Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS11915

Experiment: p-Coumaric 2 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric 2 mM (C)
2,651,260	+				-0.8
2,651,260	+				+2.8
2,651,260	+				-1.5
2,651,264	+				-2.8
2,651,264	+				+0.7
2,651,303	-				+1.5
2,651,332	-				+1.2
2,651,426	-				-1.3
2,651,469	-				+0.5
2,651,630	-				+0.3
2,651,638	+				-0.3
2,651,638	+				+0.1
2,651,638	+				+0.1
2,651,638	+				+1.0
2,651,638	+				-1.9
2,651,639	-				-0.1
2,651,639	-				-1.1
2,651,639	-				+1.4
2,651,639	-				+0.4
2,651,639	-				-2.6
2,651,639	-				-0.8
2,651,639	-				-0.9
2,651,639	-				-0.8
2,651,805	+				+0.5
2,651,805	+				+1.9
2,651,806	-				+1.1
2,651,806	-				-0.3
2,651,816	-				+0.4
2,651,971	+		PFLU_RS11915	0.28	+0.3
2,651,971	+		PFLU_RS11915	0.28	-3.2
2,651,972	-		PFLU_RS11915	0.28	-0.9
2,652,157	+		PFLU_RS11915	0.59	-1.3
2,652,157	+		PFLU_RS11915	0.59	+2.0
2,652,157	+		PFLU_RS11915	0.59	+0.1
2,652,157	+		PFLU_RS11915	0.59	+1.2
2,652,157	+		PFLU_RS11915	0.59	-1.6
2,652,158	-		PFLU_RS11915	0.59	+0.4
2,652,158	-		PFLU_RS11915	0.59	-2.9
2,652,573	+				+1.6
2,652,573	+				+0.7
2,652,696	+		PFLU_RS11920	0.15	+1.0
2,652,697	-		PFLU_RS11920	0.15	+1.5
2,652,822	+		PFLU_RS11920	0.23	-0.6
2,652,822	+		PFLU_RS11920	0.23	+2.8
2,652,939	-		PFLU_RS11920	0.30	-2.1
2,653,086	+		PFLU_RS11920	0.40	+1.5
2,653,128	+		PFLU_RS11920	0.42	-0.8
2,653,129	-		PFLU_RS11920	0.42	-0.5
2,653,129	-		PFLU_RS11920	0.42	+3.4
2,653,129	-		PFLU_RS11920	0.42	-0.6
2,653,129	-		PFLU_RS11920	0.42	-1.6
2,653,305	+		PFLU_RS11920	0.53	+3.5
2,653,305	+		PFLU_RS11920	0.53	-1.1
2,653,305	+		PFLU_RS11920	0.53	-1.9
2,653,306	-		PFLU_RS11920	0.53	+1.3