Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS09735

Experiment: p-Coumaric 2 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric 2 mM (C)
2,146,880	+		PFLU_RS09730	0.44	-0.3
2,146,892	+		PFLU_RS09730	0.46	+0.3
2,146,892	+		PFLU_RS09730	0.46	+1.6
2,146,892	+		PFLU_RS09730	0.46	+1.1
2,146,920	+		PFLU_RS09730	0.49	+1.8
2,146,953	+		PFLU_RS09730	0.54	-0.8
2,146,953	+		PFLU_RS09730	0.54	+2.7
2,146,953	+		PFLU_RS09730	0.54	+0.6
2,146,954	-		PFLU_RS09730	0.54	+1.6
2,146,954	-		PFLU_RS09730	0.54	+3.9
2,147,164	-		PFLU_RS09730	0.82	-2.0
2,147,164	-		PFLU_RS09730	0.82	+1.1
2,147,289	+				-1.8
2,147,397	-				+1.8
2,147,409	+				+1.9
2,147,409	+				-0.5
2,147,409	+				+2.0
2,147,410	-				-2.3
2,147,410	-				-2.0
2,147,410	-				-1.8
2,147,410	-				+0.1
2,147,410	-				+1.8
2,147,413	+				-2.2
2,147,438	-				-1.2
2,147,448	+				+1.0
2,147,448	+				+3.4
2,147,449	-				-0.5
2,147,511	+				-2.1
2,147,546	+				+0.8
2,147,546	+				-1.9
2,147,547	-				+0.1
2,147,712	+		PFLU_RS09735	0.17	-1.8
2,147,712	+		PFLU_RS09735	0.17	-0.2
2,147,713	-		PFLU_RS09735	0.17	-1.2
2,147,867	-		PFLU_RS09735	0.30	-1.6
2,147,892	-		PFLU_RS09735	0.32	+2.0
2,147,896	+		PFLU_RS09735	0.32	+0.8
2,147,896	+		PFLU_RS09735	0.32	+0.0
2,147,902	+		PFLU_RS09735	0.33	+2.1
2,147,902	+		PFLU_RS09735	0.33	-0.6
2,147,903	-		PFLU_RS09735	0.33	+2.9
2,147,903	-		PFLU_RS09735	0.33	-0.7
2,147,912	+		PFLU_RS09735	0.34	+1.7
2,147,913	-		PFLU_RS09735	0.34	-1.2
2,147,915	+		PFLU_RS09735	0.34	-2.4
2,147,916	-		PFLU_RS09735	0.34	+1.8
2,147,916	-		PFLU_RS09735	0.34	-0.1
2,147,920	+		PFLU_RS09735	0.34	-1.0
2,147,920	+		PFLU_RS09735	0.34	+2.0
2,147,921	-		PFLU_RS09735	0.35	-2.0
2,147,921	-		PFLU_RS09735	0.35	-3.0
2,148,190	+		PFLU_RS09735	0.57	+0.8
2,148,190	+		PFLU_RS09735	0.57	+1.1
2,148,190	+		PFLU_RS09735	0.57	-1.9
2,148,190	+		PFLU_RS09735	0.57	+0.8
2,148,191	-		PFLU_RS09735	0.57	+1.2
2,148,215	+		PFLU_RS09735	0.59	-0.5
2,148,225	+		PFLU_RS09735	0.60	-1.6
2,148,226	-		PFLU_RS09735	0.60	-3.7
2,148,226	-		PFLU_RS09735	0.60	-0.1
2,148,282	+		PFLU_RS09735	0.65	+0.3
2,148,282	+		PFLU_RS09735	0.65	+0.2
2,148,283	-		PFLU_RS09735	0.65	+0.1
2,148,283	-		PFLU_RS09735	0.65	+4.5
2,148,373	+		PFLU_RS09735	0.72	-0.5
2,148,373	+		PFLU_RS09735	0.72	+0.2
2,148,373	+		PFLU_RS09735	0.72	+1.9
2,148,374	-		PFLU_RS09735	0.73	-2.4
2,148,374	-		PFLU_RS09735	0.73	-0.4
2,148,423	+		PFLU_RS09735	0.77	+0.7
2,148,499	+		PFLU_RS09735	0.83	-2.6
2,148,499	+		PFLU_RS09735	0.83	-2.6
2,148,713	+				-0.6
2,148,714	-				-0.8
2,148,714	-				+0.1
2,148,814	+		PFLU_RS09740	0.21	-2.5
2,148,815	-		PFLU_RS09740	0.21	-1.2
2,148,815	-		PFLU_RS09740	0.21	+1.4
2,148,889	+		PFLU_RS09740	0.35	-1.5
2,148,889	+		PFLU_RS09740	0.35	+0.8
2,148,890	-		PFLU_RS09740	0.35	-0.5
2,148,947	+		PFLU_RS09740	0.46	-1.2
2,148,947	+		PFLU_RS09740	0.46	+1.8
2,148,947	+		PFLU_RS09740	0.46	+1.9
2,148,947	+		PFLU_RS09740	0.46	+2.7
2,148,947	+		PFLU_RS09740	0.46	+2.0
2,148,948	-		PFLU_RS09740	0.46	-1.8
2,148,948	-		PFLU_RS09740	0.46	-0.3
2,148,948	-		PFLU_RS09740	0.46	-1.4
2,148,948	-		PFLU_RS09740	0.46	-0.5
2,149,105	-		PFLU_RS09740	0.74	+1.8
2,149,130	+		PFLU_RS09740	0.79	-1.3
2,149,130	+		PFLU_RS09740	0.79	+2.5
2,149,130	+		PFLU_RS09740	0.79	-0.7
2,149,130	+		PFLU_RS09740	0.79	+1.1
2,149,130	+		PFLU_RS09740	0.79	+2.9
2,149,131	-		PFLU_RS09740	0.79	-1.4
2,149,131	-		PFLU_RS09740	0.79	-2.1
2,149,131	-		PFLU_RS09740	0.79	-1.0
2,149,131	-		PFLU_RS09740	0.79	-0.5
2,149,131	-		PFLU_RS09740	0.79	-0.2
2,149,131	-		PFLU_RS09740	0.79	-0.7
2,149,131	-		PFLU_RS09740	0.79	+0.4
2,149,131	-		PFLU_RS09740	0.79	-1.8
2,149,195	+				-0.2
2,149,245	+				-2.7
2,149,245	+				+3.3
2,149,245	+				-0.6
2,149,246	-				-1.9
2,149,278	-				+1.1
2,149,322	-				-2.2
2,149,399	+				-0.2
2,149,399	+				-1.6
2,149,399	+				-2.2
2,149,399	+				-0.9
2,149,400	-				+3.4
2,149,400	-				+0.6
2,149,400	-				+2.1
2,149,400	-				-0.0
2,149,400	-				-1.0
2,149,400	-				+2.3
2,149,400	-				-1.9
2,149,445	+		PFLU_RS09745	0.13	+2.4
2,149,445	+		PFLU_RS09745	0.13	-1.4
2,149,446	-		PFLU_RS09745	0.13	-0.2
2,149,446	-		PFLU_RS09745	0.13	+1.1
2,149,549	-		PFLU_RS09745	0.19	-1.2
2,149,603	+		PFLU_RS09745	0.23	+0.7
2,149,603	+		PFLU_RS09745	0.23	-2.7
2,149,699	+		PFLU_RS09745	0.29	+1.0
2,149,699	+		PFLU_RS09745	0.29	-0.1
2,149,699	+		PFLU_RS09745	0.29	+0.5
2,149,699	+		PFLU_RS09745	0.29	+0.2
2,149,699	+		PFLU_RS09745	0.29	-2.5
2,149,699	+		PFLU_RS09745	0.29	-1.0
2,149,699	+		PFLU_RS09745	0.29	-0.1
2,149,699	+		PFLU_RS09745	0.29	+0.1
2,149,699	+		PFLU_RS09745	0.29	+0.8
2,149,700	-		PFLU_RS09745	0.29	+0.6
2,149,700	-		PFLU_RS09745	0.29	-2.8
2,149,700	-		PFLU_RS09745	0.29	+0.8
2,149,700	-		PFLU_RS09745	0.29	+0.8
2,149,700	-		PFLU_RS09745	0.29	+1.8