Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS21695

Experiment: L-Valine 10 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Valine 10 mM (C)
4,887,349	+				+0.0
4,887,349	+				+1.6
4,887,349	+				-0.7
4,887,349	+				+1.4
4,887,349	+				-0.4
4,887,350	-				+2.2
4,887,350	-				-1.7
4,887,362	+				+0.6
4,887,362	+				-0.1
4,887,362	+				-0.9
4,887,362	+				+3.0
4,887,363	-				-0.3
4,887,363	-				-0.1
4,887,363	-				-1.2
4,887,363	-				+0.2
4,887,383	-				+1.2
4,887,393	-				+0.2
4,887,479	+				-0.4
4,887,479	+				+0.0
4,887,479	+				-0.5
4,887,479	+				+0.6
4,887,479	+				-1.8
4,887,480	-				-0.1
4,887,480	-				+0.7
4,887,480	-				-2.8
4,887,480	-				-1.3
4,887,480	-				+1.1
4,887,480	-				-0.4
4,887,480	-				-2.9
4,887,480	-				+0.1
4,887,480	-				-2.3
4,887,480	-				-1.2
4,887,480	-				-0.4
4,887,480	-				-1.6
4,887,667	+		PFLU_RS21680	0.70	+0.5
4,887,719	-				+1.0
4,887,729	+				-0.4
4,887,787	+				+1.9
4,887,787	+				-2.1
4,887,787	+				-0.7
4,887,787	+				+1.2
4,887,787	+				-1.2
4,887,787	+				-0.4
4,887,787	+				-0.7
4,887,787	+				+5.5
4,887,787	+				-1.5
4,887,787	+				-0.8
4,887,787	+				-1.1
4,887,788	-				+0.1
4,887,788	-				+2.1
4,887,788	-				-1.9
4,887,788	-				-1.1
4,887,907	+		PFLU_RS21685	0.61	-0.5
4,887,907	+		PFLU_RS21685	0.61	+1.3
4,887,907	+		PFLU_RS21685	0.61	+0.1
4,887,907	+		PFLU_RS21685	0.61	+0.7
4,887,907	+		PFLU_RS21685	0.61	+0.3
4,887,907	+		PFLU_RS21685	0.61	-1.1
4,887,907	+		PFLU_RS21685	0.61	+3.5
4,887,907	+		PFLU_RS21685	0.61	-0.2
4,887,907	+		PFLU_RS21685	0.61	-1.1
4,887,907	+		PFLU_RS21685	0.61	+0.3
4,887,907	+		PFLU_RS21685	0.61	-0.5
4,887,907	+		PFLU_RS21685	0.61	-0.8
4,887,907	+		PFLU_RS21685	0.61	+2.9
4,887,907	+		PFLU_RS21685	0.61	-0.6
4,887,907	+		PFLU_RS21685	0.61	-0.8
4,887,907	+		PFLU_RS21685	0.61	-0.1
4,887,907	+		PFLU_RS21685	0.61	+2.2
4,887,907	+		PFLU_RS21685	0.61	-2.0
4,887,907	+		PFLU_RS21685	0.61	+2.7
4,887,907	+		PFLU_RS21685	0.61	+0.9
4,887,908	-		PFLU_RS21685	0.62	+2.8
4,887,908	-		PFLU_RS21685	0.62	-1.2
4,887,908	-		PFLU_RS21685	0.62	-0.8
4,887,908	-		PFLU_RS21685	0.62	+2.7
4,887,908	-		PFLU_RS21685	0.62	-1.8
4,887,908	-		PFLU_RS21685	0.62	-1.1
4,887,908	-		PFLU_RS21685	0.62	-1.1
4,887,908	-		PFLU_RS21685	0.62	+2.0
4,887,908	-		PFLU_RS21685	0.62	+0.3
4,887,908	-		PFLU_RS21685	0.62	-0.1
4,887,908	-		PFLU_RS21685	0.62	+2.1
4,887,908	-		PFLU_RS21685	0.62	-0.8
4,887,908	-		PFLU_RS21685	0.62	-1.1
4,887,908	-		PFLU_RS21685	0.62	+2.5
4,887,908	-		PFLU_RS21685	0.62	-1.1
4,887,908	-		PFLU_RS21685	0.62	+0.1
4,887,908	-		PFLU_RS21685	0.62	+0.8
4,887,908	-		PFLU_RS21685	0.62	-1.7
4,887,908	-		PFLU_RS21685	0.62	+1.9
4,887,908	-		PFLU_RS21685	0.62	-0.4
4,887,933	+		PFLU_RS21685	0.74	-0.8
4,887,933	+		PFLU_RS21685	0.74	+3.0
4,887,933	+		PFLU_RS21685	0.74	+2.5
4,887,934	-		PFLU_RS21685	0.75	-1.8
4,887,934	-		PFLU_RS21685	0.75	-0.4
4,887,934	-		PFLU_RS21685	0.75	-2.1
4,887,957	+		PFLU_RS21685	0.86	-2.2
4,888,023	+				+2.8
4,888,024	-				-1.2
4,888,024	-				+0.1
4,888,184	+		PFLU_RS21690	0.85	+1.5
4,888,184	+		PFLU_RS21690	0.85	+1.2
4,888,184	+		PFLU_RS21690	0.85	+0.6
4,888,184	+		PFLU_RS21690	0.85	-0.1
4,888,184	+		PFLU_RS21690	0.85	+1.3
4,888,184	+		PFLU_RS21690	0.85	-1.2
4,888,185	-		PFLU_RS21690	0.85	+0.3
4,888,185	-		PFLU_RS21690	0.85	-0.4
4,888,203	+				+1.6
4,888,204	-				-0.9
4,888,204	-				-0.8
4,888,204	-				-1.1
4,888,204	-				+0.6
4,888,238	+				+2.3
4,888,238	+				-2.7
4,888,239	-				-1.5
4,888,263	+				+0.9
4,888,263	+				-1.1
4,888,263	+				-0.6
4,888,263	+				-1.8
4,888,264	-				-3.8
4,888,264	-				-2.4
4,888,264	-				-0.4
4,888,264	-				-1.2
4,888,266	+				-0.1
4,888,266	+				-1.1
4,888,266	+				+2.6
4,888,266	+				+1.8
4,888,266	+				-0.7
4,888,266	+				-0.9
4,888,266	+				+1.5
4,888,266	+				+0.4
4,888,266	+				+1.9
4,888,266	+				+0.9
4,888,266	+				-1.2
4,888,266	+				+0.0
4,888,266	+				+1.2
4,888,267	-				-1.7
4,888,267	-				+1.3
4,888,267	-				-2.7
4,888,267	-				-1.9
4,888,267	-				-2.6
4,888,267	-				-1.3
4,888,267	-				-0.7
4,888,267	-				+0.1
4,888,267	-				-1.8
4,888,267	-				-0.3
4,888,293	-				-2.6
4,888,311	+				+1.2
4,888,439	+				-4.2
4,888,439	+				-2.9
4,888,439	+				-3.2
4,888,439	+				-2.7
4,888,440	-				-2.5
4,888,445	+				-0.8
4,888,445	+				+0.5
4,888,445	+				+2.4
4,888,445	+				-2.9
4,888,445	+				-2.4
4,888,446	-				-1.6
4,888,446	-				-2.5
4,888,446	-				-3.3
4,888,446	-				-3.7
4,888,446	-				-2.6
4,888,446	-				-2.1
4,888,446	-				-5.1
4,888,453	+				-1.4
4,888,453	+				-2.2
4,888,453	+				-1.8
4,888,453	+				-1.4
4,888,453	+				-1.0
4,888,454	-				-2.0
4,888,472	+		PFLU_RS21695	0.11	-2.8
4,888,472	+		PFLU_RS21695	0.11	-3.5
4,888,472	+		PFLU_RS21695	0.11	-4.4
4,888,472	+		PFLU_RS21695	0.11	-3.4
4,888,472	+		PFLU_RS21695	0.11	-3.5
4,888,473	-		PFLU_RS21695	0.11	-4.8
4,888,511	+		PFLU_RS21695	0.14	-0.0
4,888,511	+		PFLU_RS21695	0.14	-2.0
4,888,511	+		PFLU_RS21695	0.14	-1.7
4,888,594	-		PFLU_RS21695	0.22	-0.6
4,888,646	+		PFLU_RS21695	0.26	-1.2
4,888,647	-		PFLU_RS21695	0.26	+4.5
4,888,647	-		PFLU_RS21695	0.26	-3.2
4,888,665	-		PFLU_RS21695	0.28	-1.0
4,889,079	+		PFLU_RS21695	0.64	-1.3
4,889,240	+		PFLU_RS21695	0.78	-3.0
4,889,241	-		PFLU_RS21695	0.79	-1.4
4,889,241	-		PFLU_RS21695	0.79	-1.5
4,889,336	+		PFLU_RS21695	0.87	-1.8
4,889,336	+		PFLU_RS21695	0.87	-2.1
4,889,336	+		PFLU_RS21695	0.87	-2.7
4,889,336	+		PFLU_RS21695	0.87	-1.9
4,889,379	+				-3.8
4,889,512	+				-1.4
4,889,512	+				-1.1
4,889,512	+				-2.0
4,889,512	+				-1.4
4,889,512	+				-1.2
4,889,512	+				-1.5
4,889,512	+				-1.6
4,889,512	+				-3.0
4,889,512	+				+0.9
4,889,512	+				-1.7
4,889,512	+				+0.7
4,889,512	+				+0.5
4,889,512	+				-0.7
4,889,512	+				-1.0
4,889,512	+				-2.1
4,889,512	+				-2.9
4,889,512	+				-1.7
4,889,512	+				-3.0
4,889,512	+				-3.1
4,889,512	+				-2.6
4,889,513	-				-1.5
4,889,513	-				+3.3
4,889,513	-				-1.8
4,889,513	-				-2.8
4,889,513	-				+0.8
4,889,513	-				-1.7
4,889,513	-				-0.1
4,889,513	-				+0.2
4,889,513	-				+0.4
4,889,513	-				+1.5
4,889,513	-				+1.5
4,889,513	-				+2.3
4,889,513	-				-0.1
4,889,513	-				-0.8
4,889,513	-				+1.1
4,889,546	+				+0.9
4,889,547	-				-3.0
4,889,547	-				+0.7
4,889,656	+		PFLU_RS21700	0.21	-4.2
4,889,657	-		PFLU_RS21700	0.22	-1.2
4,889,657	-		PFLU_RS21700	0.22	-3.2
4,889,670	+		PFLU_RS21700	0.23	-1.8
4,889,671	-		PFLU_RS21700	0.23	+0.4
4,889,691	+		PFLU_RS21700	0.26	-2.0
4,889,691	+		PFLU_RS21700	0.26	-3.8
4,890,114	+		PFLU_RS21700	0.80	-2.4
4,890,114	+		PFLU_RS21700	0.80	-2.6
4,890,114	+		PFLU_RS21700	0.80	-4.4
4,890,114	+		PFLU_RS21700	0.80	-1.3
4,890,115	-		PFLU_RS21700	0.80	-1.6
4,890,117	+		PFLU_RS21700	0.80	-1.7
4,890,117	+		PFLU_RS21700	0.80	-3.8
4,890,117	+		PFLU_RS21700	0.80	-1.3
4,890,131	+		PFLU_RS21700	0.82	+0.1
4,890,131	+		PFLU_RS21700	0.82	-0.2
4,890,131	+		PFLU_RS21700	0.82	-2.6
4,890,131	+		PFLU_RS21700	0.82	-2.0
4,890,132	-		PFLU_RS21700	0.82	-3.0
4,890,132	-		PFLU_RS21700	0.82	-1.4
4,890,132	-		PFLU_RS21700	0.82	-0.7
4,890,298	+				-1.6
4,890,298	+				+0.7
4,890,299	-				-1.1
4,890,299	-				-2.8
4,890,306	+		PFLU_RS21705	0.10	-3.8
4,890,306	+		PFLU_RS21705	0.10	-3.6
4,890,321	+		PFLU_RS21705	0.16	-1.5
4,890,321	+		PFLU_RS21705	0.16	-1.0
4,890,321	+		PFLU_RS21705	0.16	-0.0
4,890,321	+		PFLU_RS21705	0.16	-2.1
4,890,321	+		PFLU_RS21705	0.16	-1.5
4,890,321	+		PFLU_RS21705	0.16	-2.5
4,890,321	+		PFLU_RS21705	0.16	-4.0
4,890,321	+		PFLU_RS21705	0.16	-4.1
4,890,321	+		PFLU_RS21705	0.16	-2.0
4,890,321	+		PFLU_RS21705	0.16	-1.6
4,890,321	+		PFLU_RS21705	0.16	+1.4
4,890,321	+		PFLU_RS21705	0.16	-2.7
4,890,321	+		PFLU_RS21705	0.16	-2.6
4,890,322	-		PFLU_RS21705	0.16	-2.2
4,890,322	-		PFLU_RS21705	0.16	-1.3
4,890,322	-		PFLU_RS21705	0.16	-2.6
4,890,322	-		PFLU_RS21705	0.16	-1.3
4,890,322	-		PFLU_RS21705	0.16	-2.4
4,890,322	-		PFLU_RS21705	0.16	-1.9
4,890,322	-		PFLU_RS21705	0.16	-2.3
4,890,322	-		PFLU_RS21705	0.16	-3.0
4,890,322	-		PFLU_RS21705	0.16	-2.2
4,890,322	-		PFLU_RS21705	0.16	-0.6
4,890,322	-		PFLU_RS21705	0.16	-2.8
4,890,322	-		PFLU_RS21705	0.16	-3.3