Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS07400

Experiment: p-Coumaric 2 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric 2 mM (C)
1,645,233	+		PFLU_RS07395	0.40	-2.9
1,645,233	+		PFLU_RS07395	0.40	+2.0
1,645,233	+		PFLU_RS07395	0.40	-1.4
1,645,233	+		PFLU_RS07395	0.40	-0.5
1,645,233	+		PFLU_RS07395	0.40	+1.9
1,645,233	+		PFLU_RS07395	0.40	+1.8
1,645,233	+		PFLU_RS07395	0.40	+0.6
1,645,233	+		PFLU_RS07395	0.40	-1.5
1,645,233	+		PFLU_RS07395	0.40	-1.8
1,645,233	+		PFLU_RS07395	0.40	+1.5
1,645,233	+		PFLU_RS07395	0.40	-1.8
1,645,233	+		PFLU_RS07395	0.40	-0.4
1,645,234	-		PFLU_RS07395	0.41	-2.2
1,645,234	-		PFLU_RS07395	0.41	+1.8
1,645,234	-		PFLU_RS07395	0.41	-2.2
1,645,234	-		PFLU_RS07395	0.41	-0.3
1,645,234	-		PFLU_RS07395	0.41	+0.5
1,645,234	-		PFLU_RS07395	0.41	-1.2
1,645,234	-		PFLU_RS07395	0.41	+0.9
1,645,236	+		PFLU_RS07395	0.41	+0.4
1,645,236	+		PFLU_RS07395	0.41	+1.4
1,645,236	+		PFLU_RS07395	0.41	+2.1
1,645,237	-		PFLU_RS07395	0.41	-1.2
1,645,237	-		PFLU_RS07395	0.41	+3.9
1,645,237	-		PFLU_RS07395	0.41	-2.2
1,645,257	-		PFLU_RS07395	0.43	+0.4
1,645,257	-		PFLU_RS07395	0.43	+1.2
1,645,266	+		PFLU_RS07395	0.43	+0.9
1,645,266	+		PFLU_RS07395	0.43	+2.9
1,645,266	+		PFLU_RS07395	0.43	+1.1
1,645,267	-		PFLU_RS07395	0.43	+0.8
1,645,267	-		PFLU_RS07395	0.43	+1.7
1,645,267	-		PFLU_RS07395	0.43	-0.6
1,645,267	-		PFLU_RS07395	0.43	+1.7
1,645,267	-		PFLU_RS07395	0.43	-0.6
1,645,267	-		PFLU_RS07395	0.43	-1.8
1,645,387	-		PFLU_RS07395	0.53	-1.6
1,645,518	+		PFLU_RS07395	0.64	-2.1
1,645,518	+		PFLU_RS07395	0.64	+2.0
1,645,518	+		PFLU_RS07395	0.64	-1.5
1,645,518	+		PFLU_RS07395	0.64	+0.0
1,645,518	+		PFLU_RS07395	0.64	+0.5
1,645,518	+		PFLU_RS07395	0.64	-0.6
1,645,518	+		PFLU_RS07395	0.64	+2.4
1,645,518	+		PFLU_RS07395	0.64	+0.4
1,645,518	+		PFLU_RS07395	0.64	+1.9
1,645,519	-		PFLU_RS07395	0.65	-1.4
1,645,519	-		PFLU_RS07395	0.65	-1.1
1,645,519	-		PFLU_RS07395	0.65	-0.6
1,645,519	-		PFLU_RS07395	0.65	-1.5
1,645,519	-		PFLU_RS07395	0.65	-0.6
1,645,519	-		PFLU_RS07395	0.65	+2.6
1,646,009	+				-2.2
1,646,009	+				+0.2
1,646,010	-				-1.2
1,646,015	+				+1.5
1,646,015	+				+0.5
1,646,015	+				-2.9
1,646,015	+				-2.1
1,646,015	+				-1.8
1,646,015	+				-2.2
1,646,016	-				+1.4
1,646,016	-				+2.9
1,646,016	-				+0.9
1,646,020	-				+3.2
1,646,020	-				+0.3
1,646,200	+				-1.9
1,646,201	-				-0.1
1,646,228	+				+0.4
1,646,229	-				-2.1
1,646,229	-				-2.8
1,646,229	-				-1.1
1,646,229	-				-0.5
1,646,229	-				+1.7
1,646,410	+		PFLU_RS07400	0.19	-2.4
1,646,410	+		PFLU_RS07400	0.19	+1.9
1,646,411	-		PFLU_RS07400	0.19	-0.9
1,646,569	-		PFLU_RS07400	0.30	-0.1
1,646,588	+		PFLU_RS07400	0.31	+0.7
1,646,589	-		PFLU_RS07400	0.31	-1.5
1,646,620	+		PFLU_RS07400	0.33	-0.9
1,646,620	+		PFLU_RS07400	0.33	+2.1
1,646,620	+		PFLU_RS07400	0.33	+0.1
1,646,620	+		PFLU_RS07400	0.33	-2.1
1,646,620	+		PFLU_RS07400	0.33	+0.5
1,646,620	+		PFLU_RS07400	0.33	-1.1
1,646,621	-		PFLU_RS07400	0.33	-0.6
1,646,621	-		PFLU_RS07400	0.33	+1.3
1,646,621	-		PFLU_RS07400	0.33	-0.1
1,646,621	-		PFLU_RS07400	0.33	+1.4
1,647,251	+		PFLU_RS07400	0.77	+0.4
1,647,251	+		PFLU_RS07400	0.77	-1.2
1,647,251	+		PFLU_RS07400	0.77	-1.1
1,647,251	+		PFLU_RS07400	0.77	-2.1
1,647,252	-		PFLU_RS07400	0.77	-1.8
1,647,252	-		PFLU_RS07400	0.77	+1.9
1,647,252	-		PFLU_RS07400	0.77	-1.0
1,647,252	-		PFLU_RS07400	0.77	+1.2
1,647,252	-		PFLU_RS07400	0.77	-1.1
1,647,252	-		PFLU_RS07400	0.77	-1.2
1,647,252	-		PFLU_RS07400	0.77	-2.2
1,647,252	-		PFLU_RS07400	0.77	-2.9
1,647,254	+		PFLU_RS07400	0.77	-0.7
1,647,254	+		PFLU_RS07400	0.77	-2.5
1,647,254	+		PFLU_RS07400	0.77	+3.3
1,647,255	-		PFLU_RS07400	0.77	+1.6
1,647,301	+		PFLU_RS07400	0.80	-1.4
1,647,301	+		PFLU_RS07400	0.80	-1.1
1,647,302	-		PFLU_RS07400	0.80	+0.4
1,647,558	+				-0.6
1,647,558	+				-1.8
1,647,558	+				-1.1
1,647,558	+				-1.4
1,647,558	+				+0.4
1,647,558	+				+1.2
1,647,558	+				-2.3
1,647,558	+				-0.9
1,647,558	+				+1.9
1,647,558	+				-0.1
1,647,558	+				+2.4
1,647,558	+				+1.7
1,647,559	-				-0.4
1,647,559	-				-2.4
1,647,559	-				+0.7
1,647,559	-				+1.0
1,647,559	-				+1.2
1,647,559	-				+1.1
1,647,559	-				-0.4
1,647,559	-				+1.7
1,647,559	-				+0.4
1,647,559	-				+1.9
1,647,560	+				+0.7
1,647,560	+				+0.1
1,647,560	+				+1.4
1,647,560	+				+2.0
1,647,560	+				+1.4
1,647,560	+				+1.1
1,647,560	+				-1.1
1,647,560	+				+0.5
1,647,560	+				-1.6
1,647,560	+				-3.2
1,647,560	+				+3.0
1,647,560	+				+1.9
1,647,560	+				-2.3
1,647,560	+				+0.8
1,647,560	+				-0.1
1,647,560	+				-1.1
1,647,560	+				+2.3
1,647,560	+				-2.8
1,647,560	+				+1.1
1,647,560	+				+2.8
1,647,560	+				+1.2
1,647,560	+				-0.3
1,647,560	+				+2.1
1,647,560	+				+2.1
1,647,560	+				+0.4
1,647,560	+				+1.4
1,647,560	+				-1.2
1,647,560	+				-0.9
1,647,561	-				+2.2
1,647,561	-				+1.9
1,647,561	-				-1.6
1,647,561	-				+2.2
1,647,561	-				-1.1
1,647,561	-				-1.7
1,647,561	-				+2.9
1,647,561	-				-1.6
1,647,561	-				-0.1
1,647,561	-				+0.6
1,647,561	-				+0.1
1,647,561	-				-2.2
1,647,561	-				-2.8
1,647,561	-				+2.6
1,647,561	-				+1.8
1,647,561	-				+3.1
1,647,561	-				-0.1
1,647,561	-				-2.9
1,647,561	-				+0.5
1,647,561	-				+2.9
1,647,561	-				-1.6
1,647,561	-				-0.4
1,647,561	-				+1.6
1,647,561	-				+1.8
1,647,561	-				+1.3
1,647,561	-				-0.1
1,647,561	-				-0.8
1,647,561	-				-0.1
1,647,561	-				+0.2
1,647,561	-				+2.1
1,647,561	-				+1.2
1,647,561	-				-0.3
1,647,561	-				+1.1
1,647,745	+		PFLU_RS07405	0.10	+2.2
1,647,745	+		PFLU_RS07405	0.10	-1.4
1,647,745	+		PFLU_RS07405	0.10	+2.3
1,647,745	+		PFLU_RS07405	0.10	+2.7
1,647,745	+		PFLU_RS07405	0.10	+0.1
1,647,745	+		PFLU_RS07405	0.10	-1.5
1,647,745	+		PFLU_RS07405	0.10	-2.1
1,647,745	+		PFLU_RS07405	0.10	-1.6
1,647,745	+		PFLU_RS07405	0.10	-1.1
1,647,746	-		PFLU_RS07405	0.10	+0.3
1,647,746	-		PFLU_RS07405	0.10	+0.9
1,647,746	-		PFLU_RS07405	0.10	+0.2
1,647,746	-		PFLU_RS07405	0.10	-1.6
1,647,746	-		PFLU_RS07405	0.10	-1.2
1,647,746	-		PFLU_RS07405	0.10	+0.9
1,647,746	-		PFLU_RS07405	0.10	+1.4
1,647,746	-		PFLU_RS07405	0.10	-0.1
1,647,746	-		PFLU_RS07405	0.10	+1.5
1,647,746	-		PFLU_RS07405	0.10	-0.1
1,647,746	-		PFLU_RS07405	0.10	-1.2
1,647,746	-		PFLU_RS07405	0.10	-0.6
1,647,746	-		PFLU_RS07405	0.10	+0.1
1,647,746	-		PFLU_RS07405	0.10	+2.1
1,647,746	-		PFLU_RS07405	0.10	+3.0
1,647,787	+		PFLU_RS07405	0.13	+0.9
1,647,787	+		PFLU_RS07405	0.13	+1.4
1,647,787	+		PFLU_RS07405	0.13	+0.9
1,647,787	+		PFLU_RS07405	0.13	+0.4
1,647,787	+		PFLU_RS07405	0.13	+1.5
1,647,787	+		PFLU_RS07405	0.13	-1.2
1,647,787	+		PFLU_RS07405	0.13	-0.9
1,647,787	+		PFLU_RS07405	0.13	+1.3
1,647,788	-		PFLU_RS07405	0.13	-0.6
1,647,788	-		PFLU_RS07405	0.13	-1.4
1,647,788	-		PFLU_RS07405	0.13	+0.1
1,647,788	-		PFLU_RS07405	0.13	-2.0
1,647,788	-		PFLU_RS07405	0.13	-2.1
1,647,788	-		PFLU_RS07405	0.13	-0.5
1,647,788	-		PFLU_RS07405	0.13	+0.9
1,647,788	-		PFLU_RS07405	0.13	+2.7
1,647,805	+		PFLU_RS07405	0.14	-0.6
1,647,805	+		PFLU_RS07405	0.14	+1.1
1,647,805	+		PFLU_RS07405	0.14	+2.4
1,647,806	-		PFLU_RS07405	0.14	+4.3
1,647,816	-		PFLU_RS07405	0.14	+0.6
1,647,816	-		PFLU_RS07405	0.14	+0.1
1,647,968	-		PFLU_RS07405	0.24	+0.4
1,648,045	+		PFLU_RS07405	0.28	-1.4
1,648,045	+		PFLU_RS07405	0.28	-2.3
1,648,045	+		PFLU_RS07405	0.28	-1.4
1,648,045	+		PFLU_RS07405	0.28	+2.9
1,648,046	-		PFLU_RS07405	0.29	-1.2
1,648,046	-		PFLU_RS07405	0.29	+0.9
1,648,046	-		PFLU_RS07405	0.29	-2.4
1,648,046	-		PFLU_RS07405	0.29	-0.6
1,648,046	-		PFLU_RS07405	0.29	+0.5
1,648,046	-		PFLU_RS07405	0.29	-1.2
1,648,046	-		PFLU_RS07405	0.29	+0.4
1,648,289	-		PFLU_RS07405	0.43	+0.9
1,648,372	+		PFLU_RS07405	0.49	-0.4
1,648,373	-		PFLU_RS07405	0.49	+0.8