU_RS21965	0.37	-0.7
4,945,739	-		PFLU_RS21965	0.37	-2.7
4,945,739	-		PFLU_RS21965	0.37	+0.4
4,945,739	-		PFLU_RS21965	0.37	+2.2
4,945,739	-		PFLU_RS21965	0.37	+0.6
4,945,848	+		PFLU_RS21965	0.45	+0.4
4,945,849	-		PFLU_RS21965	0.45	-1.9
4,945,849	-		PFLU_RS21965	0.45	+1.8
4,945,849	-		PFLU_RS21965	0.45	-0.6
4,945,888	-		PFLU_RS21965	0.48	+1.5
4,945,939	+		PFLU_RS21965	0.52	-0.0
4,945,939	+		PFLU_RS21965	0.52	+2.0
4,945,939	+		PFLU_RS21965	0.52	-2.0
4,945,939	+		PFLU_RS21965	0.52	-1.6
4,945,939	+		PFLU_RS21965	0.52	-1.3
4,945,940	-		PFLU_RS21965	0.52	+2.5
4,945,940	-		PFLU_RS21965	0.52	-0.0
4,945,940	-		PFLU_RS21965	0.52	+2.0
4,945,940	-		PFLU_RS21965	0.52	+0.8
4,945,957	+		PFLU_RS21965	0.53	-1.3
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4,945,957	+		PFLU_RS21965	0.53	+1.8
4,945,957	+		PFLU_RS21965	0.53	-0.3
4,945,957	+		PFLU_RS21965	0.53	-0.3
4,945,957	+		PFLU_RS21965	0.53	+0.9
4,945,958	-		PFLU_RS21965	0.54	+0.7
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4,945,958	-		PFLU_RS21965	0.54	-1.7
4,945,974	+		PFLU_RS21965	0.55	-1.9
4,945,975	-		PFLU_RS21965	0.55	-0.0
4,945,975	-		PFLU_RS21965	0.55	-1.8
4,946,110	+		PFLU_RS21965	0.65	-0.6
4,946,110	+		PFLU_RS21965	0.65	-2.3
4,946,110	+		PFLU_RS21965	0.65	-3.2
4,946,110	+		PFLU_RS21965	0.65	+0.3
4,946,110	+		PFLU_RS21965	0.65	-2.2
4,946,111	-		PFLU_RS21965	0.65	+0.9
4,946,111	-		PFLU_RS21965	0.65	+0.4
4,946,111	-		PFLU_RS21965	0.65	-1.6
4,946,111	-		PFLU_RS21965	0.65	-0.6
4,946,111	-		PFLU_RS21965	0.65	-2.6
4,946,111	-		PFLU_RS21965	0.65	+3.8