Experiment: p-Coumaric 2 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS24285 and PFLU_RS24290 are separated by 61 nucleotides PFLU_RS24290 and PFLU_RS24295 are separated by 176 nucleotides PFLU_RS24295 and PFLU_RS24300 are separated by 114 nucleotides PFLU_RS24300 and PFLU_RS24305 are separated by 44 nucleotides
PFLU_RS24285: PFLU_RS24285 - MFS transporter, at 5,438,119 to 5,439,438
_RS24285
PFLU_RS24290: PFLU_RS24290 - membrane protein, at 5,439,500 to 5,440,255
_RS24290
PFLU_RS24295: PFLU_RS24295 - flavin reductase family protein, at 5,440,432 to 5,441,064
_RS24295
PFLU_RS24300: PFLU_RS24300 - hypothetical protein, at 5,441,179 to 5,441,424
_RS24300
PFLU_RS24305: PFLU_RS24305 - antibiotic biosynthesis monooxygenase, at 5,441,469 to 5,441,810
_RS24305
Position (kb) 5440
5441
5442 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 5439.436 kb on + strand at 5439.546 kb on + strand at 5439.546 kb on + strand at 5439.546 kb on + strand at 5439.547 kb on - strand at 5439.547 kb on - strand at 5439.547 kb on - strand at 5439.729 kb on + strand, within PFLU_RS24290 at 5439.729 kb on + strand, within PFLU_RS24290 at 5439.729 kb on + strand, within PFLU_RS24290 at 5439.729 kb on + strand, within PFLU_RS24290 at 5439.729 kb on + strand, within PFLU_RS24290 at 5439.729 kb on + strand, within PFLU_RS24290 at 5439.729 kb on + strand, within PFLU_RS24290 at 5439.730 kb on - strand, within PFLU_RS24290 at 5439.730 kb on - strand, within PFLU_RS24290 at 5439.730 kb on - strand, within PFLU_RS24290 at 5439.730 kb on - strand, within PFLU_RS24290 at 5439.864 kb on + strand, within PFLU_RS24290 at 5439.864 kb on + strand, within PFLU_RS24290 at 5439.865 kb on - strand, within PFLU_RS24290 at 5439.865 kb on - strand, within PFLU_RS24290 at 5439.865 kb on - strand, within PFLU_RS24290 at 5440.021 kb on + strand, within PFLU_RS24290 at 5440.021 kb on + strand, within PFLU_RS24290 at 5440.022 kb on - strand, within PFLU_RS24290 at 5440.022 kb on - strand, within PFLU_RS24290 at 5440.059 kb on + strand, within PFLU_RS24290 at 5440.059 kb on + strand, within PFLU_RS24290 at 5440.059 kb on + strand, within PFLU_RS24290 at 5440.060 kb on - strand, within PFLU_RS24290 at 5440.074 kb on + strand, within PFLU_RS24290 at 5440.074 kb on + strand, within PFLU_RS24290 at 5440.074 kb on + strand, within PFLU_RS24290 at 5440.074 kb on + strand, within PFLU_RS24290 at 5440.075 kb on - strand, within PFLU_RS24290 at 5440.075 kb on - strand, within PFLU_RS24290 at 5440.075 kb on - strand, within PFLU_RS24290 at 5440.075 kb on - strand, within PFLU_RS24290 at 5440.075 kb on - strand, within PFLU_RS24290 at 5440.075 kb on - strand, within PFLU_RS24290 at 5440.075 kb on - strand, within PFLU_RS24290 at 5440.146 kb on + strand, within PFLU_RS24290 at 5440.146 kb on + strand, within PFLU_RS24290 at 5440.260 kb on + strand at 5440.260 kb on + strand at 5440.260 kb on + strand at 5440.261 kb on - strand at 5440.261 kb on - strand at 5440.333 kb on - strand at 5440.333 kb on - strand at 5440.394 kb on - strand at 5440.394 kb on - strand at 5440.394 kb on - strand at 5440.394 kb on - strand at 5440.453 kb on + strand at 5440.453 kb on + strand at 5440.453 kb on + strand at 5440.453 kb on + strand at 5440.453 kb on + strand at 5440.454 kb on - strand at 5440.454 kb on - strand at 5440.454 kb on - strand at 5440.454 kb on - strand at 5440.454 kb on - strand at 5440.570 kb on + strand, within PFLU_RS24295 at 5440.571 kb on - strand, within PFLU_RS24295 at 5440.571 kb on - strand, within PFLU_RS24295 at 5440.571 kb on - strand, within PFLU_RS24295 at 5440.594 kb on + strand, within PFLU_RS24295 at 5440.594 kb on + strand, within PFLU_RS24295 at 5440.594 kb on + strand, within PFLU_RS24295 at 5440.594 kb on + strand, within PFLU_RS24295 at 5440.594 kb on + strand, within PFLU_RS24295 at 5440.594 kb on + strand, within PFLU_RS24295 at 5440.594 kb on + strand, within PFLU_RS24295 at 5440.594 kb on + strand, within PFLU_RS24295 at 5440.595 kb on - strand, within PFLU_RS24295 at 5440.595 kb on - strand, within PFLU_RS24295 at 5440.595 kb on - strand, within PFLU_RS24295 at 5440.595 kb on - strand, within PFLU_RS24295 at 5440.595 kb on - strand, within PFLU_RS24295 at 5440.595 kb on - strand, within PFLU_RS24295 at 5440.951 kb on + strand, within PFLU_RS24295 at 5440.951 kb on + strand, within PFLU_RS24295 at 5441.002 kb on + strand at 5441.003 kb on - strand at 5441.003 kb on - strand at 5441.038 kb on + strand at 5441.038 kb on + strand at 5441.039 kb on - strand at 5441.039 kb on - strand at 5441.039 kb on - strand at 5441.039 kb on - strand at 5441.039 kb on - strand at 5441.039 kb on - strand at 5441.134 kb on - strand at 5441.134 kb on - strand at 5441.140 kb on + strand at 5441.140 kb on + strand at 5441.140 kb on + strand at 5441.140 kb on - strand at 5441.141 kb on - strand at 5441.141 kb on - strand at 5441.180 kb on + strand at 5441.180 kb on + strand at 5441.180 kb on + strand at 5441.180 kb on + strand at 5441.181 kb on - strand at 5441.360 kb on + strand, within PFLU_RS24300 at 5441.361 kb on - strand, within PFLU_RS24300 at 5441.380 kb on + strand, within PFLU_RS24300 at 5441.380 kb on + strand, within PFLU_RS24300 at 5441.380 kb on + strand, within PFLU_RS24300 at 5441.381 kb on - strand, within PFLU_RS24300 at 5441.381 kb on - strand, within PFLU_RS24300 at 5441.381 kb on - strand, within PFLU_RS24300 at 5441.415 kb on + strand at 5441.415 kb on + strand at 5441.415 kb on + strand at 5441.415 kb on + strand at 5441.415 kb on + strand at 5441.415 kb on + strand at 5441.416 kb on - strand at 5441.416 kb on - strand at 5441.416 kb on - strand at 5441.416 kb on - strand at 5441.461 kb on - strand at 5441.488 kb on + strand at 5441.488 kb on + strand at 5441.489 kb on - strand at 5441.489 kb on - strand at 5441.498 kb on - strand at 5441.602 kb on + strand, within PFLU_RS24305 at 5441.602 kb on + strand, within PFLU_RS24305 at 5441.603 kb on - strand, within PFLU_RS24305 at 5441.603 kb on - strand, within PFLU_RS24305 at 5441.783 kb on + strand at 5441.783 kb on + strand at 5441.783 kb on + strand at 5441.784 kb on - strand at 5441.784 kb on - strand at 5441.784 kb on - strand at 5441.924 kb on - strand at 5441.924 kb on - strand at 5441.924 kb on - strand at 5441.947 kb on + strand at 5441.947 kb on + strand at 5441.974 kb on - strand at 5441.974 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction p-Coumaric 2 mM (C) remove 5,439,436 + -0.8 5,439,546 + +0.9 5,439,546 + -0.8 5,439,546 + -0.9 5,439,547 - +0.9 5,439,547 - +2.0 5,439,547 - +2.7 5,439,729 + PFLU_RS24290 0.30 +0.9 5,439,729 + PFLU_RS24290 0.30 -0.6 5,439,729 + PFLU_RS24290 0.30 -2.9 5,439,729 + PFLU_RS24290 0.30 -1.6 5,439,729 + PFLU_RS24290 0.30 +2.8 5,439,729 + PFLU_RS24290 0.30 +1.9 5,439,729 + PFLU_RS24290 0.30 +0.2 5,439,730 - PFLU_RS24290 0.30 -2.3 5,439,730 - PFLU_RS24290 0.30 +1.2 5,439,730 - PFLU_RS24290 0.30 -2.1 5,439,730 - PFLU_RS24290 0.30 +0.7 5,439,864 + PFLU_RS24290 0.48 -1.0 5,439,864 + PFLU_RS24290 0.48 +1.2 5,439,865 - PFLU_RS24290 0.48 -1.4 5,439,865 - PFLU_RS24290 0.48 -0.8 5,439,865 - PFLU_RS24290 0.48 +0.7 5,440,021 + PFLU_RS24290 0.69 +2.2 5,440,021 + PFLU_RS24290 0.69 +0.2 5,440,022 - PFLU_RS24290 0.69 -0.8 5,440,022 - PFLU_RS24290 0.69 -1.6 5,440,059 + PFLU_RS24290 0.74 -0.8 5,440,059 + PFLU_RS24290 0.74 +0.4 5,440,059 + PFLU_RS24290 0.74 +0.2 5,440,060 - PFLU_RS24290 0.74 -0.8 5,440,074 + PFLU_RS24290 0.76 +2.7 5,440,074 + PFLU_RS24290 0.76 +1.9 5,440,074 + PFLU_RS24290 0.76 -0.8 5,440,074 + PFLU_RS24290 0.76 -0.8 5,440,075 - PFLU_RS24290 0.76 -0.1 5,440,075 - PFLU_RS24290 0.76 -2.6 5,440,075 - PFLU_RS24290 0.76 -1.1 5,440,075 - PFLU_RS24290 0.76 +1.2 5,440,075 - PFLU_RS24290 0.76 +1.0 5,440,075 - PFLU_RS24290 0.76 +1.9 5,440,075 - PFLU_RS24290 0.76 -0.7 5,440,146 + PFLU_RS24290 0.85 -1.8 5,440,146 + PFLU_RS24290 0.85 +2.0 5,440,260 + +1.4 5,440,260 + -1.4 5,440,260 + +0.8 5,440,261 - -1.3 5,440,261 - +1.4 5,440,333 - +0.6 5,440,333 - -1.1 5,440,394 - -1.8 5,440,394 - -1.6 5,440,394 - +1.2 5,440,394 - +1.5 5,440,453 + +2.0 5,440,453 + +1.2 5,440,453 + +1.5 5,440,453 + -0.6 5,440,453 + -1.1 5,440,454 - +1.2 5,440,454 - -1.3 5,440,454 - -1.7 5,440,454 - +2.3 5,440,454 - -1.0 5,440,570 + PFLU_RS24295 0.22 +2.8 5,440,571 - PFLU_RS24295 0.22 +1.1 5,440,571 - PFLU_RS24295 0.22 -1.9 5,440,571 - PFLU_RS24295 0.22 +2.4 5,440,594 + PFLU_RS24295 0.26 +0.3 5,440,594 + PFLU_RS24295 0.26 +1.7 5,440,594 + PFLU_RS24295 0.26 +1.9 5,440,594 + PFLU_RS24295 0.26 -0.6 5,440,594 + PFLU_RS24295 0.26 +0.0 5,440,594 + PFLU_RS24295 0.26 +2.0 5,440,594 + PFLU_RS24295 0.26 -0.6 5,440,594 + PFLU_RS24295 0.26 -2.3 5,440,595 - PFLU_RS24295 0.26 -1.1 5,440,595 - PFLU_RS24295 0.26 -0.1 5,440,595 - PFLU_RS24295 0.26 +2.9 5,440,595 - PFLU_RS24295 0.26 -0.5 5,440,595 - PFLU_RS24295 0.26 -2.4 5,440,595 - PFLU_RS24295 0.26 -2.0 5,440,951 + PFLU_RS24295 0.82 +0.4 5,440,951 + PFLU_RS24295 0.82 +0.6 5,441,002 + +0.1 5,441,003 - +2.4 5,441,003 - -2.5 5,441,038 + -1.0 5,441,038 + -1.7 5,441,039 - +1.7 5,441,039 - -1.0 5,441,039 - +0.7 5,441,039 - +2.4 5,441,039 - +2.6 5,441,039 - +0.0 5,441,134 - +1.2 5,441,134 - -0.6 5,441,140 + -1.1 5,441,140 + -0.3 5,441,140 + -2.3 5,441,140 - -1.4 5,441,141 - +0.6 5,441,141 - -0.6 5,441,180 + -2.7 5,441,180 + +0.4 5,441,180 + -2.9 5,441,180 + -1.0 5,441,181 - -0.8 5,441,360 + PFLU_RS24300 0.74 -0.3 5,441,361 - PFLU_RS24300 0.74 +1.6 5,441,380 + PFLU_RS24300 0.82 +0.7 5,441,380 + PFLU_RS24300 0.82 +0.8 5,441,380 + PFLU_RS24300 0.82 -0.7 5,441,381 - PFLU_RS24300 0.82 -0.8 5,441,381 - PFLU_RS24300 0.82 -0.0 5,441,381 - PFLU_RS24300 0.82 +3.3 5,441,415 + -0.8 5,441,415 + +2.6 5,441,415 + +0.3 5,441,415 + -0.6 5,441,415 + -1.9 5,441,415 + +1.0 5,441,416 - +0.8 5,441,416 - +4.7 5,441,416 - +0.4 5,441,416 - -2.3 5,441,461 - +1.0 5,441,488 + +0.7 5,441,488 + -0.3 5,441,489 - -1.3 5,441,489 - -2.7 5,441,498 - +1.3 5,441,602 + PFLU_RS24305 0.39 +0.1 5,441,602 + PFLU_RS24305 0.39 +0.4 5,441,603 - PFLU_RS24305 0.39 -0.8 5,441,603 - PFLU_RS24305 0.39 +1.0 5,441,783 + +0.4 5,441,783 + -0.9 5,441,783 + +1.9 5,441,784 - -1.8 5,441,784 - +0.0 5,441,784 - -1.4 5,441,924 - +2.9 5,441,924 - +0.1 5,441,924 - -0.3 5,441,947 + +0.6 5,441,947 + -0.2 5,441,974 - -0.0 5,441,974 - -2.1
Or see this region's nucleotide sequence