Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS06045

Experiment: L-Valine 10 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Valine 10 mM (C)
1,354,674	-		PFLU_RS06040	0.22	+1.0
1,354,734	+		PFLU_RS06040	0.26	-0.5
1,354,734	+		PFLU_RS06040	0.26	-0.3
1,354,734	+		PFLU_RS06040	0.26	-1.5
1,354,734	+		PFLU_RS06040	0.26	+1.5
1,354,734	+		PFLU_RS06040	0.26	+1.3
1,354,789	+		PFLU_RS06040	0.31	+2.2
1,354,789	+		PFLU_RS06040	0.31	+2.4
1,354,790	-		PFLU_RS06040	0.31	-1.4
1,354,790	-		PFLU_RS06040	0.31	-1.1
1,354,790	-		PFLU_RS06040	0.31	-0.6
1,354,790	-		PFLU_RS06040	0.31	+0.3
1,354,871	+		PFLU_RS06040	0.37	-1.1
1,354,872	-		PFLU_RS06040	0.37	+0.3
1,354,903	-		PFLU_RS06040	0.40	-0.4
1,354,988	+		PFLU_RS06040	0.47	-2.4
1,355,001	+		PFLU_RS06040	0.48	-0.6
1,355,001	+		PFLU_RS06040	0.48	-1.9
1,355,002	-		PFLU_RS06040	0.48	-1.4
1,355,002	-		PFLU_RS06040	0.48	-0.9
1,355,002	-		PFLU_RS06040	0.48	+0.4
1,355,034	+		PFLU_RS06040	0.50	-3.0
1,355,034	+		PFLU_RS06040	0.50	-0.1
1,355,034	+		PFLU_RS06040	0.50	-1.1
1,355,035	-		PFLU_RS06040	0.50	+1.0
1,355,035	-		PFLU_RS06040	0.50	-0.6
1,355,035	-		PFLU_RS06040	0.50	-0.5
1,355,035	-		PFLU_RS06040	0.50	-0.3
1,355,222	+		PFLU_RS06040	0.65	-1.7
1,355,224	+		PFLU_RS06040	0.65	-0.0
1,355,224	+		PFLU_RS06040	0.65	-1.5
1,355,273	+		PFLU_RS06040	0.69	-1.6
1,355,273	+		PFLU_RS06040	0.69	+1.6
1,355,312	-		PFLU_RS06040	0.72	+0.8
1,355,415	+		PFLU_RS06040	0.80	+2.8
1,355,415	+		PFLU_RS06040	0.80	-0.6
1,355,415	+		PFLU_RS06040	0.80	+0.0
1,355,415	+		PFLU_RS06040	0.80	-1.0
1,355,415	+		PFLU_RS06040	0.80	+0.2
1,355,415	+		PFLU_RS06040	0.80	-2.6
1,355,415	+		PFLU_RS06040	0.80	-1.8
1,355,416	-		PFLU_RS06040	0.81	-2.3
1,355,416	-		PFLU_RS06040	0.81	-0.5
1,355,416	-		PFLU_RS06040	0.81	-0.7
1,355,416	-		PFLU_RS06040	0.81	+0.2
1,355,416	-		PFLU_RS06040	0.81	+0.4
1,355,416	-		PFLU_RS06040	0.81	-1.8
1,355,416	-		PFLU_RS06040	0.81	+0.6
1,355,452	-		PFLU_RS06040	0.83	-0.1
1,355,505	+		PFLU_RS06040	0.88	+3.0
1,355,505	+		PFLU_RS06040	0.88	-2.4
1,355,505	+		PFLU_RS06040	0.88	-0.6
1,355,505	+		PFLU_RS06040	0.88	-1.0
1,355,505	+		PFLU_RS06040	0.88	+0.6
1,355,505	+		PFLU_RS06040	0.88	+0.4
1,355,505	+		PFLU_RS06040	0.88	-0.4
1,355,506	-		PFLU_RS06040	0.88	-0.3
1,355,506	-		PFLU_RS06040	0.88	+1.0
1,355,523	+		PFLU_RS06040	0.89	+1.3
1,355,523	+		PFLU_RS06040	0.89	+0.7
1,355,523	+		PFLU_RS06040	0.89	-0.8
1,355,523	+		PFLU_RS06040	0.89	+1.4
1,355,523	+		PFLU_RS06040	0.89	+1.4
1,355,523	+		PFLU_RS06040	0.89	-1.6
1,355,662	+				-0.6
1,355,662	+				-0.9
1,355,662	+				-1.4
1,355,662	+				-0.4
1,355,663	-				-1.0
1,355,663	-				-1.4
1,355,663	-				+0.2
1,355,663	-				+0.5
1,355,758	+		PFLU_RS06045	0.14	+2.0
1,355,758	+		PFLU_RS06045	0.14	-0.8
1,355,758	+		PFLU_RS06045	0.14	-1.1
1,355,759	-		PFLU_RS06045	0.15	+1.0
1,355,759	-		PFLU_RS06045	0.15	-0.5
1,355,759	-		PFLU_RS06045	0.15	+1.9
1,355,772	+		PFLU_RS06045	0.16	+2.6
1,355,772	+		PFLU_RS06045	0.16	-0.6
1,355,785	+		PFLU_RS06045	0.18	-1.2
1,355,786	-		PFLU_RS06045	0.18	-0.0
1,355,786	-		PFLU_RS06045	0.18	-3.3
1,355,810	+		PFLU_RS06045	0.22	+2.2
1,355,810	+		PFLU_RS06045	0.22	-0.7
1,355,811	-		PFLU_RS06045	0.22	+0.7
1,355,953	+		PFLU_RS06045	0.42	-1.1
1,355,954	-		PFLU_RS06045	0.42	-1.1
1,355,954	-		PFLU_RS06045	0.42	-0.0
1,355,954	-		PFLU_RS06045	0.42	+0.5
1,356,276	+		PFLU_RS06045	0.89	-0.1
1,356,276	+		PFLU_RS06045	0.89	-1.4
1,356,276	+		PFLU_RS06045	0.89	-0.7
1,356,276	+		PFLU_RS06045	0.89	-0.8
1,356,276	+		PFLU_RS06045	0.89	-0.0
1,356,276	+		PFLU_RS06045	0.89	-0.8
1,356,276	+		PFLU_RS06045	0.89	+0.8
1,356,276	+		PFLU_RS06045	0.89	-0.0
1,356,277	-		PFLU_RS06045	0.89	+0.4
1,356,277	-		PFLU_RS06045	0.89	-1.0
1,356,277	-		PFLU_RS06045	0.89	-0.6
1,356,277	-		PFLU_RS06045	0.89	-2.3
1,356,277	-		PFLU_RS06045	0.89	-1.7
1,356,277	-		PFLU_RS06045	0.89	+1.1
1,356,277	-		PFLU_RS06045	0.89	-1.7
1,356,277	-		PFLU_RS06045	0.89	+2.2
1,356,604	+		PFLU_RS06050	0.11	-1.2
1,356,605	-		PFLU_RS06050	0.11	-0.5
1,356,605	-		PFLU_RS06050	0.11	-1.7
1,356,605	-		PFLU_RS06050	0.11	+3.4
1,356,621	+		PFLU_RS06050	0.12	-0.2
1,356,621	+		PFLU_RS06050	0.12	-1.4
1,356,621	+		PFLU_RS06050	0.12	-2.6
1,356,621	+		PFLU_RS06050	0.12	-1.2
1,356,621	+		PFLU_RS06050	0.12	-0.3
1,356,621	+		PFLU_RS06050	0.12	-0.4
1,356,622	-		PFLU_RS06050	0.12	+0.4
1,356,706	+		PFLU_RS06050	0.16	-1.2
1,356,706	+		PFLU_RS06050	0.16	-1.7
1,356,707	-		PFLU_RS06050	0.16	+2.5
1,356,707	-		PFLU_RS06050	0.16	-0.3
1,356,707	-		PFLU_RS06050	0.16	+0.7
1,356,707	-		PFLU_RS06050	0.16	-0.8
1,356,707	-		PFLU_RS06050	0.16	+1.4
1,356,707	-		PFLU_RS06050	0.16	+0.7
1,356,882	-		PFLU_RS06050	0.23	+1.0
1,356,882	-		PFLU_RS06050	0.23	-1.8
1,356,964	+		PFLU_RS06050	0.27	-0.6
1,356,964	+		PFLU_RS06050	0.27	-1.2
1,356,965	-		PFLU_RS06050	0.27	-0.6
1,357,011	-		PFLU_RS06050	0.29	-1.6
1,357,024	-		PFLU_RS06050	0.30	+0.6
1,357,186	+		PFLU_RS06050	0.37	+0.7
1,357,186	+		PFLU_RS06050	0.37	-1.2
1,357,186	+		PFLU_RS06050	0.37	-1.0
1,357,186	+		PFLU_RS06050	0.37	+2.4
1,357,186	+		PFLU_RS06050	0.37	-1.4
1,357,186	+		PFLU_RS06050	0.37	-2.8
1,357,186	+		PFLU_RS06050	0.37	-0.8
1,357,186	+		PFLU_RS06050	0.37	-0.0
1,357,186	+		PFLU_RS06050	0.37	+0.2
1,357,186	+		PFLU_RS06050	0.37	+1.0
1,357,186	+		PFLU_RS06050	0.37	+0.2
1,357,186	+		PFLU_RS06050	0.37	+1.0
1,357,186	+		PFLU_RS06050	0.37	+2.6
1,357,186	+		PFLU_RS06050	0.37	-0.8
1,357,186	+		PFLU_RS06050	0.37	+2.0
1,357,186	+		PFLU_RS06050	0.37	-0.8
1,357,186	+		PFLU_RS06050	0.37	+0.8
1,357,186	+		PFLU_RS06050	0.37	+2.0
1,357,186	+		PFLU_RS06050	0.37	-0.1
1,357,186	+		PFLU_RS06050	0.37	-0.6
1,357,186	+		PFLU_RS06050	0.37	+1.0
1,357,187	-		PFLU_RS06050	0.37	+0.2
1,357,187	-		PFLU_RS06050	0.37	+0.4
1,357,187	-		PFLU_RS06050	0.37	+0.1
1,357,187	-		PFLU_RS06050	0.37	+0.2
1,357,187	-		PFLU_RS06050	0.37	-0.2
1,357,187	-		PFLU_RS06050	0.37	-0.7
1,357,187	-		PFLU_RS06050	0.37	+2.4
1,357,187	-		PFLU_RS06050	0.37	+0.2
1,357,187	-		PFLU_RS06050	0.37	-0.6
1,357,187	-		PFLU_RS06050	0.37	+0.5
1,357,187	-		PFLU_RS06050	0.37	+2.5
1,357,187	-		PFLU_RS06050	0.37	-2.2
1,357,187	-		PFLU_RS06050	0.37	+0.6
1,357,187	-		PFLU_RS06050	0.37	-1.6
1,357,229	+		PFLU_RS06050	0.39	+1.2
1,357,229	+		PFLU_RS06050	0.39	-1.2
1,357,229	+		PFLU_RS06050	0.39	-1.5
1,357,229	+		PFLU_RS06050	0.39	-0.6
1,357,229	+		PFLU_RS06050	0.39	+1.6
1,357,229	+		PFLU_RS06050	0.39	+1.0
1,357,229	+		PFLU_RS06050	0.39	+0.2
1,357,230	-		PFLU_RS06050	0.39	-0.9
1,357,230	-		PFLU_RS06050	0.39	+0.4
1,357,230	-		PFLU_RS06050	0.39	+0.2
1,357,230	-		PFLU_RS06050	0.39	-1.4
1,357,331	+		PFLU_RS06050	0.43	+0.4
1,357,331	+		PFLU_RS06050	0.43	+0.2
1,357,331	+		PFLU_RS06050	0.43	-0.9
1,357,331	+		PFLU_RS06050	0.43	-1.7
1,357,332	-		PFLU_RS06050	0.43	+0.5
1,357,332	-		PFLU_RS06050	0.43	-1.3
1,357,332	-		PFLU_RS06050	0.43	-0.1
1,357,332	-		PFLU_RS06050	0.43	+1.6
1,357,332	-		PFLU_RS06050	0.43	-1.1
1,357,332	-		PFLU_RS06050	0.43	+0.4
1,357,332	-		PFLU_RS06050	0.43	-1.6
1,357,332	-		PFLU_RS06050	0.43	-1.9