Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS21855

Experiment: L-Valine 10 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Valine 10 mM (C)
4,920,301	+		PFLU_RS21845	0.80	-0.7
4,920,378	+		PFLU_RS21845	0.87	-3.6
4,920,536	+				-2.4
4,920,536	+				-0.8
4,920,536	+				-1.6
4,920,536	+				-3.1
4,920,536	+				-1.3
4,920,537	-				-0.1
4,920,537	-				-1.1
4,920,537	-				-0.1
4,920,537	-				-1.1
4,920,537	-				+2.4
4,920,537	-				+4.5
4,920,556	-				-2.1
4,920,609	+		PFLU_RS21850	0.11	-2.0
4,920,617	+		PFLU_RS21850	0.12	-4.1
4,920,617	+		PFLU_RS21850	0.12	-0.3
4,920,618	-		PFLU_RS21850	0.12	-2.9
4,920,618	-		PFLU_RS21850	0.12	-2.7
4,920,621	+		PFLU_RS21850	0.12	-2.8
4,920,621	+		PFLU_RS21850	0.12	-2.7
4,920,621	+		PFLU_RS21850	0.12	-0.7
4,920,622	-		PFLU_RS21850	0.12	-1.6
4,920,622	-		PFLU_RS21850	0.12	-2.3
4,920,657	+		PFLU_RS21850	0.18	-4.1
4,920,657	+		PFLU_RS21850	0.18	-2.4
4,920,658	-		PFLU_RS21850	0.18	-1.0
4,920,658	-		PFLU_RS21850	0.18	-1.7
4,920,723	+		PFLU_RS21850	0.27	-1.0
4,920,769	+		PFLU_RS21850	0.34	-4.2
4,920,770	-		PFLU_RS21850	0.34	+0.2
4,920,772	+		PFLU_RS21850	0.34	-3.6
4,920,772	+		PFLU_RS21850	0.34	-2.7
4,920,772	+		PFLU_RS21850	0.34	-2.1
4,920,772	+		PFLU_RS21850	0.34	-1.3
4,920,772	+		PFLU_RS21850	0.34	+2.4
4,920,772	+		PFLU_RS21850	0.34	-3.0
4,920,772	+		PFLU_RS21850	0.34	-1.8
4,920,772	+		PFLU_RS21850	0.34	-2.5
4,920,772	+		PFLU_RS21850	0.34	-1.3
4,920,772	+		PFLU_RS21850	0.34	-3.1
4,920,772	+		PFLU_RS21850	0.34	-0.6
4,920,772	+		PFLU_RS21850	0.34	-2.3
4,920,772	+		PFLU_RS21850	0.34	-2.9
4,920,772	+		PFLU_RS21850	0.34	-3.3
4,920,772	+		PFLU_RS21850	0.34	-3.9
4,920,772	+		PFLU_RS21850	0.34	-4.2
4,920,772	+		PFLU_RS21850	0.34	-2.5
4,920,772	+		PFLU_RS21850	0.34	-2.9
4,920,772	+		PFLU_RS21850	0.34	-1.8
4,920,772	+		PFLU_RS21850	0.34	-1.4
4,920,772	+		PFLU_RS21850	0.34	-1.3
4,920,772	+		PFLU_RS21850	0.34	-3.6
4,920,772	+		PFLU_RS21850	0.34	-3.9
4,920,772	+		PFLU_RS21850	0.34	-2.3
4,920,772	+		PFLU_RS21850	0.34	-3.2
4,920,773	-		PFLU_RS21850	0.34	-2.3
4,920,773	-		PFLU_RS21850	0.34	-1.3
4,920,773	-		PFLU_RS21850	0.34	-0.7
4,920,773	-		PFLU_RS21850	0.34	-2.0
4,920,773	-		PFLU_RS21850	0.34	-2.9
4,920,773	-		PFLU_RS21850	0.34	-3.4
4,920,773	-		PFLU_RS21850	0.34	-3.1
4,920,773	-		PFLU_RS21850	0.34	-3.7
4,920,773	-		PFLU_RS21850	0.34	-1.0
4,920,773	-		PFLU_RS21850	0.34	-2.0
4,920,773	-		PFLU_RS21850	0.34	-4.1
4,920,773	-		PFLU_RS21850	0.34	-2.7
4,920,773	-		PFLU_RS21850	0.34	-3.5
4,920,860	+		PFLU_RS21850	0.47	-1.3
4,920,860	+		PFLU_RS21850	0.47	-1.9
4,920,861	-		PFLU_RS21850	0.47	-2.5
4,920,861	-		PFLU_RS21850	0.47	-2.3
4,921,055	+		PFLU_RS21850	0.75	-2.7
4,921,056	-		PFLU_RS21850	0.75	-0.5
4,921,056	-		PFLU_RS21850	0.75	-3.3
4,921,056	-		PFLU_RS21850	0.75	-1.8
4,921,082	+		PFLU_RS21850	0.79	-2.1
4,921,082	+		PFLU_RS21850	0.79	-1.6
4,921,082	+		PFLU_RS21850	0.79	-2.7
4,921,082	+		PFLU_RS21850	0.79	-2.8
4,921,083	-		PFLU_RS21850	0.79	-4.1
4,921,083	-		PFLU_RS21850	0.79	-1.6
4,921,139	+		PFLU_RS21850	0.87	-1.9
4,921,139	+		PFLU_RS21850	0.87	-2.7
4,921,139	+		PFLU_RS21850	0.87	-3.5
4,921,139	+		PFLU_RS21850	0.87	-3.4
4,921,139	+		PFLU_RS21850	0.87	-3.4
4,921,139	+		PFLU_RS21850	0.87	-2.8
4,921,139	+		PFLU_RS21850	0.87	-2.6
4,921,139	+		PFLU_RS21850	0.87	+0.4
4,921,140	-		PFLU_RS21850	0.87	-4.8
4,921,142	+		PFLU_RS21850	0.87	-1.7
4,921,142	+		PFLU_RS21850	0.87	-0.6
4,921,142	+		PFLU_RS21850	0.87	-0.1
4,921,143	-		PFLU_RS21850	0.87	-1.5
4,921,143	-		PFLU_RS21850	0.87	-3.4
4,921,143	-		PFLU_RS21850	0.87	-1.5
4,921,221	-				-1.3
4,921,221	-				-1.0
4,921,221	-				-3.2
4,921,221	-				-4.1
4,921,221	-				+0.4
4,921,221	-				+1.5
4,921,237	+				-0.9
4,921,238	-				-1.4
4,921,238	-				-1.5
4,921,238	-				-3.5
4,921,283	+				-0.6
4,921,283	+				-1.8
4,921,284	-				-1.1
4,921,298	-				-4.4
4,921,349	+				-1.5
4,921,349	+				-2.4
4,921,350	-				-3.0
4,921,350	-				-1.6
4,921,362	+		PFLU_RS21855	0.10	-3.1
4,921,362	+		PFLU_RS21855	0.10	-2.3
4,921,504	-		PFLU_RS21855	0.28	-1.6
4,921,713	+		PFLU_RS21855	0.55	-2.4
4,921,713	+		PFLU_RS21855	0.55	-1.9
4,921,713	+		PFLU_RS21855	0.55	-1.4
4,921,714	-		PFLU_RS21855	0.55	-1.7
4,921,727	+		PFLU_RS21855	0.57	+0.5
4,921,727	+		PFLU_RS21855	0.57	-1.5
4,921,727	+		PFLU_RS21855	0.57	-2.5
4,921,728	-		PFLU_RS21855	0.57	-3.0
4,921,728	-		PFLU_RS21855	0.57	-2.1
4,921,728	-		PFLU_RS21855	0.57	-2.9
4,921,734	+		PFLU_RS21855	0.58	-0.3
4,921,734	+		PFLU_RS21855	0.58	-2.3
4,921,734	+		PFLU_RS21855	0.58	-3.7
4,921,734	+		PFLU_RS21855	0.58	-1.3
4,921,734	+		PFLU_RS21855	0.58	-2.2
4,921,735	-		PFLU_RS21855	0.58	+0.1
4,921,735	-		PFLU_RS21855	0.58	-4.1
4,921,735	-		PFLU_RS21855	0.58	-3.6
4,921,735	-		PFLU_RS21855	0.58	-3.1
4,921,735	-		PFLU_RS21855	0.58	-3.0
4,921,735	-		PFLU_RS21855	0.58	-1.8
4,921,735	-		PFLU_RS21855	0.58	-1.2
4,921,931	+		PFLU_RS21855	0.83	-1.7
4,921,931	+		PFLU_RS21855	0.83	-1.5
4,921,932	-		PFLU_RS21855	0.83	-4.3
4,921,932	-		PFLU_RS21855	0.83	-3.0
4,921,932	-		PFLU_RS21855	0.83	+1.2
4,921,932	-		PFLU_RS21855	0.83	-1.1
4,921,981	+		PFLU_RS21855	0.89	-3.6
4,921,981	+		PFLU_RS21855	0.89	-1.0
4,921,981	+		PFLU_RS21855	0.89	-4.1
4,921,981	+		PFLU_RS21855	0.89	-2.5
4,921,981	+		PFLU_RS21855	0.89	-3.4
4,921,981	+		PFLU_RS21855	0.89	-2.9
4,921,982	-		PFLU_RS21855	0.89	-0.1
4,921,982	-		PFLU_RS21855	0.89	-3.4
4,921,982	-		PFLU_RS21855	0.89	-4.5
4,921,982	-		PFLU_RS21855	0.89	+0.0
4,921,982	-		PFLU_RS21855	0.89	-0.3
4,922,054	-				-3.0
4,922,054	-				-2.7
4,922,054	-				-0.9
4,922,054	-				-1.6
4,922,113	+				+0.0
4,922,113	+				-2.1
4,922,113	+				-3.1
4,922,113	+				-2.4
4,922,114	-				-0.6
4,922,114	-				+1.9
4,922,114	-				+1.5
4,922,114	-				-1.8
4,922,114	-				+1.0
4,922,114	-				+0.9
4,922,117	+				-3.9
4,922,117	+				-2.0
4,922,118	-				+0.9
4,922,118	-				+0.5
4,922,351	+		PFLU_RS21860	0.30	-2.6
4,922,351	+		PFLU_RS21860	0.30	-3.2
4,922,351	+		PFLU_RS21860	0.30	-2.6
4,922,351	+		PFLU_RS21860	0.30	-0.6
4,922,352	-		PFLU_RS21860	0.30	-0.3
4,922,352	-		PFLU_RS21860	0.30	-0.6
4,922,352	-		PFLU_RS21860	0.30	-3.2
4,922,352	-		PFLU_RS21860	0.30	-2.3
4,922,352	-		PFLU_RS21860	0.30	-3.8
4,922,352	-		PFLU_RS21860	0.30	-0.4
4,922,352	-		PFLU_RS21860	0.30	-2.4
4,922,575	+		PFLU_RS21860	0.60	-2.0
4,922,575	+		PFLU_RS21860	0.60	-1.8
4,922,575	+		PFLU_RS21860	0.60	-2.1
4,922,575	+		PFLU_RS21860	0.60	-3.1
4,922,575	+		PFLU_RS21860	0.60	-3.1
4,922,576	-		PFLU_RS21860	0.60	-2.8
4,922,576	-		PFLU_RS21860	0.60	-2.0
4,922,576	-		PFLU_RS21860	0.60	-2.4
4,922,576	-		PFLU_RS21860	0.60	-1.1
4,922,576	-		PFLU_RS21860	0.60	-3.3
4,922,576	-		PFLU_RS21860	0.60	-2.7
4,922,854	+				-2.9
4,922,854	+				-0.2
4,922,854	+				-2.5
4,922,854	+				-2.0
4,922,854	+				-3.1
4,922,854	+				-2.2
4,922,854	+				+0.9
4,922,854	+				+0.1
4,922,854	+				-4.2
4,922,854	+				-1.7
4,922,854	+				-1.4
4,922,854	+				-3.5
4,922,854	+				-4.1
4,922,854	+				-2.4
4,922,854	+				-2.0
4,922,854	+				-1.7
4,922,854	+				-3.1
4,922,854	+				+0.0
4,922,854	+				-3.7
4,922,855	-				-2.1
4,922,855	-				-2.8
4,922,855	-				-4.0
4,922,855	-				-1.1
4,922,855	-				-2.1
4,922,855	-				-1.6
4,922,855	-				-3.3
4,922,855	-				-1.5
4,922,855	-				+0.9
4,922,855	-				-0.1
4,922,855	-				-2.4
4,922,855	-				-3.1
4,922,860	+				-1.5
4,922,860	+				-3.5
4,922,860	+				-0.6
4,922,860	+				-1.3
4,922,860	+				-1.0
4,922,860	+				-1.2
4,922,860	+				-2.7
4,922,860	+				-1.8
4,922,860	+				-1.8
4,922,860	+				-2.9
4,922,860	+				-2.0
4,922,860	+				-1.4
4,922,860	+				-2.7
4,922,860	+				-1.0
4,922,860	+				-1.5
4,922,860	+				-1.6
4,922,860	+				-3.3
4,922,860	+				-0.8
4,922,860	+				-3.9
4,922,860	+				+0.2
4,922,860	+				-1.2
4,922,860	+				-2.8
4,922,860	+				-3.5
4,922,860	+				-1.8
4,922,860	+				-3.4
4,922,860	+				-1.8
4,922,860	+				-1.3
4,922,860	+				-3.3
4,922,861	-				-1.1
4,922,861	-				+0.9
4,922,861	-				-0.6
4,922,861	-				-4.6
4,922,861	-				-4.3
4,922,861	-				-3.3
4,922,861	-				-3.0
4,922,861	-				-2.1
4,922,861	-				-2.1
4,922,861	-				-1.2
4,922,861	-				-2.9
4,922,861	-				-0.3
4,922,861	-				-2.6
4,922,861	-				-1.7
4,922,861	-				-3.4
4,922,861	-				-3.7
4,922,861	-				-1.0
4,922,861	-				-3.5
4,922,861	-				-2.4
4,922,861	-				-1.6
4,922,861	-				-2.6
4,922,861	-				-1.4
4,922,861	-				-3.1
4,922,861	-				-1.2
4,922,861	-				-1.2
4,922,861	-				-2.4
4,922,861	-				-2.8
4,922,861	-				-2.0
4,922,861	-				-3.0
4,922,861	-				-2.4
4,922,861	-				-2.5
4,922,912	+				-0.9
4,922,913	-				-1.0
4,922,925	+				+0.8
4,922,925	+				-1.2
4,922,926	-				+1.9
4,922,993	+				+0.6
4,922,993	+				-2.1
4,922,994	-				-0.3
4,922,994	-				-2.0
4,922,994	-				+0.7
4,922,994	-				+1.2
4,923,037	+				-0.4
4,923,037	+				-1.9
4,923,037	+				-0.4
4,923,038	-				-0.7
4,923,038	-				+0.4
4,923,038	-				-0.9
4,923,038	-				+1.5
4,923,038	-				-2.1
4,923,038	-				+0.2