Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS13255

Experiment: p-Coumaric 2 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric 2 mM (C)
2,996,187	+				+1.9
2,996,187	+				+0.5
2,996,187	+				-0.1
2,996,187	+				-0.8
2,996,188	-				+0.5
2,996,188	-				+0.5
2,996,188	-				-2.3
2,996,188	-				+3.1
2,996,188	-				+1.9
2,996,211	+				-2.1
2,996,211	+				+1.3
2,996,211	+				-0.7
2,996,211	+				+1.7
2,996,211	+				+0.7
2,996,211	+				+2.7
2,996,211	+				-0.1
2,996,212	-				+0.8
2,996,212	-				+0.5
2,996,212	-				+1.5
2,996,212	-				+1.5
2,996,212	-				-1.7
2,996,212	-				+0.1
2,996,212	-				-1.5
2,996,212	-				-0.2
2,996,212	-				-0.1
2,996,212	-				+3.1
2,996,212	-				+2.4
2,996,212	-				+0.5
2,996,231	+				-0.1
2,996,309	+		PFLU_RS13250	0.11	-2.1
2,996,310	-		PFLU_RS13250	0.11	-0.5
2,996,445	+		PFLU_RS13250	0.25	+0.7
2,996,445	+		PFLU_RS13250	0.25	+0.5
2,996,448	+		PFLU_RS13250	0.25	-2.2
2,996,448	+		PFLU_RS13250	0.25	+1.5
2,996,449	-		PFLU_RS13250	0.25	+0.1
2,996,449	-		PFLU_RS13250	0.25	-1.7
2,996,449	-		PFLU_RS13250	0.25	-0.5
2,996,503	-		PFLU_RS13250	0.31	+1.3
2,996,503	-		PFLU_RS13250	0.31	-2.2
2,996,664	-		PFLU_RS13250	0.48	+0.4
2,996,664	-		PFLU_RS13250	0.48	+1.3
2,996,832	+		PFLU_RS13250	0.66	-0.1
2,996,833	-		PFLU_RS13250	0.66	+1.7
2,996,833	-		PFLU_RS13250	0.66	+2.1
2,997,260	+		PFLU_RS13255	0.15	+1.5
2,997,260	+		PFLU_RS13255	0.15	-2.2
2,997,260	+		PFLU_RS13255	0.15	-2.8
2,997,260	+		PFLU_RS13255	0.15	+1.9
2,997,260	+		PFLU_RS13255	0.15	+0.9
2,997,260	+		PFLU_RS13255	0.15	-0.1
2,997,260	+		PFLU_RS13255	0.15	-2.4
2,997,261	-		PFLU_RS13255	0.15	+2.3
2,997,261	-		PFLU_RS13255	0.15	-1.1
2,997,261	-		PFLU_RS13255	0.15	-1.1
2,997,261	-		PFLU_RS13255	0.15	+0.7
2,997,261	-		PFLU_RS13255	0.15	+0.5
2,997,261	-		PFLU_RS13255	0.15	-2.2
2,997,373	+		PFLU_RS13255	0.29	-0.7
2,997,373	+		PFLU_RS13255	0.29	+1.7
2,997,374	-		PFLU_RS13255	0.29	-0.8
2,997,613	+		PFLU_RS13255	0.60	-1.8
2,997,815	+		PFLU_RS13255	0.86	+3.0
2,997,815	+		PFLU_RS13255	0.86	+0.9
2,997,815	+		PFLU_RS13255	0.86	-0.9
2,997,816	-		PFLU_RS13255	0.86	-0.4
2,997,816	-		PFLU_RS13255	0.86	-1.8
2,997,816	-		PFLU_RS13255	0.86	-0.1
2,997,816	-		PFLU_RS13255	0.86	+0.6
2,997,889	+				+1.5
2,997,916	+				+2.6
2,997,916	+				+1.5
2,997,917	-				-0.1
2,997,917	-				+0.9
2,997,920	+				-0.9
2,997,920	+				+1.2
2,997,920	+				-0.8
2,997,920	+				-1.4
2,997,920	+				-2.2
2,997,920	+				-1.1
2,997,920	+				-1.1
2,997,920	+				-1.3
2,997,920	+				+0.9
2,997,920	+				-0.1
2,997,920	+				+0.7
2,997,920	+				-2.3
2,997,920	+				+0.6
2,997,920	+				+0.3
2,997,920	+				+2.1
2,997,920	+				-0.9
2,997,920	+				-1.2
2,997,920	+				-0.9
2,997,920	+				-0.5
2,997,920	+				+0.3
2,997,920	+				+0.4
2,997,920	+				-1.9
2,997,920	+				+1.8
2,997,920	+				-1.5
2,997,920	+				-0.1
2,997,920	+				+2.4
2,997,920	+				+0.2
2,997,921	-				-1.1
2,997,921	-				+1.2
2,997,921	-				-3.0
2,997,921	-				-2.5
2,997,921	-				+1.5
2,997,921	-				+1.8
2,997,921	-				-2.7
2,997,921	-				-1.7
2,997,921	-				+0.3
2,997,921	-				-2.3
2,997,921	-				-0.5
2,997,921	-				+1.3
2,997,921	-				-0.1
2,997,921	-				-2.1
2,997,921	-				+0.3
2,997,921	-				-2.1
2,997,921	-				+0.5
2,997,921	-				-2.2
2,997,921	-				+0.5
2,997,921	-				+1.9
2,997,921	-				-1.4
2,997,921	-				+0.7
2,997,921	-				+1.5
2,997,921	-				+0.7
2,997,921	-				-1.8
2,997,921	-				+0.7
2,997,921	-				-0.4
2,997,921	-				-0.5
2,997,921	-				-1.3
2,997,971	-				-0.5
2,998,219	+		PFLU_RS13260	0.20	-0.8
2,998,552	-		PFLU_RS13260	0.51	-0.2
2,998,703	+		PFLU_RS13260	0.65	+0.2
2,998,703	+		PFLU_RS13260	0.65	+1.7
2,998,703	+		PFLU_RS13260	0.65	+0.0
2,998,703	+		PFLU_RS13260	0.65	-1.1
2,998,703	+		PFLU_RS13260	0.65	-2.6
2,998,703	+		PFLU_RS13260	0.65	-2.9
2,998,703	+		PFLU_RS13260	0.65	+2.0
2,998,703	+		PFLU_RS13260	0.65	-1.5
2,998,703	+		PFLU_RS13260	0.65	+0.6
2,998,703	+		PFLU_RS13260	0.65	+0.1
2,998,703	+		PFLU_RS13260	0.65	+1.5
2,998,704	-		PFLU_RS13260	0.65	-0.1
2,998,704	-		PFLU_RS13260	0.65	+1.4
2,998,704	-		PFLU_RS13260	0.65	+1.1
2,998,704	-		PFLU_RS13260	0.65	+0.3
2,998,776	-		PFLU_RS13260	0.72	-0.8
2,998,826	+		PFLU_RS13260	0.76	-2.3
2,998,827	-		PFLU_RS13260	0.77	+1.2
2,998,827	-		PFLU_RS13260	0.77	-0.2
2,998,827	-		PFLU_RS13260	0.77	-1.1