Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS15085

Experiment: p-Coumaric 2 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric 2 mM (C)
3,373,418	+		PFLU_RS15080	0.76	+1.9
3,373,440	+		PFLU_RS15080	0.78	+0.9
3,373,440	+		PFLU_RS15080	0.78	-0.8
3,373,440	+		PFLU_RS15080	0.78	-0.8
3,373,440	+		PFLU_RS15080	0.78	+0.3
3,373,440	+		PFLU_RS15080	0.78	+0.0
3,373,441	-		PFLU_RS15080	0.78	+0.6
3,373,442	+		PFLU_RS15080	0.78	+1.5
3,373,442	+		PFLU_RS15080	0.78	-0.9
3,373,443	-		PFLU_RS15080	0.78	-2.9
3,373,554	-		PFLU_RS15080	0.85	-0.6
3,373,554	-		PFLU_RS15080	0.85	-1.3
3,373,756	+				+0.4
3,373,756	+				+1.7
3,373,756	+				-0.5
3,373,756	+				-1.0
3,373,756	+				-0.8
3,373,756	+				-0.1
3,373,757	-				-1.1
3,373,757	-				+0.1
3,373,757	-				-1.1
3,373,757	-				-1.5
3,373,757	-				+1.0
3,373,757	-				-0.9
3,373,757	-				-1.9
3,373,776	+				-0.6
3,373,776	+				-2.7
3,373,777	-				+1.6
3,373,777	-				+0.2
3,373,777	-				+0.2
3,373,777	-				-2.5
3,373,781	+				+0.5
3,373,782	-				+0.7
3,373,868	+				-0.1
3,374,006	+				-1.8
3,374,097	+				+0.3
3,374,097	+				-0.1
3,374,098	-				+0.5
3,374,346	+		PFLU_RS15085	0.11	+1.1
3,374,347	-		PFLU_RS15085	0.11	+0.3
3,374,347	-		PFLU_RS15085	0.11	-1.4
3,374,487	+		PFLU_RS15085	0.18	-0.1
3,374,488	-		PFLU_RS15085	0.18	-0.2
3,374,488	-		PFLU_RS15085	0.18	-0.3
3,374,584	-		PFLU_RS15085	0.23	-0.1
3,374,689	-		PFLU_RS15085	0.28	-0.5
3,374,689	-		PFLU_RS15085	0.28	-0.7
3,374,734	-		PFLU_RS15085	0.30	-1.5
3,374,776	+		PFLU_RS15085	0.32	-1.1
3,374,776	+		PFLU_RS15085	0.32	+1.5
3,374,777	-		PFLU_RS15085	0.32	-0.2
3,374,880	+		PFLU_RS15085	0.37	+0.3
3,374,880	+		PFLU_RS15085	0.37	-0.7
3,374,926	+		PFLU_RS15085	0.40	+0.1
3,374,926	+		PFLU_RS15085	0.40	+0.8
3,374,968	+		PFLU_RS15085	0.42	-1.6
3,374,969	-		PFLU_RS15085	0.42	+0.1
3,375,324	-		PFLU_RS15085	0.59	+0.2
3,375,635	+		PFLU_RS15085	0.74	-1.1
3,375,697	+		PFLU_RS15085	0.77	-1.5
3,375,697	+		PFLU_RS15085	0.77	+1.6
3,375,697	+		PFLU_RS15085	0.77	+0.9
3,375,698	-		PFLU_RS15085	0.77	+0.9
3,375,761	-		PFLU_RS15085	0.80	-3.1
3,375,817	+		PFLU_RS15085	0.83	-1.7
3,375,817	+		PFLU_RS15085	0.83	-1.3
3,375,818	-		PFLU_RS15085	0.83	-1.9
3,375,818	-		PFLU_RS15085	0.83	-0.2
3,375,942	-		PFLU_RS15085	0.89	-1.3
3,375,942	-		PFLU_RS15085	0.89	-2.1
3,375,942	-		PFLU_RS15085	0.89	-0.5
3,375,942	-		PFLU_RS15085	0.89	-0.1
3,376,010	+				+1.5
3,376,187	+				-0.6
3,376,187	+				+1.2
3,376,188	-				-2.5
3,376,212	+				+0.2
3,376,213	-				+0.5
3,376,310	+				+3.4
3,376,382	+		PFLU_RS15090	0.10	-0.2
3,376,382	+		PFLU_RS15090	0.10	-1.5
3,376,382	+		PFLU_RS15090	0.10	+0.4
3,376,382	+		PFLU_RS15090	0.10	-0.5
3,376,382	+		PFLU_RS15090	0.10	+1.7
3,376,382	+		PFLU_RS15090	0.10	+0.5
3,376,382	+		PFLU_RS15090	0.10	-0.8
3,376,383	-		PFLU_RS15090	0.10	-0.2
3,376,383	-		PFLU_RS15090	0.10	-1.9
3,376,383	-		PFLU_RS15090	0.10	+1.5
3,376,383	-		PFLU_RS15090	0.10	+0.5
3,376,637	-		PFLU_RS15090	0.27	-1.3
3,376,638	+		PFLU_RS15090	0.27	-2.3
3,376,638	+		PFLU_RS15090	0.27	+0.7
3,376,639	-		PFLU_RS15090	0.27	-1.1
3,377,077	-		PFLU_RS15090	0.57	-0.7