Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS30555

Experiment: L-Valine 10 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Valine 10 mM (C)
2,063,385	+				-0.3
2,063,385	+				-0.1
2,063,385	+				-1.3
2,063,385	+				-0.7
2,063,385	+				+0.3
2,063,385	+				-0.7
2,063,385	+				-1.1
2,063,385	+				+4.1
2,063,385	+				+0.3
2,063,385	+				+1.0
2,063,385	+				+0.6
2,063,385	+				-0.6
2,063,385	+				-0.5
2,063,385	+				-0.6
2,063,385	+				+0.7
2,063,385	+				+0.3
2,063,385	+				+1.9
2,063,385	+				-0.7
2,063,385	+				+0.9
2,063,385	+				+1.1
2,063,385	+				-1.0
2,063,385	+				+0.3
2,063,385	+				-0.7
2,063,385	+				+1.2
2,063,385	+				+0.0
2,063,386	-				-1.8
2,063,386	-				-1.0
2,063,386	-				-2.0
2,063,386	-				-1.1
2,063,386	-				-1.0
2,063,386	-				-0.9
2,063,386	-				+2.6
2,063,386	-				-1.1
2,063,386	-				-0.2
2,063,386	-				-2.6
2,063,386	-				-1.1
2,063,386	-				-0.1
2,063,386	-				+1.0
2,063,386	-				+3.2
2,063,386	-				-0.6
2,063,386	-				-0.9
2,063,386	-				-0.6
2,063,386	-				-0.7
2,063,386	-				-0.1
2,063,386	-				-1.0
2,063,386	-				+0.9
2,063,399	+				-2.1
2,063,399	+				-2.7
2,063,399	+				-2.4
2,063,399	+				+2.3
2,063,399	+				-0.5
2,063,399	+				-2.5
2,063,400	-				-1.7
2,063,402	+				-0.8
2,063,402	+				+1.4
2,063,403	-				+0.0
2,063,403	-				-0.5
2,063,403	-				-0.8
2,063,403	-				+2.2
2,063,403	-				+3.3
2,063,403	-				-0.8
2,063,403	-				+3.2
2,063,445	+				+1.7
2,063,460	+				-0.2
2,063,460	+				-2.2
2,063,460	+				-0.1
2,063,460	+				+0.3
2,063,460	+				-1.2
2,063,460	+				+2.3
2,063,460	+				-2.2
2,063,460	+				+1.3
2,063,461	-				-0.6
2,063,461	-				+0.1
2,063,461	-				-1.4
2,063,461	-				-0.1
2,063,461	-				-1.5
2,063,494	+				+0.9
2,063,495	-				+0.2
2,063,495	-				+0.3
2,063,555	+		PFLU_RS09325	0.17	-0.1
2,063,555	+		PFLU_RS09325	0.17	+1.9
2,063,574	+		PFLU_RS09325	0.19	+0.3
2,063,574	+		PFLU_RS09325	0.19	-2.2
2,063,574	+		PFLU_RS09325	0.19	+0.3
2,063,609	+		PFLU_RS09325	0.24	+0.6
2,063,609	+		PFLU_RS09325	0.24	-2.0
2,063,645	+		PFLU_RS09325	0.29	+0.4
2,063,646	-		PFLU_RS09325	0.29	+0.9
2,063,646	-		PFLU_RS09325	0.29	-0.1
2,063,646	-		PFLU_RS09325	0.29	-0.8
2,063,678	+		PFLU_RS09325	0.33	-2.0
2,063,678	+		PFLU_RS09325	0.33	-0.5
2,063,678	+		PFLU_RS09325	0.33	-0.1
2,063,678	+		PFLU_RS09325	0.33	+0.2
2,063,678	+		PFLU_RS09325	0.33	+0.7
2,063,678	+		PFLU_RS09325	0.33	-1.3
2,063,678	+		PFLU_RS09325	0.33	+1.0
2,063,678	+		PFLU_RS09325	0.33	-2.1
2,063,679	-		PFLU_RS09325	0.33	+0.3
2,063,679	-		PFLU_RS09325	0.33	+2.5
2,063,679	-		PFLU_RS09325	0.33	+0.3
2,063,679	-		PFLU_RS09325	0.33	-0.8
2,063,679	-		PFLU_RS09325	0.33	-0.3
2,063,679	-		PFLU_RS09325	0.33	-1.1
2,063,679	-		PFLU_RS09325	0.33	-1.1
2,063,688	+		PFLU_RS09325	0.35	-1.5
2,063,689	-		PFLU_RS09325	0.35	+0.5
2,063,689	-		PFLU_RS09325	0.35	+0.3
2,063,689	-		PFLU_RS09325	0.35	-0.4
2,063,827	+		PFLU_RS09325	0.53	+2.1
2,063,869	+		PFLU_RS09325	0.59	+3.4
2,063,870	-		PFLU_RS09325	0.59	-2.5
2,063,870	-		PFLU_RS09325	0.59	-1.3
2,063,890	-		PFLU_RS09325	0.62	+1.9
2,063,894	+		PFLU_RS09325	0.62	-1.0
2,063,894	+		PFLU_RS09325	0.62	-1.1
2,063,894	+		PFLU_RS09325	0.62	+0.7
2,063,894	+		PFLU_RS09325	0.62	+1.1
2,063,894	+		PFLU_RS09325	0.62	-0.1
2,063,895	-		PFLU_RS09325	0.62	-0.6
2,063,895	-		PFLU_RS09325	0.62	-0.0
2,063,895	-		PFLU_RS09325	0.62	-0.5
2,063,895	-		PFLU_RS09325	0.62	-1.5
2,063,895	-		PFLU_RS09325	0.62	+0.3
2,063,895	-		PFLU_RS09325	0.62	+0.1
2,063,895	-		PFLU_RS09325	0.62	+0.5
2,063,895	-		PFLU_RS09325	0.62	+1.1
2,063,895	-		PFLU_RS09325	0.62	-1.3
2,063,921	+		PFLU_RS09325	0.66	+0.3
2,063,922	-		PFLU_RS09325	0.66	+1.2
2,063,922	-		PFLU_RS09325	0.66	-0.1
2,063,924	+		PFLU_RS09325	0.66	+0.4
2,063,925	-		PFLU_RS09325	0.66	-0.3
2,063,925	-		PFLU_RS09325	0.66	-0.7
2,063,925	-		PFLU_RS09325	0.66	+1.9
2,063,925	-		PFLU_RS09325	0.66	+1.7
2,063,925	-		PFLU_RS09325	0.66	-0.7
2,063,930	+		PFLU_RS09325	0.67	+4.0
2,063,930	+		PFLU_RS09325	0.67	+0.8
2,063,930	+		PFLU_RS09325	0.67	+0.0
2,063,930	+		PFLU_RS09325	0.67	-2.1
2,063,930	+		PFLU_RS09325	0.67	-0.5
2,063,930	+		PFLU_RS09325	0.67	-0.5
2,063,930	+		PFLU_RS09325	0.67	-0.7
2,063,930	+		PFLU_RS09325	0.67	-0.9
2,063,930	+		PFLU_RS09325	0.67	+1.0
2,063,930	+		PFLU_RS09325	0.67	+1.4
2,063,931	-		PFLU_RS09325	0.67	+0.4
2,063,931	-		PFLU_RS09325	0.67	+1.2
2,063,931	-		PFLU_RS09325	0.67	-0.1
2,063,931	-		PFLU_RS09325	0.67	+3.1
2,063,931	-		PFLU_RS09325	0.67	-2.0
2,063,931	-		PFLU_RS09325	0.67	+1.6
2,063,931	-		PFLU_RS09325	0.67	-2.7
2,063,931	-		PFLU_RS09325	0.67	-1.6
2,063,931	-		PFLU_RS09325	0.67	-1.6
2,063,931	-		PFLU_RS09325	0.67	+1.9
2,063,931	-		PFLU_RS09325	0.67	-1.1
2,063,931	-		PFLU_RS09325	0.67	+1.5
2,063,931	-		PFLU_RS09325	0.67	-1.8
2,063,931	-		PFLU_RS09325	0.67	-1.6
2,063,931	-		PFLU_RS09325	0.67	-0.5
2,064,024	+		PFLU_RS09325	0.79	+0.4
2,064,024	+		PFLU_RS09325	0.79	-1.7
2,064,024	+		PFLU_RS09325	0.79	-0.3
2,064,035	-		PFLU_RS09325	0.81	+0.0
2,064,040	-		PFLU_RS09325	0.82	-2.2
2,064,052	+		PFLU_RS09325	0.83	-0.1
2,064,053	-		PFLU_RS09325	0.83	+0.4
2,064,053	-		PFLU_RS09325	0.83	+0.3
2,064,053	-		PFLU_RS09325	0.83	-0.7
2,064,100	-		PFLU_RS09325	0.90	-1.1
2,064,121	-				+0.9
2,064,122	+				+0.3
2,064,122	+				-1.1
2,064,123	-				-0.6
2,064,123	-				-1.5
2,064,123	-				+0.3
2,064,123	-				+1.3
2,064,123	-				+0.2
2,064,123	-				+0.9
2,064,176	-				-0.9
2,064,190	-				+0.6
2,064,204	+				-1.1
2,064,204	+				-0.9
2,064,205	-				-0.9
2,064,279	-				+1.0
2,064,279	-				+0.3
2,064,281	-				-1.3
2,064,293	+				-1.0
2,064,306	-				-1.3
2,064,324	+				+1.9
2,064,325	-				-0.5
2,064,355	+				-2.2
2,064,355	+				-2.2
2,064,358	+				-0.8
2,064,358	+				-2.3
2,064,359	-				-0.5
2,064,378	-				-0.8
2,064,378	-				-1.9
2,064,383	+				-0.7
2,064,387	+				+2.3
2,064,436	+		PFLU_RS30555	0.75	-1.3
2,064,436	+		PFLU_RS30555	0.75	+1.2
2,064,436	+		PFLU_RS30555	0.75	-2.9
2,064,437	-		PFLU_RS30555	0.76	-1.3
2,064,453	+				+0.6
2,064,490	+				+0.3
2,064,490	+				-1.3
2,064,491	-				-0.7
2,064,491	-				+2.7
2,064,511	+				-0.2
2,064,512	-				+2.2
2,064,512	-				+1.9
2,064,512	-				+1.2
2,064,568	+				+0.5
2,064,568	+				+0.9
2,064,575	+				-2.1
2,064,575	+				+0.6
2,064,575	+				+1.0
2,064,575	+				-1.1
2,064,576	-				-0.1
2,064,579	+				+1.3
2,064,580	-				-1.9
2,064,588	-				-1.1
2,064,588	-				-0.5
2,064,621	+				-1.1
2,064,630	-				-0.2
2,064,630	-				+0.9
2,064,630	-				-1.1
2,064,633	+				-0.3
2,064,633	+				-0.7
2,064,650	-				-0.3
2,064,689	-		PFLU_RS09330	0.13	+1.3
2,064,703	+		PFLU_RS09330	0.16	-0.3
2,064,703	+		PFLU_RS09330	0.16	+0.8
2,064,704	-		PFLU_RS09330	0.17	-2.7
2,064,704	-		PFLU_RS09330	0.17	+1.2
2,064,720	+		PFLU_RS09330	0.21	+0.1
2,064,720	+		PFLU_RS09330	0.21	+1.9
2,064,738	+		PFLU_RS09330	0.25	+0.5
2,064,738	+		PFLU_RS09330	0.25	+1.5
2,064,738	+		PFLU_RS09330	0.25	-1.3
2,064,738	+		PFLU_RS09330	0.25	-0.9
2,064,739	-		PFLU_RS09330	0.26	-1.5
2,064,739	-		PFLU_RS09330	0.26	+0.5
2,064,739	-		PFLU_RS09330	0.26	-1.1
2,064,780	+		PFLU_RS09330	0.36	-1.6
2,064,780	+		PFLU_RS09330	0.36	+1.3
2,064,780	+		PFLU_RS09330	0.36	-0.1
2,064,781	-		PFLU_RS09330	0.37	-2.1
2,064,885	+		PFLU_RS09330	0.64	+0.3
2,064,885	+		PFLU_RS09330	0.64	-0.7
2,064,886	-		PFLU_RS09330	0.64	-0.1
2,064,886	-		PFLU_RS09330	0.64	+1.0
2,064,908	+		PFLU_RS09330	0.70	+2.2
2,064,908	+		PFLU_RS09330	0.70	+0.1
2,064,909	-		PFLU_RS09330	0.70	-0.5
2,064,914	+		PFLU_RS09330	0.72	-1.6
2,064,914	+		PFLU_RS09330	0.72	+0.1
2,064,914	+		PFLU_RS09330	0.72	+0.9
2,064,974	+		PFLU_RS09330	0.87	-1.7
2,064,974	+		PFLU_RS09330	0.87	-0.1
2,064,974	+		PFLU_RS09330	0.87	-1.7
2,064,974	+		PFLU_RS09330	0.87	-1.9
2,064,974	+		PFLU_RS09330	0.87	-0.1
2,064,975	-		PFLU_RS09330	0.88	+0.4
2,064,975	-		PFLU_RS09330	0.88	-1.9
2,064,975	-		PFLU_RS09330	0.88	-1.9
2,065,021	+				-2.4
2,065,021	+				-0.3
2,065,021	+				+0.5
2,065,021	+				+0.4
2,065,022	-				+2.0
2,065,022	-				-0.8
2,065,022	-				+1.3
2,065,022	-				-1.5
2,065,022	-				+2.7
2,065,025	+				-2.2
2,065,025	+				-1.7
2,065,026	-				-1.8
2,065,026	-				+2.8
2,065,026	-				-2.1
2,065,026	-				-1.5
2,065,074	+				-1.9
2,065,075	-				-1.2
2,065,077	+				-1.5
2,065,077	+				+2.4
2,065,092	+				+1.3
2,065,092	+				-1.5
2,065,113	+				-0.6
2,065,126	+				+0.3
2,065,141	+				-1.8
2,065,141	+				+1.0
2,065,141	+				+0.4
2,065,142	-				+1.0
2,065,142	-				-0.4
2,065,144	+				-1.1
2,065,197	+		PFLU_RS09335	0.28	-0.1
2,065,197	+		PFLU_RS09335	0.28	-0.3
2,065,197	+		PFLU_RS09335	0.28	+0.7
2,065,197	+		PFLU_RS09335	0.28	-0.7
2,065,197	+		PFLU_RS09335	0.28	+1.4
2,065,197	+		PFLU_RS09335	0.28	+0.9
2,065,198	-		PFLU_RS09335	0.28	-0.9
2,065,198	-		PFLU_RS09335	0.28	-1.1
2,065,198	-		PFLU_RS09335	0.28	-1.9
2,065,198	-		PFLU_RS09335	0.28	-1.3
2,065,198	-		PFLU_RS09335	0.28	-0.9
2,065,284	+		PFLU_RS09335	0.72	+0.7
2,065,284	+		PFLU_RS09335	0.72	+0.1
2,065,284	+		PFLU_RS09335	0.72	-1.9
2,065,284	+		PFLU_RS09335	0.72	-1.8
2,065,284	+		PFLU_RS09335	0.72	-2.2
2,065,284	+		PFLU_RS09335	0.72	+0.6
2,065,285	-		PFLU_RS09335	0.73	-0.5
2,065,320	+				-0.1
2,065,320	+				+1.4
2,065,321	-				+1.0
2,065,321	-				-0.8
2,065,321	-				+1.2
2,065,321	-				+0.4
2,065,321	-				-2.3
2,065,321	-				-0.5
2,065,321	-				-0.0
2,065,321	-				+4.1
2,065,355	+				-0.1
2,065,355	+				-0.6
2,065,356	-				-0.8
2,065,356	-				+0.0
2,065,356	-				+1.4
2,065,363	+				-1.3
2,065,363	+				+3.2
2,065,363	+				+1.4
2,065,363	+				+2.7
2,065,364	-				-1.2
2,065,364	-				-1.0
2,065,364	-				+2.0
2,065,364	-				-0.8
2,065,364	-				+0.7
2,065,364	-				+1.2
2,065,364	-				+1.4
2,065,365	+				+2.8
2,065,365	+				-1.2
2,065,365	+				+0.4
2,065,365	+				+0.2
2,065,366	-				+3.5
2,065,366	-				+0.3
2,065,366	-				-0.5
2,065,366	-				+0.3
2,065,366	-				-0.1
2,065,366	-				+1.6
2,065,370	+				+1.3
2,065,378	+				+1.5
2,065,378	+				+0.3
2,065,378	+				-0.6
2,065,378	+				+3.0
2,065,379	-				-2.0
2,065,379	-				+0.3
2,065,379	-				+2.0
2,065,382	+				+3.0
2,065,382	+				-1.1
2,065,382	+				-2.5
2,065,382	+				+0.9
2,065,382	+				+0.3
2,065,383	-				-0.5
2,065,383	-				+1.4
2,065,383	-				-0.8
2,065,383	-				-0.1
2,065,383	-				+3.2
2,065,383	-				+0.1
2,065,386	+				+1.7
2,065,386	+				+0.7
2,065,386	+				+0.3
2,065,386	+				-0.1
2,065,386	+				-1.3
2,065,386	+				-1.1
2,065,386	+				-0.1
2,065,386	+				-2.1
2,065,386	+				-1.7
2,065,386	+				+1.0
2,065,387	-				+1.1
2,065,387	-				+0.3
2,065,387	-				-1.6
2,065,387	-				-1.0
2,065,387	-				+2.0
2,065,387	-				+4.6
2,065,387	-				-0.0
2,065,387	-				+1.0
2,065,387	-				-2.1
2,065,446	+				+1.9
2,065,446	+				-1.6
2,065,446	+				+1.9
2,065,447	-				-3.4
2,065,447	-				+1.4
2,065,447	-				+0.9