Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS11000

Experiment: p-Coumaric 2 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric 2 mM (C)
2,425,436	-		PFLU_RS10990	0.89	-2.1
2,425,436	-		PFLU_RS10990	0.89	-1.5
2,425,465	+				+1.3
2,425,465	+				-1.0
2,425,466	-				+0.0
2,425,510	+				+0.1
2,425,511	-				+0.5
2,425,519	+				-1.2
2,425,520	-				-0.1
2,425,520	-				-2.0
2,425,657	+		PFLU_RS10995	0.17	+0.3
2,425,802	+		PFLU_RS10995	0.35	-0.4
2,425,802	+		PFLU_RS10995	0.35	-1.2
2,425,802	+		PFLU_RS10995	0.35	+0.5
2,425,803	-		PFLU_RS10995	0.35	+0.2
2,426,165	+		PFLU_RS10995	0.78	+0.2
2,426,166	-		PFLU_RS10995	0.78	+0.2
2,426,306	+				-2.6
2,426,307	-				-1.2
2,426,345	+				+0.4
2,426,348	+				+1.0
2,426,506	-		PFLU_RS11000	0.24	-1.7
2,426,506	-		PFLU_RS11000	0.24	+0.2
2,426,596	+		PFLU_RS11000	0.39	-2.0
2,426,596	+		PFLU_RS11000	0.39	-1.0
2,426,625	+		PFLU_RS11000	0.44	+0.9
2,426,689	+		PFLU_RS11000	0.54	+2.4
2,426,689	+		PFLU_RS11000	0.54	-0.2
2,426,690	-		PFLU_RS11000	0.54	+2.7
2,426,690	-		PFLU_RS11000	0.54	-0.5
2,426,690	-		PFLU_RS11000	0.54	-1.8
2,426,690	-		PFLU_RS11000	0.54	+0.5
2,426,690	-		PFLU_RS11000	0.54	+3.2
2,426,953	+				-0.4
2,426,953	+				-1.7
2,426,953	+				+1.2
2,426,987	+				+3.8
2,426,987	+				-0.7
2,426,987	+				+2.0
2,426,988	-				-1.9
2,427,054	-		PFLU_RS11005	0.15	+1.2
2,427,189	+		PFLU_RS11005	0.35	+0.6
2,427,189	+		PFLU_RS11005	0.35	+0.1
2,427,190	-		PFLU_RS11005	0.35	+0.6
2,427,190	-		PFLU_RS11005	0.35	+0.4
2,427,190	-		PFLU_RS11005	0.35	-0.3
2,427,190	-		PFLU_RS11005	0.35	-0.7
2,427,281	+		PFLU_RS11005	0.49	-2.2
2,427,281	+		PFLU_RS11005	0.49	+2.2
2,427,282	-		PFLU_RS11005	0.49	+1.8
2,427,282	-		PFLU_RS11005	0.49	-0.9
2,427,282	-		PFLU_RS11005	0.49	-0.3
2,427,381	+		PFLU_RS11005	0.64	+0.6
2,427,381	+		PFLU_RS11005	0.64	+0.6
2,427,382	-		PFLU_RS11005	0.65	+0.1
2,427,383	+		PFLU_RS11005	0.65	+1.8
2,427,383	+		PFLU_RS11005	0.65	+1.4
2,427,383	+		PFLU_RS11005	0.65	-1.2
2,427,417	+		PFLU_RS11005	0.70	+0.6
2,427,421	+		PFLU_RS11005	0.70	+1.2
2,427,561	+				+1.1
2,427,562	-				+0.1
2,427,620	-				-2.9
2,427,727	-				+0.7
2,427,765	+				+1.6
2,427,829	-				+1.5
2,427,898	+				-0.1
2,427,898	+				+1.1
2,427,898	+				+0.6
2,427,898	+				+1.4
2,427,898	+				+0.5
2,427,898	+				+2.2
2,427,899	-				-2.1
2,427,899	-				+1.1
2,427,899	-				+0.2
2,427,899	-				+1.6