Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS15100

Experiment: p-Coumaric 2 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric 2 mM (C)
3,378,416	+		PFLU_RS15095	0.48	-1.1
3,378,446	+		PFLU_RS15095	0.50	+1.0
3,378,447	-		PFLU_RS15095	0.50	-2.1
3,378,494	+		PFLU_RS15095	0.53	-0.7
3,378,494	+		PFLU_RS15095	0.53	-0.5
3,378,495	-		PFLU_RS15095	0.54	-0.3
3,378,495	-		PFLU_RS15095	0.54	-0.2
3,378,495	-		PFLU_RS15095	0.54	-2.4
3,378,821	+		PFLU_RS15095	0.76	+1.5
3,378,843	+		PFLU_RS15095	0.78	-1.5
3,378,846	-		PFLU_RS15095	0.78	+2.5
3,378,914	+		PFLU_RS15095	0.82	+0.6
3,378,914	+		PFLU_RS15095	0.82	+0.3
3,378,915	-		PFLU_RS15095	0.83	+1.5
3,378,957	-		PFLU_RS15095	0.85	-0.5
3,378,962	-		PFLU_RS15095	0.86	-2.7
3,379,101	+				+0.5
3,379,102	-				+1.7
3,379,160	-				+0.9
3,379,170	+				-0.5
3,379,179	+				-2.5
3,379,180	-				+2.1
3,379,184	+				-1.7
3,379,184	+				-0.4
3,379,184	+				+2.1
3,379,184	+				+0.3
3,379,184	+				-1.3
3,379,185	-				-0.8
3,379,272	+				+1.5
3,379,272	+				+1.2
3,379,272	+				+0.5
3,379,273	-				+2.1
3,379,453	-				-0.0
3,379,479	+		PFLU_RS15100	0.10	+2.8
3,379,479	+		PFLU_RS15100	0.10	-0.1
3,379,479	+		PFLU_RS15100	0.10	+1.7
3,379,480	-		PFLU_RS15100	0.10	-1.5
3,379,550	+		PFLU_RS15100	0.17	+0.1
3,379,551	-		PFLU_RS15100	0.17	+0.6
3,379,579	-		PFLU_RS15100	0.20	-1.1
3,379,579	-		PFLU_RS15100	0.20	+0.3
3,379,579	-		PFLU_RS15100	0.20	+0.9
3,379,591	+		PFLU_RS15100	0.22	-1.1
3,379,851	+		PFLU_RS15100	0.48	-2.3
3,379,851	+		PFLU_RS15100	0.48	-0.8
3,379,851	+		PFLU_RS15100	0.48	+1.1
3,379,851	+		PFLU_RS15100	0.48	-0.8
3,379,852	-		PFLU_RS15100	0.49	-0.8
3,379,852	-		PFLU_RS15100	0.49	-1.1
3,379,852	-		PFLU_RS15100	0.49	-0.8
3,379,852	-		PFLU_RS15100	0.49	-1.0
3,379,852	-		PFLU_RS15100	0.49	-1.7
3,379,852	-		PFLU_RS15100	0.49	-0.1
3,379,852	-		PFLU_RS15100	0.49	+0.0
3,379,852	-		PFLU_RS15100	0.49	-3.1
3,379,852	-		PFLU_RS15100	0.49	-1.7
3,379,852	-		PFLU_RS15100	0.49	+1.5
3,380,039	-		PFLU_RS15100	0.68	-1.7
3,380,275	-				+1.8
3,380,275	-				-2.3
3,380,372	+				-1.3
3,380,415	+				+0.6
3,380,415	+				-2.0
3,380,415	+				-1.3
3,380,416	-				+0.1
3,380,420	+				-2.8
3,380,420	+				+1.5
3,380,420	+				-0.8
3,380,420	+				+3.1
3,380,421	-				-0.7
3,380,421	-				+0.4
3,380,421	-				+0.9
3,380,421	-				-0.1
3,380,439	+				+0.2
3,380,518	+				+0.1
3,380,518	+				-1.3
3,380,518	+				+0.2
3,380,518	+				+0.5
3,380,519	-				+0.5
3,380,519	-				-0.9
3,380,519	-				-2.8
3,380,522	+				-0.2
3,380,522	+				-0.1
3,380,523	-				+1.3
3,380,523	-				-0.5
3,380,523	-				-1.3
3,380,594	+				+1.6
3,380,595	-				+1.4
3,380,595	-				-1.8
3,380,681	+				-1.1
3,380,681	+				+0.2
3,380,681	+				+1.9
3,380,682	-		PFLU_RS15105	0.10	-1.3
3,380,742	+		PFLU_RS15105	0.14	-2.0
3,380,742	+		PFLU_RS15105	0.14	+2.3
3,380,742	+		PFLU_RS15105	0.14	-0.5
3,380,742	+		PFLU_RS15105	0.14	+0.7
3,380,742	+		PFLU_RS15105	0.14	+2.5
3,380,743	-		PFLU_RS15105	0.14	-2.2
3,380,743	-		PFLU_RS15105	0.14	+0.1
3,380,743	-		PFLU_RS15105	0.14	+1.0
3,380,743	-		PFLU_RS15105	0.14	+0.5
3,380,779	+		PFLU_RS15105	0.17	-0.6
3,381,130	-		PFLU_RS15105	0.43	-0.7
3,381,198	+		PFLU_RS15105	0.47	-0.5
3,381,198	+		PFLU_RS15105	0.47	-0.5
3,381,199	-		PFLU_RS15105	0.48	-1.3
3,381,216	+		PFLU_RS15105	0.49	+1.3